RNA–Protein interactions for RNA: ENST00000551525.5

PTPRB-210, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 1 (best) BASIC

Gene PTPRB, Length 5,291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-210ENST00000551525 USP8P40818 1118 aa7.69□□□□□ -1.18
PTPRB-210ENST00000551525 SARNPP82979 210 aaKnown RBP7.69□□□□□ -1.18
PTPRB-210ENST00000551525 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.69□□□□□ -1.18
PTPRB-210ENST00000551525 NLRP2Q9NX02 1062 aa7.69□□□□□ -1.18
PTPRB-210ENST00000551525 PLCH2O75038 1416 aa7.69□□□□□ -1.18
PTPRB-210ENST00000551525 ATAD2Q6PL18 1390 aa7.69□□□□□ -1.18
PTPRB-210ENST00000551525 NUP160Q12769 1436 aa7.68□□□□□ -1.18
PTPRB-210ENST00000551525 PPP4R3BQ5MIZ7 849 aa7.68□□□□□ -1.18
PTPRB-210ENST00000551525 PRDM11Q9NQV5 511 aa7.68□□□□□ -1.18
PTPRB-210ENST00000551525 DHX29Q7Z478 1369 aaKnown RBP7.68□□□□□ -1.18
PTPRB-210ENST00000551525 HMGN5P82970 282 aaKnown RBP7.68□□□□□ -1.18
PTPRB-210ENST00000551525 ZRSR2Q15696 482 aaKnown RBP7.68□□□□□ -1.18
PTPRB-210ENST00000551525 CHMP4CQ96CF2 233 aa7.68□□□□□ -1.18
PTPRB-210ENST00000551525 SPG7Q9UQ90 795 aa7.68□□□□□ -1.18
PTPRB-210ENST00000551525 KDM6BO15054 1643 aa7.68□□□□□ -1.18
PTPRB-210ENST00000551525 NUTM2FA1L443 756 aa7.68□□□□□ -1.18
PTPRB-210ENST00000551525 NLRP6P59044 892 aa7.68□□□□□ -1.18
PTPRB-210ENST00000551525 NEO1Q92859 1461 aa7.68□□□□□ -1.18
PTPRB-210ENST00000551525 UGGT2Q9NYU1 1516 aa7.67□□□□□ -1.18
PTPRB-210ENST00000551525 NEUROD2Q15784 382 aa7.67□□□□□ -1.18
PTPRB-210ENST00000551525 KIF21AQ7Z4S6 1674 aa7.67□□□□□ -1.18
PTPRB-210ENST00000551525 TIGD1Q96MW7 591 aa7.67□□□□□ -1.18
PTPRB-210ENST00000551525 TRIM6-TRIM34B2RNG4 842 aa7.67□□□□□ -1.18
PTPRB-210ENST00000551525 RDXP35241 583 aaKnown RBP7.67□□□□□ -1.18
PTPRB-210ENST00000551525 ABTB2Q8N961 1025 aa7.67□□□□□ -1.18
PTPRB-210ENST00000551525 TRIM34Q9BYJ4 488 aa7.67□□□□□ -1.18
PTPRB-210ENST00000551525 HDAC1Q13547 482 aaPredicted RBP7.66□□□□□ -1.18
PTPRB-210ENST00000551525 ARHGEF6Q15052 776 aa7.66□□□□□ -1.18
PTPRB-210ENST00000551525 ZNF710Q8N1W2 664 aa7.66□□□□□ -1.18
PTPRB-210ENST00000551525 SYTL4Q96C24 671 aaPredicted RBP7.66□□□□□ -1.18
PTPRB-210ENST00000551525 RTEL1-TNFRSF6BF6WH68 1400 aa7.66□□□□□ -1.18
PTPRB-210ENST00000551525 KIAA1107Q9UPP5 1409 aa7.66□□□□□ -1.18
PTPRB-210ENST00000551525 PNISRQ8TF01 805 aaKnown RBP7.66□□□□□ -1.18
PTPRB-210ENST00000551525 FRAT2O75474 233 aaPredicted RBP7.66□□□□□ -1.18
PTPRB-210ENST00000551525 MAP3K1Q13233 1512 aa7.66□□□□□ -1.18
PTPRB-210ENST00000551525 UHRF1BP1LA0JNW5 1464 aa7.66□□□□□ -1.18
PTPRB-210ENST00000551525 GAS2L2Q8NHY3 880 aa7.66□□□□□ -1.18
PTPRB-210ENST00000551525 KCTD17Q8N5Z5 321 aa7.65□□□□□ -1.18
PTPRB-210ENST00000551525 KCNJ4P48050 445 aa7.65□□□□□ -1.18
PTPRB-210ENST00000551525 CERS3Q8IU89 383 aa7.65□□□□□ -1.18
PTPRB-210ENST00000551525 CCDC97Q96F63 343 aaPredicted RBP7.65□□□□□ -1.18
PTPRB-210ENST00000551525 MYCBPQ99417 103 aaPredicted RBP7.65□□□□□ -1.18
PTPRB-210ENST00000551525 RAPGEF6Q8TEU7 1601 aa7.65□□□□□ -1.18
PTPRB-210ENST00000551525 HSPA5P11021 654 aaKnown RBP7.65□□□□□ -1.18
PTPRB-210ENST00000551525 L3MBTL2Q969R5 705 aa7.65□□□□□ -1.19
PTPRB-210ENST00000551525 PES1O00541 588 aaKnown RBP7.65□□□□□ -1.19
PTPRB-210ENST00000551525 HTATSF1O43719 755 aaKnown RBP7.65□□□□□ -1.19
PTPRB-210ENST00000551525 TOM1L2Q6ZVM7 507 aa7.65□□□□□ -1.19
PTPRB-210ENST00000551525 PMFBP1Q8TBY8 1022 aa7.65□□□□□ -1.19
PTPRB-210ENST00000551525 TNNT1P13805 278 aa7.64□□□□□ -1.19
PTPRB-210ENST00000551525 ZRSR1Q15695 479 aaKnown RBP7.64□□□□□ -1.19
PTPRB-210ENST00000551525 DIAPH1O60610 1272 aaKnown RBP7.64□□□□□ -1.19
PTPRB-210ENST00000551525 ERBINQ96RT1 1412 aa7.64□□□□□ -1.19
PTPRB-210ENST00000551525 GIMAP7Q8NHV1 300 aa7.64□□□□□ -1.19
PTPRB-210ENST00000551525 GRIN3BO60391 1043 aa7.64□□□□□ -1.19
PTPRB-210ENST00000551525 ISY1Q9ULR0 285 aaKnown RBP7.64□□□□□ -1.19
PTPRB-210ENST00000551525 CTDP1Q9Y5B0 961 aaPredicted RBP7.64□□□□□ -1.19
PTPRB-210ENST00000551525 ATP10AO60312 1499 aa7.63□□□□□ -1.19
PTPRB-210ENST00000551525 A2MP01023 1474 aa7.63□□□□□ -1.19
PTPRB-210ENST00000551525 NPHP3Q7Z494 1330 aa7.63□□□□□ -1.19
PTPRB-210ENST00000551525 RBM6P78332 1123 aaKnown RBP7.63□□□□□ -1.19
PTPRB-210ENST00000551525 GIGYF1O75420 1035 aaPredicted RBP7.63□□□□□ -1.19
PTPRB-210ENST00000551525 ITSN2Q9NZM3 1697 aa7.63□□□□□ -1.19
PTPRB-210ENST00000551525 KIF6Q6ZMV9 814 aa7.62□□□□□ -1.19
PTPRB-210ENST00000551525 FRAT1Q92837 279 aaPredicted RBP7.62□□□□□ -1.19
PTPRB-210ENST00000551525 CHMP3Q9Y3E7 222 aa7.62□□□□□ -1.19
PTPRB-210ENST00000551525 CAMSAP2Q08AD1 1489 aa7.62□□□□□ -1.19
PTPRB-210ENST00000551525 TIAM1Q13009 1591 aa7.62□□□□□ -1.19
PTPRB-210ENST00000551525 ARMCX6Q7L4S7 300 aa7.62□□□□□ -1.19
PTPRB-210ENST00000551525 QTRT2Q9H974 415 aaKnown RBP7.62□□□□□ -1.19
PTPRB-210ENST00000551525 SPON1Q9HCB6 807 aa7.62□□□□□ -1.19
PTPRB-210ENST00000551525 KIAA1211Q6ZU35 1233 aa7.61□□□□□ -1.19
PTPRB-210ENST00000551525 STRN4Q9NRL3 753 aa7.61□□□□□ -1.19
PTPRB-210ENST00000551525 ZNF644Q9H582 1327 aaPredicted RBP7.61□□□□□ -1.19
PTPRB-210ENST00000551525 CCDC91Q7Z6B0 441 aa7.61□□□□□ -1.19
PTPRB-210ENST00000551525 LRCH2Q5VUJ6 765 aa7.61□□□□□ -1.19
PTPRB-210ENST00000551525 USP21Q9UK80 565 aa7.61□□□□□ -1.19
PTPRB-210ENST00000551525 TTC36A6NLP5 189 aa7.61□□□□□ -1.19
PTPRB-210ENST00000551525 TPM3P06753 285 aa7.61□□□□□ -1.19
PTPRB-210ENST00000551525 UTP14CQ5TAP6 766 aaKnown RBP7.61□□□□□ -1.19
PTPRB-210ENST00000551525 R3HCC1Q9Y3T6 440 aaKnown RBP7.61□□□□□ -1.19
PTPRB-210ENST00000551525 DUOX2Q9NRD8 1548 aa7.61□□□□□ -1.19
PTPRB-210ENST00000551525 MAGI2Q86UL8 1455 aa7.61□□□□□ -1.19
PTPRB-210ENST00000551525 KIAA0556O60303 1618 aa7.6□□□□□ -1.19
PTPRB-210ENST00000551525 CLEC11AQ9Y240 323 aa7.6□□□□□ -1.19
PTPRB-210ENST00000551525 RPRD2Q5VT52 1461 aaKnown RBP7.6□□□□□ -1.19
PTPRB-210ENST00000551525 SLC26A8Q96RN1 970 aa7.6□□□□□ -1.19
PTPRB-210ENST00000551525 IGSF3O75054 1194 aa7.6□□□□□ -1.19
PTPRB-210ENST00000551525 NBPF6Q5VWK0 638 aa7.6□□□□□ -1.19
PTPRB-210ENST00000551525 NBPF5PQ86XG9 351 aaPredicted RBP7.6□□□□□ -1.19
PTPRB-210ENST00000551525 NBPF4Q96M43 638 aa7.6□□□□□ -1.19
PTPRB-210ENST00000551525 PRAM1Q96QH2 718 aa7.6□□□□□ -1.19
PTPRB-210ENST00000551525 CDCA7Q9BWT1 371 aaPredicted RBP7.6□□□□□ -1.19
PTPRB-210ENST00000551525 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.6□□□□□ -1.19
PTPRB-210ENST00000551525 CCDC34Q96HJ3 373 aa7.6□□□□□ -1.19
PTPRB-210ENST00000551525 PHF8Q9UPP1 1060 aa7.6□□□□□ -1.19
PTPRB-210ENST00000551525 ZNF652Q9Y2D9 606 aa7.6□□□□□ -1.19
PTPRB-210ENST00000551525 NINLQ9Y2I6 1382 aa7.6□□□□□ -1.19
PTPRB-210ENST00000551525 GOLGA6L19H0YKK7 550 aa7.59□□□□□ -1.19
PTPRB-210ENST00000551525 CDK13Q14004 1512 aaKnown RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms