RNA–Protein interactions for RNA: ENST00000552352.1

RPH3A-223, Transcript of rabphilin 3A, human

TSL 3

Gene RPH3A, Length 2,535 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPH3A-223	ENST00000552352	TRAK1	Q9UPV9	953 aa		10.22	□□□□□ -0.77
RPH3A-223	ENST00000552352	MED14	O60244	1454 aa		10.21	□□□□□ -0.77
RPH3A-223	ENST00000552352	ATAD2	Q6PL18	1390 aa		10.21	□□□□□ -0.77
RPH3A-223	ENST00000552352	NSD3	Q9BZ95	1437 aa		10.21	□□□□□ -0.77
RPH3A-223	ENST00000552352	KNDC1	Q76NI1	1749 aa		10.21	□□□□□ -0.78
RPH3A-223	ENST00000552352	RIMS2	Q9UQ26	1411 aa		10.21	□□□□□ -0.78
RPH3A-223	ENST00000552352	FSD2	A1L4K1	749 aa		10.21	□□□□□ -0.78
RPH3A-223	ENST00000552352	GOLGA6L3	A6NEY3	463 aa		10.2	□□□□□ -0.78
RPH3A-223	ENST00000552352	CANX	P27824	592 aa	Known RBP	10.2	□□□□□ -0.78
RPH3A-223	ENST00000552352	PMFBP1	Q8TBY8	1022 aa		10.2	□□□□□ -0.78
RPH3A-223	ENST00000552352	NRXN3	Q9Y4C0	1643 aa		10.2	□□□□□ -0.78
RPH3A-223	ENST00000552352	FBXO31	Q5XUX0	539 aa	Predicted RBP	10.2	□□□□□ -0.78
RPH3A-223	ENST00000552352	TMEM132E	Q6IEE7	984 aa		10.2	□□□□□ -0.78
RPH3A-223	ENST00000552352	TBC1D2	Q9BYX2	928 aa		10.2	□□□□□ -0.78
RPH3A-223	ENST00000552352	COG6	Q9Y2V7	657 aa		10.2	□□□□□ -0.78
RPH3A-223	ENST00000552352	XRCC6	P12956	609 aa	Known RBP eCLIP	10.19	□□□□□ -0.78
RPH3A-223	ENST00000552352	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	10.19	□□□□□ -0.78
RPH3A-223	ENST00000552352	TECPR2	O15040	1411 aa		10.19	□□□□□ -0.78
RPH3A-223	ENST00000552352	ANKRD26	Q9UPS8	1709 aa		10.19	□□□□□ -0.78
RPH3A-223	ENST00000552352	PANK1	Q8TE04	598 aa		10.18	□□□□□ -0.78
RPH3A-223	ENST00000552352	ABCC11	Q96J66	1382 aa		10.18	□□□□□ -0.78
RPH3A-223	ENST00000552352	SHPRH	Q149N8	1683 aa		10.18	□□□□□ -0.78
RPH3A-223	ENST00000552352	MCM4	P33991	863 aa		10.17	□□□□□ -0.78
RPH3A-223	ENST00000552352	CLCN1	P35523	988 aa		10.17	□□□□□ -0.78
RPH3A-223	ENST00000552352	SIRT1	Q96EB6	747 aa		10.17	□□□□□ -0.78
RPH3A-223	ENST00000552352	GLIPR1L2	Q4G1C9	344 aa		10.17	□□□□□ -0.78
RPH3A-223	ENST00000552352	CPS1	P31327	1500 aa		10.17	□□□□□ -0.78
RPH3A-223	ENST00000552352	TNR	Q92752	1358 aa		10.17	□□□□□ -0.78
RPH3A-223	ENST00000552352	WWC1	Q8IX03	1113 aa		10.16	□□□□□ -0.78
RPH3A-223	ENST00000552352	PNN	Q9H307	717 aa	Known RBP	10.16	□□□□□ -0.78
RPH3A-223	ENST00000552352	UBR1	Q8IWV7	1749 aa		10.16	□□□□□ -0.78
RPH3A-223	ENST00000552352	FAM135B	Q49AJ0	1406 aa		10.16	□□□□□ -0.78
RPH3A-223	ENST00000552352	ATP7B	P35670	1465 aa		10.15	□□□□□ -0.78
RPH3A-223	ENST00000552352	HDGF	P51858	240 aa	Known RBP	10.15	□□□□□ -0.78
RPH3A-223	ENST00000552352	SLC12A5	Q9H2X9	1139 aa		10.15	□□□□□ -0.78
RPH3A-223	ENST00000552352	PDZRN3	Q9UPQ7	1066 aa		10.15	□□□□□ -0.78
RPH3A-223	ENST00000552352	CD163L1	Q9NR16	1453 aa		10.15	□□□□□ -0.78
RPH3A-223	ENST00000552352	MYCN	P04198	464 aa	Predicted RBP	10.14	□□□□□ -0.79
RPH3A-223	ENST00000552352	RARS	P54136	660 aa	Known RBP	10.14	□□□□□ -0.79
RPH3A-223	ENST00000552352	CHMP5	Q9NZZ3	219 aa		10.14	□□□□□ -0.79
RPH3A-223	ENST00000552352	PCDHB15	Q9Y5E8	787 aa		10.14	□□□□□ -0.79
RPH3A-223	ENST00000552352	IQSEC2	Q5JU85	1478 aa		10.14	□□□□□ -0.79
RPH3A-223	ENST00000552352	MRE11	P49959	708 aa		10.14	□□□□□ -0.79
RPH3A-223	ENST00000552352	NAP1L5	Q96NT1	182 aa	Predicted RBP	10.14	□□□□□ -0.79
RPH3A-223	ENST00000552352	PANK2	Q9BZ23	570 aa		10.14	□□□□□ -0.79
RPH3A-223	ENST00000552352	RWDD1	Q9H446	243 aa	Predicted RBP	10.14	□□□□□ -0.79
RPH3A-223	ENST00000552352	STAG3	Q9UJ98	1225 aa		10.14	□□□□□ -0.79
RPH3A-223	ENST00000552352	ISY1	Q9ULR0	285 aa	Known RBP	10.13	□□□□□ -0.79
RPH3A-223	ENST00000552352	ADGRB2	O60241	1585 aa		10.13	□□□□□ -0.79
RPH3A-223	ENST00000552352	TRAK2	O60296	914 aa		10.13	□□□□□ -0.79
RPH3A-223	ENST00000552352	ARX	Q96QS3	562 aa		10.13	□□□□□ -0.79
RPH3A-223	ENST00000552352		A0A1W2PP64	1363 aa		10.13	□□□□□ -0.79
RPH3A-223	ENST00000552352	TMEM2	Q9UHN6	1383 aa		10.13	□□□□□ -0.79
RPH3A-223	ENST00000552352	MORC1	Q86VD1	984 aa		10.12	□□□□□ -0.79
RPH3A-223	ENST00000552352	ESF1	Q9H501	851 aa	Known RBP	10.12	□□□□□ -0.79
RPH3A-223	ENST00000552352	SLIT1	O75093	1534 aa		10.12	□□□□□ -0.79
RPH3A-223	ENST00000552352	RRP9	O43818	475 aa	Known RBP	10.12	□□□□□ -0.79
RPH3A-223	ENST00000552352	RLBP1	P12271	317 aa		10.12	□□□□□ -0.79
RPH3A-223	ENST00000552352	NUTM2D	Q5VT03	806 aa	Predicted RBP	10.12	□□□□□ -0.79
RPH3A-223	ENST00000552352	PRAM1	Q96QH2	718 aa		10.12	□□□□□ -0.79
RPH3A-223	ENST00000552352	GZF1	Q9H116	711 aa	Predicted RBP	10.12	□□□□□ -0.79
RPH3A-223	ENST00000552352	DDX11L8	A8MPP1	907 aa		10.11	□□□□□ -0.79
RPH3A-223	ENST00000552352	HSP90AA1	P07900	732 aa	Known RBP	10.11	□□□□□ -0.79
RPH3A-223	ENST00000552352	C22orf23	Q9BZE7	217 aa		10.11	□□□□□ -0.79
RPH3A-223	ENST00000552352	TERF2IP	Q9NYB0	399 aa		10.11	□□□□□ -0.79
RPH3A-223	ENST00000552352	ARHGAP23	Q9P227	1491 aa		10.11	□□□□□ -0.79
RPH3A-223	ENST00000552352	KIF20B	Q96Q89	1820 aa		10.11	□□□□□ -0.79
RPH3A-223	ENST00000552352	WDR63	Q8IWG1	891 aa		10.11	□□□□□ -0.79
RPH3A-223	ENST00000552352	PLEKHG1	Q9ULL1	1385 aa		10.11	□□□□□ -0.79
RPH3A-223	ENST00000552352	CDC42BPG	Q6DT37	1551 aa		10.11	□□□□□ -0.79
RPH3A-223	ENST00000552352	SPRYD3	Q8NCJ5	442 aa		10.1	□□□□□ -0.79
RPH3A-223	ENST00000552352	DIP2A	Q14689	1571 aa		10.1	□□□□□ -0.79
RPH3A-223	ENST00000552352	COL3A1	P02461	1466 aa	Predicted RBP	10.1	□□□□□ -0.79
RPH3A-223	ENST00000552352	RUNDC1	Q96C34	613 aa		10.1	□□□□□ -0.79
RPH3A-223	ENST00000552352	PKNOX2	Q96KN3	472 aa		10.1	□□□□□ -0.79
RPH3A-223	ENST00000552352	CFAP53	Q96M91	514 aa		10.1	□□□□□ -0.79
RPH3A-223	ENST00000552352	DNAJC5	Q9H3Z4	198 aa		10.1	□□□□□ -0.79
RPH3A-223	ENST00000552352	GRPEL1	Q9HAV7	217 aa		10.1	□□□□□ -0.79
RPH3A-223	ENST00000552352	NCOA3	Q9Y6Q9	1424 aa		10.1	□□□□□ -0.79
RPH3A-223	ENST00000552352	HSP90AA2P	Q14568	343 aa	Predicted RBP	10.09	□□□□□ -0.79
RPH3A-223	ENST00000552352	CABP2	Q9NPB3	220 aa		10.09	□□□□□ -0.79
RPH3A-223	ENST00000552352	C3	P01024	1663 aa		10.09	□□□□□ -0.79
RPH3A-223	ENST00000552352	MVP	Q14764	893 aa	Known RBP	10.09	□□□□□ -0.79
RPH3A-223	ENST00000552352	MYH16	Q9H6N6	1097 aa		10.09	□□□□□ -0.79
RPH3A-223	ENST00000552352	TNN	Q9UQP3	1299 aa		10.09	□□□□□ -0.79
RPH3A-223	ENST00000552352	ADAMTS13	Q76LX8	1427 aa		10.09	□□□□□ -0.79
RPH3A-223	ENST00000552352	CPSF1	Q10570	1443 aa	Known RBP	10.08	□□□□□ -0.8
RPH3A-223	ENST00000552352	CCDC27	Q2M243	656 aa		10.08	□□□□□ -0.8
RPH3A-223	ENST00000552352	HSCB	Q8IWL3	235 aa		10.08	□□□□□ -0.8
RPH3A-223	ENST00000552352	ZNF692	Q9BU19	519 aa	Predicted RBP	10.08	□□□□□ -0.8
RPH3A-223	ENST00000552352	ESPN	B1AK53	854 aa		10.08	□□□□□ -0.8
RPH3A-223	ENST00000552352	MFAP1	P55081	439 aa	Known RBP	10.08	□□□□□ -0.8
RPH3A-223	ENST00000552352	SRPK2	P78362	688 aa	Known RBP	10.08	□□□□□ -0.8
RPH3A-223	ENST00000552352	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	10.08	□□□□□ -0.8
RPH3A-223	ENST00000552352	STK26	Q9P289	416 aa		10.08	□□□□□ -0.8
RPH3A-223	ENST00000552352	MET	P08581	1390 aa		10.08	□□□□□ -0.8
RPH3A-223	ENST00000552352	PNPLA6	Q8IY17	1366 aa		10.08	□□□□□ -0.8
RPH3A-223	ENST00000552352	FER1L4	A9Z1Z3	1794 aa		10.08	□□□□□ -0.8
RPH3A-223	ENST00000552352	DDIT3	P35638	169 aa		10.07	□□□□□ -0.8
RPH3A-223	ENST00000552352	MLEC	Q14165	292 aa		10.07	□□□□□ -0.8

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