RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 SBNO1A3KN83 1393 aa21.04■□□□□ 0.96
SNRPF-203ENST00000551316 SBF2Q86WG5 1849 aa21.03■□□□□ 0.96
SNRPF-203ENST00000551316 LMOD2Q6P5Q4 547 aa21.02■□□□□ 0.96
SNRPF-203ENST00000551316 ARHGEF10O15013 1369 aa21.01■□□□□ 0.95
SNRPF-203ENST00000551316 PHRF1Q9P1Y6 1649 aaKnown RBP21.01■□□□□ 0.95
SNRPF-203ENST00000551316 PEAK1Q9H792 1746 aa21.01■□□□□ 0.95
SNRPF-203ENST00000551316 FAM196AQ6ZSG2 479 aa21■□□□□ 0.95
SNRPF-203ENST00000551316 NBPF8Q3BBV2 869 aa20.99■□□□□ 0.95
SNRPF-203ENST00000551316 NBPF14Q5TI25 921 aa20.99■□□□□ 0.95
SNRPF-203ENST00000551316 ROCK1Q13464 1354 aa20.98■□□□□ 0.95
SNRPF-203ENST00000551316 PTGER2P43116 358 aa20.98■□□□□ 0.95
SNRPF-203ENST00000551316 PHF8Q9UPP1 1060 aa20.98■□□□□ 0.95
SNRPF-203ENST00000551316 SPATA31A1Q5TZJ5 1347 aa20.98■□□□□ 0.95
SNRPF-203ENST00000551316 STK26Q9P289 416 aa20.97■□□□□ 0.95
SNRPF-203ENST00000551316 DLC1Q96QB1 1528 aa20.95■□□□□ 0.94
SNRPF-203ENST00000551316 ZBTB7AO95365 584 aa20.95■□□□□ 0.94
SNRPF-203ENST00000551316 PARP4Q9UKK3 1724 aaKnown RBP20.95■□□□□ 0.94
SNRPF-203ENST00000551316 VGFO15240 615 aaPredicted RBP20.93■□□□□ 0.94
SNRPF-203ENST00000551316 GIGYF1O75420 1035 aaPredicted RBP20.93■□□□□ 0.94
SNRPF-203ENST00000551316 FHDC1Q9C0D6 1143 aaPredicted RBP20.93■□□□□ 0.94
SNRPF-203ENST00000551316 PSME1Q06323 249 aa20.91■□□□□ 0.94
SNRPF-203ENST00000551316 ADGRF5Q8IZF2 1346 aa20.9■□□□□ 0.94
SNRPF-203ENST00000551316 SYT17Q9BSW7 474 aa20.9■□□□□ 0.94
SNRPF-203ENST00000551316 LRRC37A3O60309 1634 aa20.89■□□□□ 0.93
SNRPF-203ENST00000551316 TMEM132EQ6IEE7 984 aa20.88■□□□□ 0.93
SNRPF-203ENST00000551316 PMFBP1Q8TBY8 1022 aa20.88■□□□□ 0.93
SNRPF-203ENST00000551316 ATF5Q9Y2D1 282 aaPredicted RBP20.88■□□□□ 0.93
SNRPF-203ENST00000551316 ABCC11Q96J66 1382 aa20.87■□□□□ 0.93
SNRPF-203ENST00000551316 LMO7Q8WWI1 1683 aa20.86■□□□□ 0.93
SNRPF-203ENST00000551316 CHRNA2Q15822 529 aa20.86■□□□□ 0.93
SNRPF-203ENST00000551316 PTF1AQ7RTS3 328 aa20.86■□□□□ 0.93
SNRPF-203ENST00000551316 KIAA0232Q92628 1395 aa20.85■□□□□ 0.93
SNRPF-203ENST00000551316 STRN4Q9NRL3 753 aa20.85■□□□□ 0.93
SNRPF-203ENST00000551316 USP35Q9P2H5 1018 aa20.85■□□□□ 0.93
SNRPF-203ENST00000551316 YTHDC2Q9H6S0 1430 aaKnown RBP20.85■□□□□ 0.93
SNRPF-203ENST00000551316 WNK3Q9BYP7 1800 aa20.84■□□□□ 0.93
SNRPF-203ENST00000551316 LOC105371045A0A1W2PR82 267 aa20.84■□□□□ 0.93
SNRPF-203ENST00000551316 SGIP1Q9BQI5 828 aa20.84■□□□□ 0.93
SNRPF-203ENST00000551316 SSH2Q76I76 1423 aa20.84■□□□□ 0.93
SNRPF-203ENST00000551316 PRDM11Q9NQV5 511 aa20.83■□□□□ 0.93
SNRPF-203ENST00000551316 RPGRIP1LQ68CZ1 1315 aa20.8■□□□□ 0.92
SNRPF-203ENST00000551316 PIK3C2GO75747 1445 aa20.79■□□□□ 0.92
SNRPF-203ENST00000551316 PDE3BQ13370 1112 aa20.79■□□□□ 0.92
SNRPF-203ENST00000551316 PROM2Q8N271 834 aa20.79■□□□□ 0.92
SNRPF-203ENST00000551316 PAPPAQ13219 1627 aa20.78■□□□□ 0.92
SNRPF-203ENST00000551316 ANKARQ7Z5J8 1434 aa20.78■□□□□ 0.92
SNRPF-203ENST00000551316 AKAP12Q02952 1782 aa20.77■□□□□ 0.92
SNRPF-203ENST00000551316 BARGINQ6ZT62 677 aa20.77■□□□□ 0.92
SNRPF-203ENST00000551316 APLP2Q06481 763 aa20.76■□□□□ 0.91
SNRPF-203ENST00000551316 PRR36Q9H6K5 1346 aa20.76■□□□□ 0.91
SNRPF-203ENST00000551316 ACIN1Q9UKV3 1341 aaKnown RBP20.76■□□□□ 0.91
SNRPF-203ENST00000551316 ATP7BP35670 1465 aa20.75■□□□□ 0.91
SNRPF-203ENST00000551316 SAFB2Q14151 953 aaKnown RBP eCLIP20.75■□□□□ 0.91
SNRPF-203ENST00000551316 OVOS2A0A0G2JMS6 1433 aa20.75■□□□□ 0.91
SNRPF-203ENST00000551316 OVOS2A0A0J9YW53 1432 aa20.75■□□□□ 0.91
SNRPF-203ENST00000551316 OVOS2Q6IE36 1432 aa20.75■□□□□ 0.91
SNRPF-203ENST00000551316 ITGAEP38570 1179 aa20.74■□□□□ 0.91
SNRPF-203ENST00000551316 LARP1Q6PKG0 1096 aaKnown RBP20.74■□□□□ 0.91
SNRPF-203ENST00000551316 MAP3K5Q99683 1374 aa20.73■□□□□ 0.91
SNRPF-203ENST00000551316 TOPAZ1Q8N9V7 1692 aa20.73■□□□□ 0.91
SNRPF-203ENST00000551316 COL24A1Q17RW2 1714 aa20.73■□□□□ 0.91
SNRPF-203ENST00000551316 SPATA31E1Q6ZUB1 1445 aa20.71■□□□□ 0.91
SNRPF-203ENST00000551316 PLSCR1O15162 318 aa20.71■□□□□ 0.91
SNRPF-203ENST00000551316 BCL11BQ9C0K0 894 aaPredicted RBP20.71■□□□□ 0.91
SNRPF-203ENST00000551316 TULP4Q9NRJ4 1543 aa20.7■□□□□ 0.9
SNRPF-203ENST00000551316 ZC3H6P61129 1189 aaKnown RBP20.7■□□□□ 0.9
SNRPF-203ENST00000551316 TUBGCP6Q96RT7 1819 aa20.69■□□□□ 0.9
SNRPF-203ENST00000551316 ITSN1Q15811 1721 aa20.68■□□□□ 0.9
SNRPF-203ENST00000551316 MTFR1LQ9H019 292 aa20.68■□□□□ 0.9
SNRPF-203ENST00000551316 GPRASP1Q5JY77 1395 aa20.68■□□□□ 0.9
SNRPF-203ENST00000551316 ATP10DQ9P241 1426 aa20.68■□□□□ 0.9
SNRPF-203ENST00000551316 GPR162Q16538 588 aa20.67■□□□□ 0.9
SNRPF-203ENST00000551316 TCP11L2Q8N4U5 519 aa20.67■□□□□ 0.9
SNRPF-203ENST00000551316 ARXQ96QS3 562 aa20.67■□□□□ 0.9
SNRPF-203ENST00000551316 PRAM1Q96QH2 718 aa20.66■□□□□ 0.9
SNRPF-203ENST00000551316 COL5A2P05997 1499 aaPredicted RBP20.66■□□□□ 0.9
SNRPF-203ENST00000551316 SLC15A2Q16348 729 aa20.65■□□□□ 0.9
SNRPF-203ENST00000551316 PAK3O75914 559 aaPredicted RBP20.64■□□□□ 0.89
SNRPF-203ENST00000551316 HSPA6P17066 643 aa20.64■□□□□ 0.89
SNRPF-203ENST00000551316 NUTM2GQ5VZR2 741 aa20.64■□□□□ 0.89
SNRPF-203ENST00000551316 DHX57Q6P158 1386 aaKnown RBP20.63■□□□□ 0.89
SNRPF-203ENST00000551316 HIRIP3Q9BW71 556 aaPredicted RBP20.63■□□□□ 0.89
SNRPF-203ENST00000551316 SIRT1Q96EB6 747 aa20.62■□□□□ 0.89
SNRPF-203ENST00000551316 STK32BQ9NY57 414 aa20.62■□□□□ 0.89
SNRPF-203ENST00000551316 NHSQ6T4R5 1651 aa20.61■□□□□ 0.89
SNRPF-203ENST00000551316 TXNRD1Q16881 649 aa20.61■□□□□ 0.89
SNRPF-203ENST00000551316 RGL3Q3MIN7 710 aa20.61■□□□□ 0.89
SNRPF-203ENST00000551316 PELP1Q8IZL8 1130 aaKnown RBP20.61■□□□□ 0.89
SNRPF-203ENST00000551316 QSER1Q2KHR3 1735 aa20.61■□□□□ 0.89
SNRPF-203ENST00000551316 CAPN15O75808 1086 aa20.6■□□□□ 0.89
SNRPF-203ENST00000551316 NLGN2Q8NFZ4 835 aa20.6■□□□□ 0.89
SNRPF-203ENST00000551316 ANKRD30BQ9BXX2 1392 aa20.59■□□□□ 0.89
SNRPF-203ENST00000551316 ADGRB1O14514 1584 aa20.59■□□□□ 0.89
SNRPF-203ENST00000551316 YBX3P16989 372 aaKnown RBP eCLIP20.58■□□□□ 0.89
SNRPF-203ENST00000551316 EVA1CP58658 441 aa20.58■□□□□ 0.89
SNRPF-203ENST00000551316 KLHL34Q8N239 644 aa20.57■□□□□ 0.88
SNRPF-203ENST00000551316 CRB1P82279 1406 aa20.56■□□□□ 0.88
SNRPF-203ENST00000551316 BTAF1O14981 1849 aa20.56■□□□□ 0.88
SNRPF-203ENST00000551316 MARCH10Q8NA82 808 aaPredicted RBP20.56■□□□□ 0.88
SNRPF-203ENST00000551316 COL18A1P39060 1754 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms