RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 USP35Q9P2H5 1018 aa17.49■□□□□ 0.39
GPN3-208ENST00000550974 GPR162Q16538 588 aa17.48■□□□□ 0.39
GPN3-208ENST00000550974 CASZ1Q86V15 1759 aa17.48■□□□□ 0.39
GPN3-208ENST00000550974 STRN4Q9NRL3 753 aa17.47■□□□□ 0.39
GPN3-208ENST00000550974 PLEKHH1Q9ULM0 1364 aa17.47■□□□□ 0.39
GPN3-208ENST00000550974 FMN2Q9NZ56 1722 aa17.47■□□□□ 0.39
GPN3-208ENST00000550974 CLTCL1P53675 1640 aa17.47■□□□□ 0.39
GPN3-208ENST00000550974 BCL11BQ9C0K0 894 aaPredicted RBP17.45■□□□□ 0.38
GPN3-208ENST00000550974 PRDM11Q9NQV5 511 aa17.45■□□□□ 0.38
GPN3-208ENST00000550974 DLC1Q96QB1 1528 aa17.44■□□□□ 0.38
GPN3-208ENST00000550974 CAPN15O75808 1086 aa17.43■□□□□ 0.38
GPN3-208ENST00000550974 APLP2Q06481 763 aa17.43■□□□□ 0.38
GPN3-208ENST00000550974 PMFBP1Q8TBY8 1022 aa17.43■□□□□ 0.38
GPN3-208ENST00000550974 NRXN1Q9ULB1 1477 aa17.43■□□□□ 0.38
GPN3-208ENST00000550974 TECPR2O15040 1411 aa17.42■□□□□ 0.38
GPN3-208ENST00000550974 HSPA6P17066 643 aa17.42■□□□□ 0.38
GPN3-208ENST00000550974 PLSCR1O15162 318 aa17.41■□□□□ 0.38
GPN3-208ENST00000550974 CHRNA2Q15822 529 aa17.4■□□□□ 0.38
GPN3-208ENST00000550974 PELP1Q8IZL8 1130 aaKnown RBP17.4■□□□□ 0.38
GPN3-208ENST00000550974 ARXQ96QS3 562 aa17.4■□□□□ 0.38
GPN3-208ENST00000550974 RGPD8O14715 1765 aaPredicted RBP17.4■□□□□ 0.38
GPN3-208ENST00000550974 BARGINQ6ZT62 677 aa17.39■□□□□ 0.37
GPN3-208ENST00000550974 MTFR1LQ9H019 292 aa17.39■□□□□ 0.37
GPN3-208ENST00000550974 KIF1BO60333 1816 aa17.39■□□□□ 0.37
GPN3-208ENST00000550974 SHANK3Q9BYB0 1731 aa17.38■□□□□ 0.37
GPN3-208ENST00000550974 SGIP1Q9BQI5 828 aa17.38■□□□□ 0.37
GPN3-208ENST00000550974 RPGRIP1LQ68CZ1 1315 aa17.38■□□□□ 0.37
GPN3-208ENST00000550974 EVA1CP58658 441 aa17.37■□□□□ 0.37
GPN3-208ENST00000550974 TMEM132EQ6IEE7 984 aa17.37■□□□□ 0.37
GPN3-208ENST00000550974 STK32BQ9NY57 414 aa17.37■□□□□ 0.37
GPN3-208ENST00000550974 KIAA0232Q92628 1395 aa17.35■□□□□ 0.37
GPN3-208ENST00000550974 ABCC11Q96J66 1382 aa17.35■□□□□ 0.37
GPN3-208ENST00000550974 PROM2Q8N271 834 aa17.34■□□□□ 0.37
GPN3-208ENST00000550974 ROCK1Q13464 1354 aa17.33■□□□□ 0.36
GPN3-208ENST00000550974 C11orf95C9JLR9 678 aaPredicted RBP17.33■□□□□ 0.36
GPN3-208ENST00000550974 SLC15A2Q16348 729 aa17.33■□□□□ 0.36
GPN3-208ENST00000550974 KLHL34Q8N239 644 aa17.33■□□□□ 0.36
GPN3-208ENST00000550974 TCP11L2Q8N4U5 519 aa17.33■□□□□ 0.36
GPN3-208ENST00000550974 GPRASP1Q5JY77 1395 aa17.32■□□□□ 0.36
GPN3-208ENST00000550974 MAP3K5Q99683 1374 aa17.32■□□□□ 0.36
GPN3-208ENST00000550974 PAK3O75914 559 aaPredicted RBP17.32■□□□□ 0.36
GPN3-208ENST00000550974 ZC3H6P61129 1189 aaKnown RBP17.32■□□□□ 0.36
GPN3-208ENST00000550974 PTF1AQ7RTS3 328 aa17.32■□□□□ 0.36
GPN3-208ENST00000550974 IFT172Q9UG01 1749 aa17.32■□□□□ 0.36
GPN3-208ENST00000550974 RGPD3A6NKT7 1758 aaPredicted RBP17.31■□□□□ 0.36
GPN3-208ENST00000550974 RGPD4Q7Z3J3 1758 aa17.31■□□□□ 0.36
GPN3-208ENST00000550974 ADGRF5Q8IZF2 1346 aa17.31■□□□□ 0.36
GPN3-208ENST00000550974 TRPM3Q9HCF6 1732 aaPredicted RBP17.31■□□□□ 0.36
GPN3-208ENST00000550974 LARP1Q6PKG0 1096 aaKnown RBP17.31■□□□□ 0.36
GPN3-208ENST00000550974 SSH2Q76I76 1423 aa17.3■□□□□ 0.36
GPN3-208ENST00000550974 ALS2Q96Q42 1657 aa17.3■□□□□ 0.36
GPN3-208ENST00000550974 GPBP1L1Q9HC44 474 aaPredicted RBP17.3■□□□□ 0.36
GPN3-208ENST00000550974 OVOS2A0A0G2JMS6 1433 aa17.29■□□□□ 0.36
GPN3-208ENST00000550974 OVOS2A0A0J9YW53 1432 aa17.29■□□□□ 0.36
GPN3-208ENST00000550974 OVOS2Q6IE36 1432 aa17.29■□□□□ 0.36
GPN3-208ENST00000550974 ATP10DQ9P241 1426 aa17.29■□□□□ 0.36
GPN3-208ENST00000550974 PPLO60437 1756 aa17.28■□□□□ 0.36
GPN3-208ENST00000550974 SAFB2Q14151 953 aaKnown RBP eCLIP17.28■□□□□ 0.36
GPN3-208ENST00000550974 COL13A1Q5TAT6 717 aaPredicted RBP17.28■□□□□ 0.36
GPN3-208ENST00000550974 KNDC1Q76NI1 1749 aa17.27■□□□□ 0.36
GPN3-208ENST00000550974 ACIN1Q9UKV3 1341 aaKnown RBP17.27■□□□□ 0.36
GPN3-208ENST00000550974 TXNRD1Q16881 649 aa17.27■□□□□ 0.36
GPN3-208ENST00000550974 CRYBG1Q9Y4K1 1723 aa17.27■□□□□ 0.35
GPN3-208ENST00000550974 ITGAEP38570 1179 aa17.26■□□□□ 0.35
GPN3-208ENST00000550974 ZNF526Q8TF50 670 aaPredicted RBP17.26■□□□□ 0.35
GPN3-208ENST00000550974 THRAP3Q9Y2W1 955 aaKnown RBP17.26■□□□□ 0.35
GPN3-208ENST00000550974 YTHDC2Q9H6S0 1430 aaKnown RBP17.26■□□□□ 0.35
GPN3-208ENST00000550974 SIRT1Q96EB6 747 aa17.25■□□□□ 0.35
GPN3-208ENST00000550974 SLC34A2O95436 690 aa17.24■□□□□ 0.35
GPN3-208ENST00000550974 PRELPP51888 382 aa17.24■□□□□ 0.35
GPN3-208ENST00000550974 ANKARQ7Z5J8 1434 aa17.23■□□□□ 0.35
GPN3-208ENST00000550974 PEAK1Q9H792 1746 aa17.22■□□□□ 0.35
GPN3-208ENST00000550974 GRIN3BO60391 1043 aa17.22■□□□□ 0.35
GPN3-208ENST00000550974 NGDNQ8NEJ9 315 aaKnown RBP17.22■□□□□ 0.35
GPN3-208ENST00000550974 NUTM2GQ5VZR2 741 aa17.21■□□□□ 0.35
GPN3-208ENST00000550974 TNS4Q8IZW8 715 aa17.21■□□□□ 0.35
GPN3-208ENST00000550974 NLGN2Q8NFZ4 835 aa17.21■□□□□ 0.35
GPN3-208ENST00000550974 PRAM1Q96QH2 718 aa17.21■□□□□ 0.35
GPN3-208ENST00000550974 YBX3P16989 372 aaKnown RBP eCLIP17.2■□□□□ 0.341e-7■■□□□ 13.6
GPN3-208ENST00000550974 DDB1Q16531 1140 aa17.2■□□□□ 0.34
GPN3-208ENST00000550974 PARP4Q9UKK3 1724 aaKnown RBP17.2■□□□□ 0.34
GPN3-208ENST00000550974 SBF2Q86WG5 1849 aa17.19■□□□□ 0.34
GPN3-208ENST00000550974 DHX57Q6P158 1386 aaKnown RBP17.19■□□□□ 0.34
GPN3-208ENST00000550974 APLP1P51693 650 aa17.19■□□□□ 0.34
GPN3-208ENST00000550974 RGL3Q3MIN7 710 aa17.19■□□□□ 0.34
GPN3-208ENST00000550974 DNAJC5GQ8N7S2 189 aa17.18■□□□□ 0.34
GPN3-208ENST00000550974 ATP7BP35670 1465 aa17.18■□□□□ 0.34
GPN3-208ENST00000550974 POLD1P28340 1107 aa17.17■□□□□ 0.34
GPN3-208ENST00000550974 PHRF1Q9P1Y6 1649 aaKnown RBP17.17■□□□□ 0.34
GPN3-208ENST00000550974 LOC105371045A0A1W2PR82 267 aa17.16■□□□□ 0.34
GPN3-208ENST00000550974 HIRIP3Q9BW71 556 aaPredicted RBP17.16■□□□□ 0.34
GPN3-208ENST00000550974 POGKQ9P215 609 aa17.16■□□□□ 0.34
GPN3-208ENST00000550974 PRR36Q9H6K5 1346 aa17.16■□□□□ 0.34
GPN3-208ENST00000550974 GOLGB1Q14789 3259 aaKnown RBP17.15■□□□□ 0.34
GPN3-208ENST00000550974 MARCH10Q8NA82 808 aaPredicted RBP17.14■□□□□ 0.33
GPN3-208ENST00000550974 LRRC37A3O60309 1634 aa17.13■□□□□ 0.33
GPN3-208ENST00000550974 ANKRD30BQ9BXX2 1392 aa17.13■□□□□ 0.33
GPN3-208ENST00000550974 PIK3C2GO75747 1445 aa17.13■□□□□ 0.33
GPN3-208ENST00000550974 CRB1P82279 1406 aa17.12■□□□□ 0.33
GPN3-208ENST00000550974 COL5A2P05997 1499 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms