RNA–Protein interactions for RNA: ENST00000551436.1

KRT4-203, Transcript of keratin 4, humanhuman

TSL 2

Gene KRT4, Length 552 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-203ENST00000551436 ILDR1Q86SU0 546 aaPredicted RBP13.21□□□□□ -0.29
KRT4-203ENST00000551436 STK26Q9P289 416 aa13.21□□□□□ -0.29
KRT4-203ENST00000551436 METP08581 1390 aa13.2□□□□□ -0.3
KRT4-203ENST00000551436 PIK3R4Q99570 1358 aa13.2□□□□□ -0.3
KRT4-203ENST00000551436 DIP2AQ14689 1571 aa13.2□□□□□ -0.3
KRT4-203ENST00000551436 HSPA5P11021 654 aaKnown RBP13.2□□□□□ -0.3
KRT4-203ENST00000551436 TRAK1Q9UPV9 953 aa13.2□□□□□ -0.3
KRT4-203ENST00000551436 ADGRB1O14514 1584 aa13.2□□□□□ -0.3
KRT4-203ENST00000551436 SLC24A1O60721 1099 aa13.19□□□□□ -0.3
KRT4-203ENST00000551436 CHRM1P11229 460 aaPredicted RBP13.19□□□□□ -0.3
KRT4-203ENST00000551436 YTHDC2Q9H6S0 1430 aaKnown RBP13.19□□□□□ -0.3
KRT4-203ENST00000551436 LRPPRCP42704 1394 aaKnown RBP13.19□□□□□ -0.3
KRT4-203ENST00000551436 ABCC11Q96J66 1382 aa13.19□□□□□ -0.3
KRT4-203ENST00000551436 NRXN3Q9Y4C0 1643 aa13.18□□□□□ -0.3
KRT4-203ENST00000551436 ST20-MTHFSA0A0A6YYL1 179 aa13.18□□□□□ -0.3
KRT4-203ENST00000551436 POLR1AO95602 1720 aaPredicted RBP13.18□□□□□ -0.3
KRT4-203ENST00000551436 IQGAP1P46940 1657 aa13.18□□□□□ -0.3
KRT4-203ENST00000551436 SIRT1Q96EB6 747 aa13.17□□□□□ -0.3
KRT4-203ENST00000551436 POGKQ9P215 609 aa13.17□□□□□ -0.3
KRT4-203ENST00000551436 AMOTL2Q9Y2J4 779 aa13.17□□□□□ -0.3
KRT4-203ENST00000551436 HOXB3P14651 431 aaPredicted RBP13.16□□□□□ -0.3
KRT4-203ENST00000551436 FBXO3Q9UK99 471 aa13.16□□□□□ -0.3
KRT4-203ENST00000551436 CENPJQ9HC77 1338 aaPredicted RBP13.15□□□□□ -0.3
KRT4-203ENST00000551436 ZNF316A6NFI3 1004 aaPredicted RBP13.15□□□□□ -0.3
KRT4-203ENST00000551436 KCNA6P17658 529 aa13.15□□□□□ -0.3
KRT4-203ENST00000551436 KLHL34Q8N239 644 aa13.15□□□□□ -0.3
KRT4-203ENST00000551436 PRAM1Q96QH2 718 aa13.15□□□□□ -0.3
KRT4-203ENST00000551436 HIRIP3Q9BW71 556 aaPredicted RBP13.15□□□□□ -0.3
KRT4-203ENST00000551436 ASXL1Q8IXJ9 1541 aa13.14□□□□□ -0.31
KRT4-203ENST00000551436 SETD1AO15047 1707 aaKnown RBP13.13□□□□□ -0.31
KRT4-203ENST00000551436 TECPR2O15040 1411 aa13.13□□□□□ -0.31
KRT4-203ENST00000551436 FAM135BQ49AJ0 1406 aa13.13□□□□□ -0.31
KRT4-203ENST00000551436 TMF1P82094 1093 aa13.12□□□□□ -0.31
KRT4-203ENST00000551436 DLC1Q96QB1 1528 aa13.12□□□□□ -0.31
KRT4-203ENST00000551436 PTPRUQ92729 1446 aa13.12□□□□□ -0.31
KRT4-203ENST00000551436 SAFB2Q14151 953 aaKnown RBP eCLIP13.11□□□□□ -0.31
KRT4-203ENST00000551436 CDCA8Q53HL2 280 aa13.11□□□□□ -0.31
KRT4-203ENST00000551436 WAPLQ7Z5K2 1190 aa13.11□□□□□ -0.31
KRT4-203ENST00000551436 STRCQ7RTU9 1775 aa13.11□□□□□ -0.31
KRT4-203ENST00000551436 VASPP50552 380 aaPredicted RBP13.1□□□□□ -0.31
KRT4-203ENST00000551436 TESK2Q96S53 571 aa13.1□□□□□ -0.31
KRT4-203ENST00000551436 PTCH1Q13635 1447 aa13.1□□□□□ -0.31
KRT4-203ENST00000551436 ROBO2Q9HCK4 1378 aa13.09□□□□□ -0.31
KRT4-203ENST00000551436 SBNO2Q9Y2G9 1366 aa13.09□□□□□ -0.31
KRT4-203ENST00000551436 PROSER2Q86WR7 435 aaPredicted RBP13.09□□□□□ -0.31
KRT4-203ENST00000551436 BOLA1Q9Y3E2 137 aa13.09□□□□□ -0.31
KRT4-203ENST00000551436 CPS1P31327 1500 aa13.08□□□□□ -0.31
KRT4-203ENST00000551436 PDAP1Q13442 181 aaKnown RBP13.08□□□□□ -0.32
KRT4-203ENST00000551436 EVC2Q86UK5 1308 aa13.08□□□□□ -0.32
KRT4-203ENST00000551436 MINK1Q8N4C8 1332 aaPredicted RBP13.08□□□□□ -0.32
KRT4-203ENST00000551436 HOXB1P14653 301 aaPredicted RBP13.07□□□□□ -0.32
KRT4-203ENST00000551436 C14orf37Q86TY3 774 aa13.07□□□□□ -0.32
KRT4-203ENST00000551436 CABP2Q9NPB3 220 aa13.07□□□□□ -0.32
KRT4-203ENST00000551436 NKTRP30414 1462 aaKnown RBP13.06□□□□□ -0.32
KRT4-203ENST00000551436 KNDC1Q76NI1 1749 aa13.06□□□□□ -0.32
KRT4-203ENST00000551436 PLEKHH1Q9ULM0 1364 aa13.06□□□□□ -0.32
KRT4-203ENST00000551436 XRN1Q8IZH2 1706 aaKnown RBP13.05□□□□□ -0.32
KRT4-203ENST00000551436 ARHGEF28Q8N1W1 1705 aaKnown RBP13.05□□□□□ -0.32
KRT4-203ENST00000551436 CHD2O14647 1828 aaKnown RBP13.05□□□□□ -0.32
KRT4-203ENST00000551436 POLR3GLQ9BT43 218 aa13.05□□□□□ -0.32
KRT4-203ENST00000551436 ZNF335Q9H4Z2 1342 aaPredicted RBP13.05□□□□□ -0.32
KRT4-203ENST00000551436 NWD1Q149M9 1564 aa13.04□□□□□ -0.32
KRT4-203ENST00000551436 SRPK2P78362 688 aaKnown RBP13.04□□□□□ -0.32
KRT4-203ENST00000551436 PUS7Q96PZ0 661 aaKnown RBP13.04□□□□□ -0.32
KRT4-203ENST00000551436 C11orf95C9JLR9 678 aaPredicted RBP13.03□□□□□ -0.32
KRT4-203ENST00000551436 WASLO00401 505 aaPredicted RBP13.03□□□□□ -0.32
KRT4-203ENST00000551436 CDK19Q9BWU1 502 aa13.03□□□□□ -0.32
KRT4-203ENST00000551436 KIF7Q2M1P5 1343 aa13.03□□□□□ -0.32
KRT4-203ENST00000551436 CCDC7Q96M83 1385 aa13.03□□□□□ -0.32
KRT4-203ENST00000551436 NCOA3Q9Y6Q9 1424 aa13.03□□□□□ -0.32
KRT4-203ENST00000551436 QRICH2Q9H0J4 1663 aa13.02□□□□□ -0.32
KRT4-203ENST00000551436 WASHC2AQ641Q2 1341 aa13.02□□□□□ -0.33
KRT4-203ENST00000551436 DISP3Q9P2K9 1392 aa13.02□□□□□ -0.33
KRT4-203ENST00000551436 G3V3G9 751 aa13.01□□□□□ -0.33
KRT4-203ENST00000551436 ZNF710Q8N1W2 664 aa13.01□□□□□ -0.33
KRT4-203ENST00000551436 RBM33Q96EV2 1170 aaKnown RBP13.01□□□□□ -0.33
KRT4-203ENST00000551436 C19orf44Q9H6X5 657 aa13.01□□□□□ -0.33
KRT4-203ENST00000551436 TMEM94Q12767 1356 aa13.01□□□□□ -0.33
KRT4-203ENST00000551436 ERBB3P21860 1342 aa13□□□□□ -0.33
KRT4-203ENST00000551436 ADGRL3Q9HAR2 1447 aa12.99□□□□□ -0.33
KRT4-203ENST00000551436 ATAD2Q6PL18 1390 aa12.99□□□□□ -0.33
KRT4-203ENST00000551436 ATF3P18847 181 aa12.99□□□□□ -0.33
KRT4-203ENST00000551436 TMC1Q8TDI8 760 aa12.98□□□□□ -0.33
KRT4-203ENST00000551436 MSH6P52701 1360 aa12.97□□□□□ -0.33
KRT4-203ENST00000551436 DDX10Q13206 875 aaKnown RBP12.97□□□□□ -0.33
KRT4-203ENST00000551436 DOK7Q18PE1 504 aa12.97□□□□□ -0.33
KRT4-203ENST00000551436 CADPS2Q86UW7 1296 aa12.97□□□□□ -0.33
KRT4-203ENST00000551436 RNF166Q96A37 237 aaPredicted RBP12.97□□□□□ -0.33
KRT4-203ENST00000551436 NUDT16Q96DE0 195 aaKnown RBP12.97□□□□□ -0.33
KRT4-203ENST00000551436 ADGRB2O60241 1585 aa12.97□□□□□ -0.33
KRT4-203ENST00000551436 LRRC7Q96NW7 1537 aa12.97□□□□□ -0.33
KRT4-203ENST00000551436 TULP4Q9NRJ4 1543 aa12.97□□□□□ -0.33
KRT4-203ENST00000551436 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.96□□□□□ -0.33
KRT4-203ENST00000551436 NINLQ9Y2I6 1382 aa12.96□□□□□ -0.33
KRT4-203ENST00000551436 DCCP43146 1447 aa12.95□□□□□ -0.34
KRT4-203ENST00000551436 NUTM2FA1L443 756 aa12.94□□□□□ -0.34
KRT4-203ENST00000551436 TERF2IPQ9NYB0 399 aa12.94□□□□□ -0.34
KRT4-203ENST00000551436 STRCP1A6NGW2 1772 aa12.94□□□□□ -0.34
KRT4-203ENST00000551436 CDC42BPGQ6DT37 1551 aa12.94□□□□□ -0.34
KRT4-203ENST00000551436 VARS2Q5ST30 1063 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms