RNA–Protein interactions for RNA: ENST00000551327.5

PXN-218, Transcript of paxillin, humanhuman

TSL 4

Gene PXN, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-218ENST00000551327 CCDC9Q9Y3X0 531 aaKnown RBP12.81□□□□□ -0.36
PXN-218ENST00000551327 TULP4Q9NRJ4 1543 aa12.8□□□□□ -0.36
PXN-218ENST00000551327 VPS72Q15906 364 aa12.8□□□□□ -0.36
PXN-218ENST00000551327 FAM98CQ17RN3 349 aaKnown RBP12.8□□□□□ -0.36
PXN-218ENST00000551327 DCAF11Q8TEB1 546 aa12.8□□□□□ -0.36
PXN-218ENST00000551327 NRKQ7Z2Y5 1582 aa12.8□□□□□ -0.36
PXN-218ENST00000551327 LMO7Q8WWI1 1683 aa12.79□□□□□ -0.36
PXN-218ENST00000551327 SBNO1A3KN83 1393 aa12.79□□□□□ -0.36
PXN-218ENST00000551327 PSME1Q06323 249 aa12.78□□□□□ -0.36
PXN-218ENST00000551327 KRT27Q7Z3Y8 459 aa12.78□□□□□ -0.36
PXN-218ENST00000551327 HAP1P54257 671 aaPredicted RBP12.77□□□□□ -0.37
PXN-218ENST00000551327 EN1Q05925 392 aaPredicted RBP12.77□□□□□ -0.37
PXN-218ENST00000551327 MINK1Q8N4C8 1332 aaPredicted RBP12.77□□□□□ -0.37
PXN-218ENST00000551327 ATP7BP35670 1465 aa12.77□□□□□ -0.37
PXN-218ENST00000551327 A0A0G2JS52 829 aa12.76□□□□□ -0.37
PXN-218ENST00000551327 MYT1Q01538 1121 aa12.76□□□□□ -0.37
PXN-218ENST00000551327 CCDC125Q86Z20 511 aa12.76□□□□□ -0.37
PXN-218ENST00000551327 BTG4Q9NY30 223 aa12.76□□□□□ -0.37
PXN-218ENST00000551327 ONECUT3O60422 494 aaPredicted RBP12.75□□□□□ -0.37
PXN-218ENST00000551327 PEAK1Q9H792 1746 aa12.75□□□□□ -0.37
PXN-218ENST00000551327 POGKQ9P215 609 aa12.75□□□□□ -0.37
PXN-218ENST00000551327 AKAP12Q02952 1782 aa12.74□□□□□ -0.37
PXN-218ENST00000551327 PARP4Q9UKK3 1724 aaKnown RBP12.74□□□□□ -0.37
PXN-218ENST00000551327 LRRC37A3O60309 1634 aa12.74□□□□□ -0.37
PXN-218ENST00000551327 ARHGEF10O15013 1369 aa12.74□□□□□ -0.37
PXN-218ENST00000551327 WASLO00401 505 aaPredicted RBP12.74□□□□□ -0.37
PXN-218ENST00000551327 TRAK1Q9UPV9 953 aa12.74□□□□□ -0.37
PXN-218ENST00000551327 QRICH2Q9H0J4 1663 aa12.73□□□□□ -0.37
PXN-218ENST00000551327 BRD4O60885 1362 aaPredicted RBP12.73□□□□□ -0.37
PXN-218ENST00000551327 R3HDM1Q15032 1099 aaKnown RBP12.73□□□□□ -0.37
PXN-218ENST00000551327 CHRNA2Q15822 529 aa12.73□□□□□ -0.37
PXN-218ENST00000551327 COL18A1P39060 1754 aa12.72□□□□□ -0.37
PXN-218ENST00000551327 CASZ1Q86V15 1759 aa12.72□□□□□ -0.37
PXN-218ENST00000551327 EZH2Q15910 746 aaKnown RBP12.72□□□□□ -0.37
PXN-218ENST00000551327 NUTM2GQ5VZR2 741 aa12.72□□□□□ -0.37
PXN-218ENST00000551327 SPATA31A5Q5VU36 1347 aa12.71□□□□□ -0.37
PXN-218ENST00000551327 SPATA31A7Q8IWB4 1347 aa12.71□□□□□ -0.37
PXN-218ENST00000551327 KIAA0232Q92628 1395 aa12.7□□□□□ -0.38
PXN-218ENST00000551327 SF3B2Q13435 895 aaKnown RBP12.7□□□□□ -0.38
PXN-218ENST00000551327 KDM2AQ9Y2K7 1162 aa12.7□□□□□ -0.38
PXN-218ENST00000551327 PIK3C2AO00443 1686 aa12.7□□□□□ -0.38
PXN-218ENST00000551327 MYOM1P52179 1685 aa12.69□□□□□ -0.38
PXN-218ENST00000551327 DISP2A7MBM2 1401 aa12.69□□□□□ -0.38
PXN-218ENST00000551327 POLR3AO14802 1390 aaPredicted RBP12.69□□□□□ -0.38
PXN-218ENST00000551327 GPRASP1Q5JY77 1395 aa12.69□□□□□ -0.38
PXN-218ENST00000551327 PLEKHG3A1L390 1219 aa12.68□□□□□ -0.38
PXN-218ENST00000551327 BAG6P46379 1132 aa12.68□□□□□ -0.38
PXN-218ENST00000551327 CCDC61Q9Y6R9 512 aa12.68□□□□□ -0.38
PXN-218ENST00000551327 RGPD3A6NKT7 1758 aaPredicted RBP12.67□□□□□ -0.38
PXN-218ENST00000551327 RGPD4Q7Z3J3 1758 aa12.67□□□□□ -0.38
PXN-218ENST00000551327 PAK3O75914 559 aaPredicted RBP12.67□□□□□ -0.38
PXN-218ENST00000551327 TRIM37O94972 964 aa12.67□□□□□ -0.38
PXN-218ENST00000551327 STRN4Q9NRL3 753 aa12.67□□□□□ -0.38
PXN-218ENST00000551327 UTRNP46939 3433 aa12.67□□□□□ -0.38
PXN-218ENST00000551327 KAT6BQ8WYB5 2073 aa12.66□□□□□ -0.38
PXN-218ENST00000551327 SPATA31A1Q5TZJ5 1347 aa12.66□□□□□ -0.38
PXN-218ENST00000551327 ZC3H6P61129 1189 aaKnown RBP12.66□□□□□ -0.38
PXN-218ENST00000551327 L3MBTL2Q969R5 705 aa12.66□□□□□ -0.38
PXN-218ENST00000551327 USP35Q9P2H5 1018 aa12.66□□□□□ -0.38
PXN-218ENST00000551327 SSH2Q76I76 1423 aa12.65□□□□□ -0.38
PXN-218ENST00000551327 SLC24A1O60721 1099 aa12.65□□□□□ -0.38
PXN-218ENST00000551327 PRDM11Q9NQV5 511 aa12.65□□□□□ -0.38
PXN-218ENST00000551327 SBNO2Q9Y2G9 1366 aa12.65□□□□□ -0.38
PXN-218ENST00000551327 TUBGCP6Q96RT7 1819 aa12.65□□□□□ -0.39
PXN-218ENST00000551327 NUDT16Q96DE0 195 aaKnown RBP12.64□□□□□ -0.39
PXN-218ENST00000551327 PUS7Q96PZ0 661 aaKnown RBP12.64□□□□□ -0.39
PXN-218ENST00000551327 CAMKK2Q96RR4 588 aa12.64□□□□□ -0.39
PXN-218ENST00000551327 PTF1AQ7RTS3 328 aa12.63□□□□□ -0.39
PXN-218ENST00000551327 NGDNQ8NEJ9 315 aaKnown RBP12.63□□□□□ -0.39
PXN-218ENST00000551327 CDK19Q9BWU1 502 aa12.63□□□□□ -0.39
PXN-218ENST00000551327 LTN1O94822 1766 aa12.63□□□□□ -0.39
PXN-218ENST00000551327 CENPJQ9HC77 1338 aaPredicted RBP12.62□□□□□ -0.39
PXN-218ENST00000551327 TRIM26Q12899 539 aaPredicted RBP12.62□□□□□ -0.39
PXN-218ENST00000551327 NBPF1Q3BBV0 1214 aa12.62□□□□□ -0.39
PXN-218ENST00000551327 LARP1Q6PKG0 1096 aaKnown RBP12.62□□□□□ -0.39
PXN-218ENST00000551327 CHD4Q14839 1912 aa12.62□□□□□ -0.39
PXN-218ENST00000551327 COL5A2P05997 1499 aaPredicted RBP12.61□□□□□ -0.39
PXN-218ENST00000551327 PDGFDQ9GZP0 370 aaPredicted RBP12.61□□□□□ -0.39
PXN-218ENST00000551327 TIMELESSQ9UNS1 1208 aa12.6□□□□□ -0.39
PXN-218ENST00000551327 RGPD2P0DJD1 1756 aa12.6□□□□□ -0.39
PXN-218ENST00000551327 ACEP12821 1306 aa12.6□□□□□ -0.39
PXN-218ENST00000551327 CLSPNQ9HAW4 1339 aa12.6□□□□□ -0.39
PXN-218ENST00000551327 TRPM1Q7Z4N2 1603 aa12.59□□□□□ -0.39
PXN-218ENST00000551327 SLIT3O75094 1523 aa12.59□□□□□ -0.39
PXN-218ENST00000551327 NBPF8Q3BBV2 869 aa12.59□□□□□ -0.39
PXN-218ENST00000551327 ZNF692Q9BU19 519 aaPredicted RBP12.59□□□□□ -0.39
PXN-218ENST00000551327 BTAF1O14981 1849 aa12.59□□□□□ -0.39
PXN-218ENST00000551327 MON2Q7Z3U7 1717 aa12.59□□□□□ -0.39
PXN-218ENST00000551327 APBA3O96018 575 aa12.58□□□□□ -0.4
PXN-218ENST00000551327 EVC2Q86UK5 1308 aa12.58□□□□□ -0.4
PXN-218ENST00000551327 CPDO75976 1380 aa12.57□□□□□ -0.4
PXN-218ENST00000551327 ANO8Q9HCE9 1232 aaPredicted RBP12.57□□□□□ -0.4
PXN-218ENST00000551327 USP19O94966 1318 aa12.57□□□□□ -0.4
PXN-218ENST00000551327 PPIP5K1Q6PFW1 1433 aa12.56□□□□□ -0.4
PXN-218ENST00000551327 ROCK2O75116 1388 aaKnown RBP12.56□□□□□ -0.4
PXN-218ENST00000551327 NHSQ6T4R5 1651 aa12.55□□□□□ -0.4
PXN-218ENST00000551327 ZBTB7CA1YPR0 619 aa12.55□□□□□ -0.4
PXN-218ENST00000551327 SIN3AQ96ST3 1273 aa12.55□□□□□ -0.4
PXN-218ENST00000551327 PAPPAQ13219 1627 aa12.55□□□□□ -0.4
PXN-218ENST00000551327 GOLGB1Q14789 3259 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms