RNA–Protein interactions for RNA: ENST00000552691.1

ERBB3-220, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 3

Gene ERBB3, Length 291 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-220ENST00000552691 RGPD5Q99666 1765 aa5.82□□□□□ -1.48
ERBB3-220ENST00000552691 SSH2Q76I76 1423 aa5.82□□□□□ -1.48
ERBB3-220ENST00000552691 CGNL1Q0VF96 1302 aa5.81□□□□□ -1.48
ERBB3-220ENST00000552691 NPHP3Q7Z494 1330 aa5.81□□□□□ -1.48
ERBB3-220ENST00000552691 TTC21BQ7Z4L5 1316 aa5.81□□□□□ -1.48
ERBB3-220ENST00000552691 LTN1O94822 1766 aa5.81□□□□□ -1.48
ERBB3-220ENST00000552691 UBAP1LF5GYI3 381 aa5.81□□□□□ -1.48
ERBB3-220ENST00000552691 FYB1O15117 783 aa5.81□□□□□ -1.48
ERBB3-220ENST00000552691 XPCQ01831 940 aaPredicted RBP5.81□□□□□ -1.48
ERBB3-220ENST00000552691 AMER1Q5JTC6 1135 aaPredicted RBP5.81□□□□□ -1.48
ERBB3-220ENST00000552691 KRT28Q7Z3Y7 464 aa5.81□□□□□ -1.48
ERBB3-220ENST00000552691 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.81□□□□□ -1.48
ERBB3-220ENST00000552691 DDX17Q92841 729 aaKnown RBP5.81□□□□□ -1.48
ERBB3-220ENST00000552691 CRYBG1Q9Y4K1 1723 aa5.81□□□□□ -1.48
ERBB3-220ENST00000552691 PXDNQ92626 1479 aa5.81□□□□□ -1.48
ERBB3-220ENST00000552691 AHDC1Q5TGY3 1603 aaPredicted RBP5.81□□□□□ -1.48
ERBB3-220ENST00000552691 BRD4O60885 1362 aaPredicted RBP5.8□□□□□ -1.48
ERBB3-220ENST00000552691 NPC1L1Q9UHC9 1359 aa5.8□□□□□ -1.48
ERBB3-220ENST00000552691 TTC21AQ8NDW8 1320 aa5.8□□□□□ -1.48
ERBB3-220ENST00000552691 PAK3O75914 559 aaPredicted RBP5.8□□□□□ -1.48
ERBB3-220ENST00000552691 PIP4K2BP78356 416 aa5.8□□□□□ -1.48
ERBB3-220ENST00000552691 CNGB1Q14028 1251 aaPredicted RBP5.8□□□□□ -1.48
ERBB3-220ENST00000552691 CC2D1BQ5T0F9 858 aaKnown RBP5.8□□□□□ -1.48
ERBB3-220ENST00000552691 ABCA3Q99758 1704 aa5.79□□□□□ -1.48
ERBB3-220ENST00000552691 SOS2Q07890 1332 aaPredicted RBP5.79□□□□□ -1.48
ERBB3-220ENST00000552691 COL16A1Q07092 1604 aaPredicted RBP5.79□□□□□ -1.48
ERBB3-220ENST00000552691 PHRF1Q9P1Y6 1649 aaKnown RBP5.79□□□□□ -1.48
ERBB3-220ENST00000552691 ANP32CO43423 234 aa5.79□□□□□ -1.48
ERBB3-220ENST00000552691 NME9Q86XW9 330 aa5.79□□□□□ -1.48
ERBB3-220ENST00000552691 ABTB2Q8N961 1025 aa5.79□□□□□ -1.48
ERBB3-220ENST00000552691 GGNBP2Q9H3C7 697 aa5.79□□□□□ -1.48
ERBB3-220ENST00000552691 PRKRIP1Q9H875 184 aaPredicted RBP5.79□□□□□ -1.48
ERBB3-220ENST00000552691 ZRANB1Q9UGI0 708 aa5.79□□□□□ -1.48
ERBB3-220ENST00000552691 SBNO1A3KN83 1393 aa5.79□□□□□ -1.48
ERBB3-220ENST00000552691 NSD2O96028 1365 aa5.79□□□□□ -1.48
ERBB3-220ENST00000552691 SCAF1Q9H7N4 1312 aaKnown RBP5.78□□□□□ -1.48
ERBB3-220ENST00000552691 NLRP6P59044 892 aa5.78□□□□□ -1.48
ERBB3-220ENST00000552691 RALBP1Q15311 655 aa5.78□□□□□ -1.48
ERBB3-220ENST00000552691 NUTM2GQ5VZR2 741 aa5.78□□□□□ -1.48
ERBB3-220ENST00000552691 MIER1Q8N108 512 aa5.78□□□□□ -1.48
ERBB3-220ENST00000552691 SHPRHQ149N8 1683 aa5.78□□□□□ -1.48
ERBB3-220ENST00000552691 USP31Q70CQ4 1352 aa5.78□□□□□ -1.48
ERBB3-220ENST00000552691 PARD3Q8TEW0 1356 aa5.78□□□□□ -1.48
ERBB3-220ENST00000552691 RGPD2P0DJD1 1756 aa5.78□□□□□ -1.48
ERBB3-220ENST00000552691 COL22A1Q8NFW1 1626 aaPredicted RBP5.77□□□□□ -1.48
ERBB3-220ENST00000552691 SPATA31A3Q5VYP0 1347 aa5.77□□□□□ -1.49
ERBB3-220ENST00000552691 OVOS2A0A0J9YW53 1432 aa5.77□□□□□ -1.49
ERBB3-220ENST00000552691 TNS3Q68CZ2 1445 aa5.77□□□□□ -1.49
ERBB3-220ENST00000552691 OVOS2Q6IE36 1432 aa5.77□□□□□ -1.49
ERBB3-220ENST00000552691 LMOD2Q6P5Q4 547 aa5.77□□□□□ -1.49
ERBB3-220ENST00000552691 MORC1Q86VD1 984 aa5.77□□□□□ -1.49
ERBB3-220ENST00000552691 NLRP13Q86W25 1043 aa5.77□□□□□ -1.49
ERBB3-220ENST00000552691 LRRC59Q96AG4 307 aaKnown RBP5.77□□□□□ -1.49
ERBB3-220ENST00000552691 COG3Q96JB2 828 aa5.77□□□□□ -1.49
ERBB3-220ENST00000552691 MED1Q15648 1581 aaPredicted RBP5.76□□□□□ -1.49
ERBB3-220ENST00000552691 COL18A1P39060 1754 aa5.76□□□□□ -1.49
ERBB3-220ENST00000552691 SLIT3O75094 1523 aa5.76□□□□□ -1.49
ERBB3-220ENST00000552691 FBLN1P23142 703 aa5.76□□□□□ -1.49
ERBB3-220ENST00000552691 TNNT2P45379 298 aaPredicted RBP5.76□□□□□ -1.49
ERBB3-220ENST00000552691 ARHGEF10O15013 1369 aa5.76□□□□□ -1.49
ERBB3-220ENST00000552691 PEAK1Q9H792 1746 aa5.76□□□□□ -1.49
ERBB3-220ENST00000552691 MYBBP1AQ9BQG0 1328 aaKnown RBP5.75□□□□□ -1.49
ERBB3-220ENST00000552691 NFAT5O94916 1531 aa5.75□□□□□ -1.49
ERBB3-220ENST00000552691 GCP02774 474 aa5.75□□□□□ -1.49
ERBB3-220ENST00000552691 PPP2R1AP30153 589 aa5.75□□□□□ -1.49
ERBB3-220ENST00000552691 AATKQ6ZMQ8 1374 aa5.75□□□□□ -1.49
ERBB3-220ENST00000552691 KAT6BQ8WYB5 2073 aa5.75□□□□□ -1.49
ERBB3-220ENST00000552691 USP19O94966 1318 aa5.74□□□□□ -1.49
ERBB3-220ENST00000552691 VIRMAQ69YN4 1812 aaKnown RBP5.74□□□□□ -1.49
ERBB3-220ENST00000552691 SOX12O15370 315 aa5.74□□□□□ -1.49
ERBB3-220ENST00000552691 PLEKHG5O94827 1062 aa5.74□□□□□ -1.49
ERBB3-220ENST00000552691 MTHFSP49914 203 aa5.74□□□□□ -1.49
ERBB3-220ENST00000552691 RRS1Q15050 365 aaKnown RBP5.74□□□□□ -1.49
ERBB3-220ENST00000552691 CCDC184Q52MB2 194 aa5.74□□□□□ -1.49
ERBB3-220ENST00000552691 KCNH5Q8NCM2 988 aa5.74□□□□□ -1.49
ERBB3-220ENST00000552691 CABLES1Q8TDN4 633 aa5.74□□□□□ -1.49
ERBB3-220ENST00000552691 POLKQ9UBT6 870 aa5.74□□□□□ -1.49
ERBB3-220ENST00000552691 PNPLA6Q8IY17 1366 aa5.74□□□□□ -1.49
ERBB3-220ENST00000552691 DLG5Q8TDM6 1919 aa5.74□□□□□ -1.49
ERBB3-220ENST00000552691 CCER2I3L3R5 266 aa5.73□□□□□ -1.49
ERBB3-220ENST00000552691 HSPA1LP34931 641 aa5.73□□□□□ -1.49
ERBB3-220ENST00000552691 EMILIN1Q9Y6C2 1016 aa5.73□□□□□ -1.49
ERBB3-220ENST00000552691 SMG6Q86US8 1419 aaKnown RBP5.73□□□□□ -1.49
ERBB3-220ENST00000552691 MAP3K19Q56UN5 1328 aa5.73□□□□□ -1.49
ERBB3-220ENST00000552691 PLCH1Q4KWH8 1693 aa5.72□□□□□ -1.49
ERBB3-220ENST00000552691 LMO7Q8WWI1 1683 aa5.72□□□□□ -1.49
ERBB3-220ENST00000552691 FAM208AQ9UK61 1670 aaKnown RBP5.72□□□□□ -1.49
ERBB3-220ENST00000552691 JCADQ9P266 1359 aa5.72□□□□□ -1.49
ERBB3-220ENST00000552691 NWD2Q9ULI1 1742 aa5.72□□□□□ -1.49
ERBB3-220ENST00000552691 PPM1GO15355 546 aaPredicted RBP5.72□□□□□ -1.49
ERBB3-220ENST00000552691 HAP1P54257 671 aaPredicted RBP5.72□□□□□ -1.49
ERBB3-220ENST00000552691 ZC3H6P61129 1189 aaKnown RBP5.72□□□□□ -1.49
ERBB3-220ENST00000552691 ARHGEF25Q86VW2 580 aa5.72□□□□□ -1.49
ERBB3-220ENST00000552691 FBXO41Q8TF61 875 aa5.72□□□□□ -1.49
ERBB3-220ENST00000552691 COL14A1Q05707 1796 aaKnown RBP5.72□□□□□ -1.49
ERBB3-220ENST00000552691 CDK12Q9NYV4 1490 aaPredicted RBP5.71□□□□□ -1.49
ERBB3-220ENST00000552691 RGPD1P0DJD0 1748 aa5.71□□□□□ -1.49
ERBB3-220ENST00000552691 CPDO75976 1380 aa5.71□□□□□ -1.5
ERBB3-220ENST00000552691 INSRP06213 1382 aa5.71□□□□□ -1.5
ERBB3-220ENST00000552691 KIF24Q5T7B8 1368 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms