RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 SIRT1Q96EB6 747 aa12.76□□□□□ -0.37
CDK4-213ENST00000552713 BTG4Q9NY30 223 aa12.76□□□□□ -0.37
CDK4-213ENST00000552713 ARHGEF10O15013 1369 aa12.76□□□□□ -0.37
CDK4-213ENST00000552713 R3HDM1Q15032 1099 aaKnown RBP12.75□□□□□ -0.37
CDK4-213ENST00000552713 CFAP70Q5T0N1 1121 aa12.75□□□□□ -0.37
CDK4-213ENST00000552713 C14orf93Q9H972 538 aaKnown RBP12.75□□□□□ -0.37
CDK4-213ENST00000552713 PRAM1Q96QH2 718 aa12.74□□□□□ -0.37
CDK4-213ENST00000552713 EZH2Q15910 746 aaKnown RBP12.73□□□□□ -0.37
CDK4-213ENST00000552713 ADGRB2O60241 1585 aa12.73□□□□□ -0.37
CDK4-213ENST00000552713 SPATA31A5Q5VU36 1347 aa12.72□□□□□ -0.37
CDK4-213ENST00000552713 SPATA31A7Q8IWB4 1347 aa12.72□□□□□ -0.37
CDK4-213ENST00000552713 MPHOSPH9Q99550 1183 aa12.72□□□□□ -0.37
CDK4-213ENST00000552713 DISP2A7MBM2 1401 aa12.71□□□□□ -0.37
CDK4-213ENST00000552713 DHX57Q6P158 1386 aaKnown RBP12.71□□□□□ -0.37
CDK4-213ENST00000552713 PRR36Q9H6K5 1346 aa12.71□□□□□ -0.37
CDK4-213ENST00000552713 NUP188Q5SRE5 1749 aa12.71□□□□□ -0.38
CDK4-213ENST00000552713 ANKARQ7Z5J8 1434 aa12.71□□□□□ -0.38
CDK4-213ENST00000552713 RREB1Q92766 1687 aa12.7□□□□□ -0.38
CDK4-213ENST00000552713 POTEHQ6S545 545 aa12.7□□□□□ -0.38
CDK4-213ENST00000552713 HIRIP3Q9BW71 556 aaPredicted RBP12.7□□□□□ -0.38
CDK4-213ENST00000552713 DLC1Q96QB1 1528 aa12.7□□□□□ -0.38
CDK4-213ENST00000552713 CAMKK2Q96RR4 588 aa12.69□□□□□ -0.38
CDK4-213ENST00000552713 PHRF1Q9P1Y6 1649 aaKnown RBP12.69□□□□□ -0.38
CDK4-213ENST00000552713 ADGRB1O14514 1584 aa12.69□□□□□ -0.38
CDK4-213ENST00000552713 ACIN1Q9UKV3 1341 aaKnown RBP12.68□□□□□ -0.38
CDK4-213ENST00000552713 TRIM37O94972 964 aa12.68□□□□□ -0.38
CDK4-213ENST00000552713 POGKQ9P215 609 aa12.68□□□□□ -0.38
CDK4-213ENST00000552713 MINK1Q8N4C8 1332 aaPredicted RBP12.67□□□□□ -0.38
CDK4-213ENST00000552713 TULP4Q9NRJ4 1543 aa12.67□□□□□ -0.38
CDK4-213ENST00000552713 SPATA31A1Q5TZJ5 1347 aa12.66□□□□□ -0.38
CDK4-213ENST00000552713 CHRNA2Q15822 529 aa12.66□□□□□ -0.38
CDK4-213ENST00000552713 PRDM11Q9NQV5 511 aa12.66□□□□□ -0.38
CDK4-213ENST00000552713 TRAK1Q9UPV9 953 aa12.66□□□□□ -0.38
CDK4-213ENST00000552713 GPRASP1Q5JY77 1395 aa12.66□□□□□ -0.38
CDK4-213ENST00000552713 KIAA0232Q92628 1395 aa12.65□□□□□ -0.38
CDK4-213ENST00000552713 ITSN1Q15811 1721 aa12.65□□□□□ -0.38
CDK4-213ENST00000552713 PAK3O75914 559 aaPredicted RBP12.64□□□□□ -0.39
CDK4-213ENST00000552713 APBA3O96018 575 aa12.64□□□□□ -0.39
CDK4-213ENST00000552713 STRN4Q9NRL3 753 aa12.64□□□□□ -0.39
CDK4-213ENST00000552713 ARHGEF28Q8N1W1 1705 aaKnown RBP12.63□□□□□ -0.39
CDK4-213ENST00000552713 SBF2Q86WG5 1849 aa12.63□□□□□ -0.39
CDK4-213ENST00000552713 FAM196AQ6ZSG2 479 aa12.63□□□□□ -0.39
CDK4-213ENST00000552713 CAMTA1Q9Y6Y1 1673 aa12.63□□□□□ -0.39
CDK4-213ENST00000552713 WASLO00401 505 aaPredicted RBP12.62□□□□□ -0.39
CDK4-213ENST00000552713 ZC3H6P61129 1189 aaKnown RBP12.62□□□□□ -0.39
CDK4-213ENST00000552713 NUTM2GQ5VZR2 741 aa12.62□□□□□ -0.39
CDK4-213ENST00000552713 NGDNQ8NEJ9 315 aaKnown RBP12.62□□□□□ -0.39
CDK4-213ENST00000552713 USP35Q9P2H5 1018 aa12.62□□□□□ -0.39
CDK4-213ENST00000552713 ATP7BP35670 1465 aa12.61□□□□□ -0.39
CDK4-213ENST00000552713 YY1P25490 414 aa12.61□□□□□ -0.39
CDK4-213ENST00000552713 LMO7Q8WWI1 1683 aa12.61□□□□□ -0.39
CDK4-213ENST00000552713 TOPAZ1Q8N9V7 1692 aa12.6□□□□□ -0.39
CDK4-213ENST00000552713 NRKQ7Z2Y5 1582 aa12.6□□□□□ -0.39
CDK4-213ENST00000552713 PARD3Q8TEW0 1356 aa12.59□□□□□ -0.39
CDK4-213ENST00000552713 SSH2Q76I76 1423 aa12.59□□□□□ -0.39
CDK4-213ENST00000552713 PARP4Q9UKK3 1724 aaKnown RBP12.59□□□□□ -0.39
CDK4-213ENST00000552713 EIF3AQ14152 1382 aaKnown RBP12.58□□□□□ -0.4
CDK4-213ENST00000552713 LARP1Q6PKG0 1096 aaKnown RBP12.58□□□□□ -0.4
CDK4-213ENST00000552713 BARGINQ6ZT62 677 aa12.58□□□□□ -0.4
CDK4-213ENST00000552713 NUDT16Q96DE0 195 aaKnown RBP12.58□□□□□ -0.4
CDK4-213ENST00000552713 PEAK1Q9H792 1746 aa12.58□□□□□ -0.4
CDK4-213ENST00000552713 KDM2AQ9Y2K7 1162 aa12.58□□□□□ -0.4
CDK4-213ENST00000552713 CASZ1Q86V15 1759 aa12.56□□□□□ -0.4
CDK4-213ENST00000552713 PDE3BQ13370 1112 aa12.56□□□□□ -0.4
CDK4-213ENST00000552713 EVA1CP58658 441 aa12.55□□□□□ -0.4
CDK4-213ENST00000552713 NBPF8Q3BBV2 869 aa12.55□□□□□ -0.4
CDK4-213ENST00000552713 NBPF14Q5TI25 921 aa12.55□□□□□ -0.4
CDK4-213ENST00000552713 RGPD3A6NKT7 1758 aaPredicted RBP12.54□□□□□ -0.4
CDK4-213ENST00000552713 RGPD4Q7Z3J3 1758 aa12.54□□□□□ -0.4
CDK4-213ENST00000552713 KCNQ2O43526 872 aa12.54□□□□□ -0.4
CDK4-213ENST00000552713 TCP11L2Q8N4U5 519 aa12.54□□□□□ -0.4
CDK4-213ENST00000552713 DCAF11Q8TEB1 546 aa12.54□□□□□ -0.4
CDK4-213ENST00000552713 SPON1Q9HCB6 807 aa12.54□□□□□ -0.4
CDK4-213ENST00000552713 ACEP12821 1306 aa12.54□□□□□ -0.4
CDK4-213ENST00000552713 POLR3AO14802 1390 aaPredicted RBP12.54□□□□□ -0.4
CDK4-213ENST00000552713 RGPD5Q99666 1765 aa12.53□□□□□ -0.4
CDK4-213ENST00000552713 WNK3Q9BYP7 1800 aa12.53□□□□□ -0.4
CDK4-213ENST00000552713 LRRC37A3O60309 1634 aa12.53□□□□□ -0.4
CDK4-213ENST00000552713 PTF1AQ7RTS3 328 aa12.53□□□□□ -0.4
CDK4-213ENST00000552713 CDK19Q9BWU1 502 aa12.53□□□□□ -0.4
CDK4-213ENST00000552713 PDGFDQ9GZP0 370 aaPredicted RBP12.53□□□□□ -0.4
CDK4-213ENST00000552713 PPP1R1BQ9UD71 204 aaPredicted RBP12.53□□□□□ -0.4
CDK4-213ENST00000552713 CHD4Q14839 1912 aa12.52□□□□□ -0.4
CDK4-213ENST00000552713 MYOM1P52179 1685 aa12.52□□□□□ -0.4
CDK4-213ENST00000552713 ANO8Q9HCE9 1232 aaPredicted RBP12.52□□□□□ -0.41
CDK4-213ENST00000552713 CPDO75976 1380 aa12.52□□□□□ -0.41
CDK4-213ENST00000552713 COL5A2P05997 1499 aaPredicted RBP12.52□□□□□ -0.41
CDK4-213ENST00000552713 COL18A1P39060 1754 aa12.51□□□□□ -0.41
CDK4-213ENST00000552713 AKAP12Q02952 1782 aa12.51□□□□□ -0.41
CDK4-213ENST00000552713 ABTB2Q8N961 1025 aa12.51□□□□□ -0.41
CDK4-213ENST00000552713 USP19O94966 1318 aa12.51□□□□□ -0.41
CDK4-213ENST00000552713 NINLQ9Y2I6 1382 aa12.51□□□□□ -0.41
CDK4-213ENST00000552713 RAB3GAP2Q9H2M9 1393 aa12.5□□□□□ -0.41
CDK4-213ENST00000552713 PLEKHG3A1L390 1219 aa12.49□□□□□ -0.41
CDK4-213ENST00000552713 KAT6BQ8WYB5 2073 aa12.49□□□□□ -0.41
CDK4-213ENST00000552713 OVOS2A0A0G2JMS6 1433 aa12.48□□□□□ -0.41
CDK4-213ENST00000552713 OVOS2A0A0J9YW53 1432 aa12.48□□□□□ -0.41
CDK4-213ENST00000552713 OVOS2Q6IE36 1432 aa12.48□□□□□ -0.41
CDK4-213ENST00000552713 GCP02774 474 aa12.48□□□□□ -0.41
CDK4-213ENST00000552713 PROM2Q8N271 834 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms