RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 PTGER2P43116 358 aa15.83■□□□□ 0.12
SLC48A1-209ENST00000552003 PSME1Q06323 249 aa15.83■□□□□ 0.12
SLC48A1-209ENST00000552003 ANO8Q9HCE9 1232 aaPredicted RBP15.83■□□□□ 0.12
SLC48A1-209ENST00000552003 SPATA31A1Q5TZJ5 1347 aa15.83■□□□□ 0.12
SLC48A1-209ENST00000552003 ARHGEF10O15013 1369 aa15.83■□□□□ 0.12
SLC48A1-209ENST00000552003 TRPM3Q9HCF6 1732 aaPredicted RBP15.82■□□□□ 0.12
SLC48A1-209ENST00000552003 IFT172Q9UG01 1749 aa15.82■□□□□ 0.12
SLC48A1-209ENST00000552003 CRYBG1Q9Y4K1 1723 aa15.82■□□□□ 0.12
SLC48A1-209ENST00000552003 GOLGB1Q14789 3259 aaKnown RBP15.81■□□□□ 0.12
SLC48A1-209ENST00000552003 ALS2Q96Q42 1657 aa15.8■□□□□ 0.12
SLC48A1-209ENST00000552003 RRBP1Q9P2E9 1410 aaKnown RBP15.8■□□□□ 0.12
SLC48A1-209ENST00000552003 ADGRF5Q8IZF2 1346 aa15.8■□□□□ 0.12
SLC48A1-209ENST00000552003 TMEM132EQ6IEE7 984 aa15.8■□□□□ 0.12
SLC48A1-209ENST00000552003 KNDC1Q76NI1 1749 aa15.8■□□□□ 0.12
SLC48A1-209ENST00000552003 ABCC11Q96J66 1382 aa15.79■□□□□ 0.12
SLC48A1-209ENST00000552003 RPGRIP1LQ68CZ1 1315 aa15.78■□□□□ 0.12
SLC48A1-209ENST00000552003 PMFBP1Q8TBY8 1022 aa15.78■□□□□ 0.12
SLC48A1-209ENST00000552003 SYT17Q9BSW7 474 aa15.78■□□□□ 0.12
SLC48A1-209ENST00000552003 ZBTB7AO95365 584 aa15.77■□□□□ 0.12
SLC48A1-209ENST00000552003 APLP2Q06481 763 aa15.77■□□□□ 0.12
SLC48A1-209ENST00000552003 FHDC1Q9C0D6 1143 aaPredicted RBP15.77■□□□□ 0.12
SLC48A1-209ENST00000552003 PTF1AQ7RTS3 328 aa15.75■□□□□ 0.11
SLC48A1-209ENST00000552003 ATF5Q9Y2D1 282 aaPredicted RBP15.75■□□□□ 0.11
SLC48A1-209ENST00000552003 CHRNA2Q15822 529 aa15.74■□□□□ 0.11
SLC48A1-209ENST00000552003 PROM2Q8N271 834 aa15.73■□□□□ 0.11
SLC48A1-209ENST00000552003 SGIP1Q9BQI5 828 aa15.73■□□□□ 0.11
SLC48A1-209ENST00000552003 USP35Q9P2H5 1018 aa15.73■□□□□ 0.11
SLC48A1-209ENST00000552003 GIGYF1O75420 1035 aaPredicted RBP15.72■□□□□ 0.11
SLC48A1-209ENST00000552003 PRDM11Q9NQV5 511 aa15.72■□□□□ 0.11
SLC48A1-209ENST00000552003 STRN4Q9NRL3 753 aa15.72■□□□□ 0.11
SLC48A1-209ENST00000552003 YTHDC2Q9H6S0 1430 aaKnown RBP15.71■□□□□ 0.11
SLC48A1-209ENST00000552003 PDE3BQ13370 1112 aa15.71■□□□□ 0.11
SLC48A1-209ENST00000552003 BARGINQ6ZT62 677 aa15.71■□□□□ 0.11
SLC48A1-209ENST00000552003 KIAA0232Q92628 1395 aa15.71■□□□□ 0.11
SLC48A1-209ENST00000552003 SHANK3Q9BYB0 1731 aa15.71■□□□□ 0.1
SLC48A1-209ENST00000552003 PEAK1Q9H792 1746 aa15.71■□□□□ 0.1
SLC48A1-209ENST00000552003 SBF2Q86WG5 1849 aa15.71■□□□□ 0.1
SLC48A1-209ENST00000552003 RGPD3A6NKT7 1758 aaPredicted RBP15.7■□□□□ 0.1
SLC48A1-209ENST00000552003 RGPD4Q7Z3J3 1758 aa15.7■□□□□ 0.1
SLC48A1-209ENST00000552003 ITGAEP38570 1179 aa15.7■□□□□ 0.1
SLC48A1-209ENST00000552003 SIRT1Q96EB6 747 aa15.68■□□□□ 0.1
SLC48A1-209ENST00000552003 ACIN1Q9UKV3 1341 aaKnown RBP15.68■□□□□ 0.1
SLC48A1-209ENST00000552003 PLSCR1O15162 318 aa15.67■□□□□ 0.1
SLC48A1-209ENST00000552003 LARP1Q6PKG0 1096 aaKnown RBP15.67■□□□□ 0.1
SLC48A1-209ENST00000552003 SSH2Q76I76 1423 aa15.67■□□□□ 0.1
SLC48A1-209ENST00000552003 PRR36Q9H6K5 1346 aa15.67■□□□□ 0.1
SLC48A1-209ENST00000552003 SAFB2Q14151 953 aaKnown RBP eCLIP15.66■□□□□ 0.1
SLC48A1-209ENST00000552003 DLC1Q96QB1 1528 aa15.65■□□□□ 0.1
SLC48A1-209ENST00000552003 PIK3C2GO75747 1445 aa15.65■□□□□ 0.1
SLC48A1-209ENST00000552003 ANKARQ7Z5J8 1434 aa15.65■□□□□ 0.1
SLC48A1-209ENST00000552003 PHRF1Q9P1Y6 1649 aaKnown RBP15.65■□□□□ 0.1
SLC48A1-209ENST00000552003 ZC3H6P61129 1189 aaKnown RBP15.64■□□□□ 0.09
SLC48A1-209ENST00000552003 PARP4Q9UKK3 1724 aaKnown RBP15.64■□□□□ 0.09
SLC48A1-209ENST00000552003 TCP11L2Q8N4U5 519 aa15.62■□□□□ 0.09
SLC48A1-209ENST00000552003 PRAM1Q96QH2 718 aa15.62■□□□□ 0.09
SLC48A1-209ENST00000552003 BCL11BQ9C0K0 894 aaPredicted RBP15.62■□□□□ 0.09
SLC48A1-209ENST00000552003 SPATA31E1Q6ZUB1 1445 aa15.61■□□□□ 0.09
SLC48A1-209ENST00000552003 RGL3Q3MIN7 710 aa15.61■□□□□ 0.09
SLC48A1-209ENST00000552003 GPRASP1Q5JY77 1395 aa15.61■□□□□ 0.09
SLC48A1-209ENST00000552003 LMO7Q8WWI1 1683 aa15.6■□□□□ 0.09
SLC48A1-209ENST00000552003 MTFR1LQ9H019 292 aa15.6■□□□□ 0.09
SLC48A1-209ENST00000552003 MAP3K5Q99683 1374 aa15.6■□□□□ 0.09
SLC48A1-209ENST00000552003 PAK3O75914 559 aaPredicted RBP15.59■□□□□ 0.09
SLC48A1-209ENST00000552003 SLC15A2Q16348 729 aa15.59■□□□□ 0.09
SLC48A1-209ENST00000552003 ARXQ96QS3 562 aa15.59■□□□□ 0.09
SLC48A1-209ENST00000552003 OVOS2A0A0G2JMS6 1433 aa15.59■□□□□ 0.09
SLC48A1-209ENST00000552003 OVOS2A0A0J9YW53 1432 aa15.59■□□□□ 0.09
SLC48A1-209ENST00000552003 OVOS2Q6IE36 1432 aa15.59■□□□□ 0.09
SLC48A1-209ENST00000552003 EVA1CP58658 441 aa15.58■□□□□ 0.08
SLC48A1-209ENST00000552003 GPR162Q16538 588 aa15.58■□□□□ 0.08
SLC48A1-209ENST00000552003 NUTM2GQ5VZR2 741 aa15.58■□□□□ 0.08
SLC48A1-209ENST00000552003 PIAS4Q8N2W9 510 aaPredicted RBP15.58■□□□□ 0.08
SLC48A1-209ENST00000552003 HIRIP3Q9BW71 556 aaPredicted RBP15.58■□□□□ 0.08
SLC48A1-209ENST00000552003 CFAP70Q5T0N1 1121 aa15.57■□□□□ 0.08
SLC48A1-209ENST00000552003 C14orf93Q9H972 538 aaKnown RBP15.57■□□□□ 0.08
SLC48A1-209ENST00000552003 DHX57Q6P158 1386 aaKnown RBP15.57■□□□□ 0.08
SLC48A1-209ENST00000552003 ATP7BP35670 1465 aa15.57■□□□□ 0.08
SLC48A1-209ENST00000552003 LRRC37A3O60309 1634 aa15.57■□□□□ 0.08
SLC48A1-209ENST00000552003 TXNRD1Q16881 649 aa15.56■□□□□ 0.08
SLC48A1-209ENST00000552003 ANKRD30BQ9BXX2 1392 aa15.56■□□□□ 0.08
SLC48A1-209ENST00000552003 STK32BQ9NY57 414 aa15.55■□□□□ 0.08
SLC48A1-209ENST00000552003 HSPA6P17066 643 aa15.54■□□□□ 0.08
SLC48A1-209ENST00000552003 THRAP3Q9Y2W1 955 aaKnown RBP15.54■□□□□ 0.08
SLC48A1-209ENST00000552003 TULP4Q9NRJ4 1543 aa15.53■□□□□ 0.08
SLC48A1-209ENST00000552003 MARCH10Q8NA82 808 aaPredicted RBP15.53■□□□□ 0.08
SLC48A1-209ENST00000552003 NGDNQ8NEJ9 315 aaKnown RBP15.53■□□□□ 0.08
SLC48A1-209ENST00000552003 SLC4A1APQ9BWU0 796 aaKnown RBP15.52■□□□□ 0.08
SLC48A1-209ENST00000552003 COL5A2P05997 1499 aaPredicted RBP15.52■□□□□ 0.07
SLC48A1-209ENST00000552003 MINK1Q8N4C8 1332 aaPredicted RBP15.51■□□□□ 0.07
SLC48A1-209ENST00000552003 NLGN2Q8NFZ4 835 aa15.51■□□□□ 0.07
SLC48A1-209ENST00000552003 CPDO75976 1380 aa15.5■□□□□ 0.07
SLC48A1-209ENST00000552003 PAPPAQ13219 1627 aa15.5■□□□□ 0.07
SLC48A1-209ENST00000552003 C11orf95C9JLR9 678 aaPredicted RBP15.5■□□□□ 0.07
SLC48A1-209ENST00000552003 YBX3P16989 372 aaKnown RBP eCLIP15.5■□□□□ 0.07
SLC48A1-209ENST00000552003 POGKQ9P215 609 aa15.5■□□□□ 0.07
SLC48A1-209ENST00000552003 ATP10DQ9P241 1426 aa15.5■□□□□ 0.07
SLC48A1-209ENST00000552003 WASLO00401 505 aaPredicted RBP15.49■□□□□ 0.07
SLC48A1-209ENST00000552003 PELP1Q8IZL8 1130 aaKnown RBP15.49■□□□□ 0.07
SLC48A1-209ENST00000552003 DDB1Q16531 1140 aa15.48■□□□□ 0.07
SLC48A1-209ENST00000552003 BCL9O00512 1426 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms