RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 TOP2AP11388 1531 aaKnown RBP7.06□□□□□ -1.28
LSM3P2-201ENST00000551246 COPS2P61201 443 aa7.05□□□□□ -1.28
LSM3P2-201ENST00000551246 FGD1P98174 961 aa7.05□□□□□ -1.28
LSM3P2-201ENST00000551246 QPCTQ16769 361 aa7.05□□□□□ -1.28
LSM3P2-201ENST00000551246 SCUBE3Q8IX30 993 aa7.05□□□□□ -1.28
LSM3P2-201ENST00000551246 DCAF11Q8TEB1 546 aa7.05□□□□□ -1.28
LSM3P2-201ENST00000551246 FRAT1Q92837 279 aaPredicted RBP7.05□□□□□ -1.28
LSM3P2-201ENST00000551246 BACH2Q9BYV9 841 aa7.05□□□□□ -1.28
LSM3P2-201ENST00000551246 RRAGDQ9NQL2 400 aaPredicted RBP7.05□□□□□ -1.28
LSM3P2-201ENST00000551246 KDM5BQ9UGL1 1544 aa7.05□□□□□ -1.28
LSM3P2-201ENST00000551246 ARAP1Q96P48 1450 aa7.04□□□□□ -1.28
LSM3P2-201ENST00000551246 SYNJ1O43426 1573 aa7.04□□□□□ -1.28
LSM3P2-201ENST00000551246 FHAD1B1AJZ9 1412 aa7.04□□□□□ -1.28
LSM3P2-201ENST00000551246 SETD5Q9C0A6 1442 aa7.04□□□□□ -1.28
LSM3P2-201ENST00000551246 LILRB3O75022 631 aa7.04□□□□□ -1.28
LSM3P2-201ENST00000551246 ITGBL1O95965 494 aaPredicted RBP7.04□□□□□ -1.28
LSM3P2-201ENST00000551246 NFKBIBQ15653 356 aa7.04□□□□□ -1.28
LSM3P2-201ENST00000551246 RNF19BQ6ZMZ0 732 aa7.04□□□□□ -1.28
LSM3P2-201ENST00000551246 ZNF516Q92618 1163 aa7.04□□□□□ -1.28
LSM3P2-201ENST00000551246 MAP3K1Q13233 1512 aa7.04□□□□□ -1.28
LSM3P2-201ENST00000551246 TLL1O43897 1013 aa7.03□□□□□ -1.28
LSM3P2-201ENST00000551246 ZPR1O75312 459 aa7.03□□□□□ -1.28
LSM3P2-201ENST00000551246 NR1I2O75469 434 aa7.03□□□□□ -1.28
LSM3P2-201ENST00000551246 CALD1Q05682 793 aaKnown RBP7.03□□□□□ -1.28
LSM3P2-201ENST00000551246 PRPF38BQ5VTL8 546 aaKnown RBP7.03□□□□□ -1.28
LSM3P2-201ENST00000551246 PPP2R2DQ66LE6 453 aa7.03□□□□□ -1.28
LSM3P2-201ENST00000551246 BRICD5Q6PL45 260 aa7.03□□□□□ -1.28
LSM3P2-201ENST00000551246 CABLES1Q8TDN4 633 aa7.03□□□□□ -1.28
LSM3P2-201ENST00000551246 SYMPKQ92797 1274 aaKnown RBP7.03□□□□□ -1.28
LSM3P2-201ENST00000551246 PCMTD1Q96MG8 357 aaPredicted RBP7.03□□□□□ -1.28
LSM3P2-201ENST00000551246 IL21Q9HBE4 155 aa7.03□□□□□ -1.28
LSM3P2-201ENST00000551246 RBM10P98175 930 aaKnown RBP7.02□□□□□ -1.29
LSM3P2-201ENST00000551246 CSPP1Q1MSJ5 1256 aa7.02□□□□□ -1.29
LSM3P2-201ENST00000551246 SCRIBQ14160 1630 aa7.01□□□□□ -1.29
LSM3P2-201ENST00000551246 MTMR2Q13614 643 aa7.01□□□□□ -1.29
LSM3P2-201ENST00000551246 Q3C1V9 767 aa7.01□□□□□ -1.29
LSM3P2-201ENST00000551246 KANK4Q5T7N3 995 aaPredicted RBP7.01□□□□□ -1.29
LSM3P2-201ENST00000551246 ZBTB3Q9H5J0 574 aa7.01□□□□□ -1.29
LSM3P2-201ENST00000551246 RETREG3Q86VR2 466 aa7□□□□□ -1.29
LSM3P2-201ENST00000551246 LAS1LQ9Y4W2 734 aaKnown RBP7□□□□□ -1.29
LSM3P2-201ENST00000551246 RAPGEF2Q9Y4G8 1499 aa6.99□□□□□ -1.29
LSM3P2-201ENST00000551246 CFAP99D6REC4 459 aa6.99□□□□□ -1.29
LSM3P2-201ENST00000551246 FMNL1O95466 1100 aaPredicted RBP6.99□□□□□ -1.29
LSM3P2-201ENST00000551246 ADH1BP00325 375 aa6.99□□□□□ -1.29
LSM3P2-201ENST00000551246 HSP90AA2PQ14568 343 aaPredicted RBP6.99□□□□□ -1.29
LSM3P2-201ENST00000551246 FAM160A2Q8N612 972 aaPredicted RBP6.99□□□□□ -1.29
LSM3P2-201ENST00000551246 NKX2-3Q8TAU0 364 aa6.99□□□□□ -1.29
LSM3P2-201ENST00000551246 ERICH3Q5RHP9 1530 aa6.99□□□□□ -1.29
LSM3P2-201ENST00000551246 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.98□□□□□ -1.29
LSM3P2-201ENST00000551246 SPDYE5A6NIY4 337 aa6.98□□□□□ -1.29
LSM3P2-201ENST00000551246 C6orf229H3BNL8 230 aa6.98□□□□□ -1.29
LSM3P2-201ENST00000551246 RFC5P40937 340 aa6.98□□□□□ -1.29
LSM3P2-201ENST00000551246 MSS51Q4VC12 460 aa6.98□□□□□ -1.29
LSM3P2-201ENST00000551246 CCDC184Q52MB2 194 aa6.98□□□□□ -1.29
LSM3P2-201ENST00000551246 SIN3AQ96ST3 1273 aa6.98□□□□□ -1.29
LSM3P2-201ENST00000551246 SPSB2Q99619 263 aa6.98□□□□□ -1.29
LSM3P2-201ENST00000551246 USB1Q9BQ65 265 aaKnown RBP6.98□□□□□ -1.29
LSM3P2-201ENST00000551246 PRDM9Q9NQV7 894 aa6.98□□□□□ -1.29
LSM3P2-201ENST00000551246 NUDCQ9Y266 331 aa6.98□□□□□ -1.29
LSM3P2-201ENST00000551246 CNTLNQ9NXG0 1405 aa6.98□□□□□ -1.29
LSM3P2-201ENST00000551246 PRXQ9BXM0 1461 aa6.98□□□□□ -1.29
LSM3P2-201ENST00000551246 KCNC4Q03721 635 aa6.97□□□□□ -1.29
LSM3P2-201ENST00000551246 FSD2A1L4K1 749 aa6.96□□□□□ -1.3
LSM3P2-201ENST00000551246 HSP90AA1P07900 732 aaKnown RBP6.96□□□□□ -1.3
LSM3P2-201ENST00000551246 IFFO2Q5TF58 517 aa6.96□□□□□ -1.3
LSM3P2-201ENST00000551246 PRR7Q8TB68 274 aa6.96□□□□□ -1.3
LSM3P2-201ENST00000551246 NUTM2BA6NNL0 878 aaPredicted RBP6.95□□□□□ -1.3
LSM3P2-201ENST00000551246 NUTM2EB1AL46 878 aaPredicted RBP6.95□□□□□ -1.3
LSM3P2-201ENST00000551246 DXOO77932 396 aaKnown RBP6.95□□□□□ -1.3
LSM3P2-201ENST00000551246 MMP16P51512 607 aa6.95□□□□□ -1.3
LSM3P2-201ENST00000551246 PDE4CQ08493 712 aa6.95□□□□□ -1.3
LSM3P2-201ENST00000551246 NUTM2DQ5VT03 806 aaPredicted RBP6.95□□□□□ -1.3
LSM3P2-201ENST00000551246 DESI1Q6ICB0 168 aa6.95□□□□□ -1.3
LSM3P2-201ENST00000551246 NUTM2AQ8IVF1 878 aaPredicted RBP6.95□□□□□ -1.3
LSM3P2-201ENST00000551246 PDCL3Q9H2J4 239 aa6.95□□□□□ -1.3
LSM3P2-201ENST00000551246 PRKRIP1Q9H875 184 aaPredicted RBP6.95□□□□□ -1.3
LSM3P2-201ENST00000551246 ABCA5Q8WWZ7 1642 aa6.94□□□□□ -1.3
LSM3P2-201ENST00000551246 NCOA1Q15788 1441 aa6.94□□□□□ -1.3
LSM3P2-201ENST00000551246 AKNAQ7Z591 1439 aa6.94□□□□□ -1.3
LSM3P2-201ENST00000551246 PLSCR2Q9NRY7 297 aa6.94□□□□□ -1.3
LSM3P2-201ENST00000551246 MYOM3Q5VTT5 1437 aa6.93□□□□□ -1.3
LSM3P2-201ENST00000551246 S1PR4O95977 384 aa6.93□□□□□ -1.3
LSM3P2-201ENST00000551246 TPM2P07951 284 aa6.93□□□□□ -1.3
LSM3P2-201ENST00000551246 JUNDP17535 347 aa6.93□□□□□ -1.3
LSM3P2-201ENST00000551246 L1TD1Q5T7N2 865 aaKnown RBP6.93□□□□□ -1.3
LSM3P2-201ENST00000551246 PER1O15534 1290 aaPredicted RBP6.92□□□□□ -1.3
LSM3P2-201ENST00000551246 SLC6A16Q9GZN6 736 aa6.92□□□□□ -1.3
LSM3P2-201ENST00000551246 ATP1B4Q9UN42 357 aaPredicted RBP6.92□□□□□ -1.3
LSM3P2-201ENST00000551246 USP17L8P0C7I0 530 aa6.91□□□□□ -1.3
LSM3P2-201ENST00000551246 TERF1P54274 439 aa6.91□□□□□ -1.3
LSM3P2-201ENST00000551246 CTDSPL2Q05D32 466 aa6.91□□□□□ -1.3
LSM3P2-201ENST00000551246 TMEM259Q4ZIN3 620 aa6.91□□□□□ -1.3
LSM3P2-201ENST00000551246 LYPD8Q6UX82 237 aa6.91□□□□□ -1.3
LSM3P2-201ENST00000551246 PNNQ9H307 717 aaKnown RBP6.91□□□□□ -1.3
LSM3P2-201ENST00000551246 PLA2G2EQ9NZK7 142 aa6.91□□□□□ -1.3
LSM3P2-201ENST00000551246 CCDC7Q96M83 1385 aa6.91□□□□□ -1.3
LSM3P2-201ENST00000551246 FRAT2O75474 233 aaPredicted RBP6.9□□□□□ -1.3
LSM3P2-201ENST00000551246 AP1G2O75843 785 aa6.9□□□□□ -1.3
LSM3P2-201ENST00000551246 F12P00748 615 aaPredicted RBP6.9□□□□□ -1.3
LSM3P2-201ENST00000551246 PDIA4P13667 645 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms