RNA–Protein interactions for RNA: ENST00000550818.1

TSPAN8-205, Transcript of tetraspanin 8, humanhuman

TSL 1 (best)

Gene TSPAN8, Length 627 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-205ENST00000550818 EVA1BQ9NVM1 165 aa8.47□□□□□ -1.05
TSPAN8-205ENST00000550818 PCDHGC3Q9UN70 934 aa8.47□□□□□ -1.05
TSPAN8-205ENST00000550818 MAN1A2O60476 641 aa8.46□□□□□ -1.06
TSPAN8-205ENST00000550818 KRT76Q01546 638 aa8.46□□□□□ -1.06
TSPAN8-205ENST00000550818 ZNF511Q8NB15 262 aa8.46□□□□□ -1.06
TSPAN8-205ENST00000550818 MAP2K5Q13163 448 aa8.45□□□□□ -1.06
TSPAN8-205ENST00000550818 PTPRNQ16849 979 aa8.45□□□□□ -1.06
TSPAN8-205ENST00000550818 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.45□□□□□ -1.06
TSPAN8-205ENST00000550818 ADAMTS8Q9UP79 889 aa8.45□□□□□ -1.06
TSPAN8-205ENST00000550818 C6orf229H3BNL8 230 aa8.43□□□□□ -1.06
TSPAN8-205ENST00000550818 IRF6O14896 467 aa8.43□□□□□ -1.06
TSPAN8-205ENST00000550818 KCNH2Q12809 1159 aa8.43□□□□□ -1.06
TSPAN8-205ENST00000550818 C6orf118Q5T5N4 469 aa8.43□□□□□ -1.06
TSPAN8-205ENST00000550818 GPR161Q8N6U8 529 aaKnown RBP8.43□□□□□ -1.06
TSPAN8-205ENST00000550818 ZFAND3Q9H8U3 227 aa8.43□□□□□ -1.06
TSPAN8-205ENST00000550818 TULP1O00294 542 aaPredicted RBP8.42□□□□□ -1.06
TSPAN8-205ENST00000550818 FDX1P10109 184 aa8.42□□□□□ -1.06
TSPAN8-205ENST00000550818 ITPKCQ96DU7 683 aa8.41□□□□□ -1.06
TSPAN8-205ENST00000550818 FAM217BQ9NTX9 383 aaPredicted RBP8.41□□□□□ -1.06
TSPAN8-205ENST00000550818 RNF225M0QZC1 329 aaPredicted RBP8.4□□□□□ -1.06
TSPAN8-205ENST00000550818 ZIC2O95409 532 aaPredicted RBP8.4□□□□□ -1.06
TSPAN8-205ENST00000550818 NUTM1Q86Y26 1132 aa8.4□□□□□ -1.06
TSPAN8-205ENST00000550818 CNTNAP3BQ96NU0 1288 aa8.4□□□□□ -1.06
TSPAN8-205ENST00000550818 CDK15Q96Q40 435 aa8.4□□□□□ -1.06
TSPAN8-205ENST00000550818 CNTNAP3Q9BZ76 1288 aa8.4□□□□□ -1.06
TSPAN8-205ENST00000550818 NR3C2P08235 984 aa8.39□□□□□ -1.07
TSPAN8-205ENST00000550818 DNMT3LQ9UJW3 386 aa8.39□□□□□ -1.07
TSPAN8-205ENST00000550818 GPAT2Q6NUI2 795 aa8.38□□□□□ -1.07
TSPAN8-205ENST00000550818 FAM174AQ8TBP5 190 aa8.38□□□□□ -1.07
TSPAN8-205ENST00000550818 GPCPD1Q9NPB8 672 aa8.38□□□□□ -1.07
TSPAN8-205ENST00000550818 SOS2Q07890 1332 aaPredicted RBP8.37□□□□□ -1.07
TSPAN8-205ENST00000550818 ZNF385CQ66K41 422 aaPredicted RBP8.37□□□□□ -1.07
TSPAN8-205ENST00000550818 BMP2P12643 396 aa8.36□□□□□ -1.07
TSPAN8-205ENST00000550818 GRM5P41594 1212 aa8.36□□□□□ -1.07
TSPAN8-205ENST00000550818 LINC00528Q8N1L1 170 aa8.36□□□□□ -1.07
TSPAN8-205ENST00000550818 PRR7Q8TB68 274 aa8.36□□□□□ -1.07
TSPAN8-205ENST00000550818 DNMT3AQ9Y6K1 912 aaPredicted RBP8.36□□□□□ -1.07
TSPAN8-205ENST00000550818 MINK1Q8N4C8 1332 aaPredicted RBP8.35□□□□□ -1.07
TSPAN8-205ENST00000550818 CLCN1P35523 988 aa8.35□□□□□ -1.07
TSPAN8-205ENST00000550818 ARID5BQ14865 1188 aa8.35□□□□□ -1.07
TSPAN8-205ENST00000550818 MEIOBQ8N635 442 aa8.35□□□□□ -1.07
TSPAN8-205ENST00000550818 FOXJ1Q92949 421 aa8.35□□□□□ -1.07
TSPAN8-205ENST00000550818 IGHA1P01876 353 aa8.34□□□□□ -1.07
TSPAN8-205ENST00000550818 IRS1P35568 1242 aa8.34□□□□□ -1.07
TSPAN8-205ENST00000550818 NR5A1Q13285 461 aa8.34□□□□□ -1.07
TSPAN8-205ENST00000550818 RNFT1Q5M7Z0 435 aa8.34□□□□□ -1.07
TSPAN8-205ENST00000550818 DESI1Q6ICB0 168 aa8.34□□□□□ -1.07
TSPAN8-205ENST00000550818 COL25A1Q9BXS0 654 aaPredicted RBP8.34□□□□□ -1.07
TSPAN8-205ENST00000550818 NDUFV2P19404 249 aa8.33□□□□□ -1.08
TSPAN8-205ENST00000550818 XP32Q5T750 250 aa8.33□□□□□ -1.08
TSPAN8-205ENST00000550818 WHAMMQ8TF30 809 aa8.33□□□□□ -1.08
TSPAN8-205ENST00000550818 CCDC102AQ96A19 550 aa8.33□□□□□ -1.08
TSPAN8-205ENST00000550818 ARHGEF15O94989 841 aa8.32□□□□□ -1.08
TSPAN8-205ENST00000550818 UPP2O95045 317 aa8.32□□□□□ -1.08
TSPAN8-205ENST00000550818 C4orf48Q5BLP8 95 aa8.32□□□□□ -1.08
TSPAN8-205ENST00000550818 SPIRE2Q8WWL2 714 aa8.32□□□□□ -1.08
TSPAN8-205ENST00000550818 MOXD2PA6NHM9 499 aa8.31□□□□□ -1.08
TSPAN8-205ENST00000550818 PTSQ03393 145 aa8.31□□□□□ -1.08
TSPAN8-205ENST00000550818 SVOPQ8N4V2 548 aa8.31□□□□□ -1.08
TSPAN8-205ENST00000550818 ZC3H15Q8WU90 426 aaKnown RBP8.31□□□□□ -1.08
TSPAN8-205ENST00000550818 NANOS1Q8WY41 292 aaKnown RBP8.31□□□□□ -1.08
TSPAN8-205ENST00000550818 SPTLC1O15269 473 aa8.3□□□□□ -1.08
TSPAN8-205ENST00000550818 CTHP32929 405 aa8.3□□□□□ -1.08
TSPAN8-205ENST00000550818 SLURP2P0DP57 97 aa8.29□□□□□ -1.08
TSPAN8-205ENST00000550818 MTMR2Q13614 643 aa8.29□□□□□ -1.08
TSPAN8-205ENST00000550818 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.29□□□□□ -1.08
TSPAN8-205ENST00000550818 LYPD8Q6UX82 237 aa8.29□□□□□ -1.08
TSPAN8-205ENST00000550818 SPDYE5A6NIY4 337 aa8.28□□□□□ -1.08
TSPAN8-205ENST00000550818 TTLL8A6PVC2 850 aa8.27□□□□□ -1.09
TSPAN8-205ENST00000550818 FOXK2Q01167 660 aa8.27□□□□□ -1.09
TSPAN8-205ENST00000550818 KANK3Q6NY19 840 aa8.27□□□□□ -1.09
TSPAN8-205ENST00000550818 TSEN34Q9BSV6 310 aaKnown RBP8.27□□□□□ -1.09
TSPAN8-205ENST00000550818 MAP10Q9P2G4 905 aa8.27□□□□□ -1.09
TSPAN8-205ENST00000550818 F12P00748 615 aaPredicted RBP8.26□□□□□ -1.09
TSPAN8-205ENST00000550818 CCDC155Q8N6L0 562 aa8.26□□□□□ -1.09
TSPAN8-205ENST00000550818 SSTR3P32745 418 aaPredicted RBP8.25□□□□□ -1.09
TSPAN8-205ENST00000550818 FIGNL2A6NMB9 653 aa8.24□□□□□ -1.09
TSPAN8-205ENST00000550818 KRI1Q8N9T8 703 aaKnown RBP8.24□□□□□ -1.09
TSPAN8-205ENST00000550818 CFAP99D6REC4 459 aa8.23□□□□□ -1.09
TSPAN8-205ENST00000550818 ZMYND10O75800 440 aa8.23□□□□□ -1.09
TSPAN8-205ENST00000550818 MARSP56192 900 aaKnown RBP8.23□□□□□ -1.09
TSPAN8-205ENST00000550818 AGERQ15109 404 aa8.23□□□□□ -1.09
TSPAN8-205ENST00000550818 BPHLQ86WA6 291 aaPredicted RBP8.23□□□□□ -1.09
TSPAN8-205ENST00000550818 SLC35F4A4IF30 521 aa8.22□□□□□ -1.09
TSPAN8-205ENST00000550818 FSHRP23945 695 aa8.22□□□□□ -1.09
TSPAN8-205ENST00000550818 VWA5B2Q8N398 1253 aa8.22□□□□□ -1.09
TSPAN8-205ENST00000550818 SCARF2Q96GP6 870 aaPredicted RBP8.22□□□□□ -1.09
TSPAN8-205ENST00000550818 C1QTNF2Q9BXJ5 285 aa8.22□□□□□ -1.09
TSPAN8-205ENST00000550818 ADAM23O75077 832 aa8.21□□□□□ -1.1
TSPAN8-205ENST00000550818 ITGA6P23229 1130 aa8.2□□□□□ -1.1
TSPAN8-205ENST00000550818 BARGINQ6ZT62 677 aa8.2□□□□□ -1.1
TSPAN8-205ENST00000550818 KRTAP4-8Q9BYQ9 185 aa8.2□□□□□ -1.1
TSPAN8-205ENST00000550818 SLC24A3Q9HC58 644 aa8.2□□□□□ -1.1
TSPAN8-205ENST00000550818 MAP4K5Q9Y4K4 846 aa8.2□□□□□ -1.1
TSPAN8-205ENST00000550818 PCDHB15Q9Y5E8 787 aa8.2□□□□□ -1.1
TSPAN8-205ENST00000550818 EMILIN1Q9Y6C2 1016 aa8.2□□□□□ -1.1
TSPAN8-205ENST00000550818 SPINT1O43278 529 aa8.19□□□□□ -1.1
TSPAN8-205ENST00000550818 LYPD4Q6UWN0 246 aa8.19□□□□□ -1.1
TSPAN8-205ENST00000550818 SH3RF1Q7Z6J0 888 aa8.19□□□□□ -1.1
TSPAN8-205ENST00000550818 ITGB2P05107 769 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms