RNA–Protein interactions for RNA: ENST00000550582.2

NR4A1-216, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 5

Gene NR4A1, Length 607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-216ENST00000550582 ALS2Q96Q42 1657 aa21.35■■□□□ 1.01
NR4A1-216ENST00000550582 SPATA31A5Q5VU36 1347 aa21.34■■□□□ 1.01
NR4A1-216ENST00000550582 SPATA31A7Q8IWB4 1347 aa21.34■■□□□ 1.01
NR4A1-216ENST00000550582 ADGRB1O14514 1584 aa21.34■■□□□ 1.01
NR4A1-216ENST00000550582 PAK3O75914 559 aaPredicted RBP21.33■■□□□ 1.01
NR4A1-216ENST00000550582 WASLO00401 505 aaPredicted RBP21.32■■□□□ 1
NR4A1-216ENST00000550582 NGDNQ8NEJ9 315 aaKnown RBP21.32■■□□□ 1
NR4A1-216ENST00000550582 R3HDM1Q15032 1099 aaKnown RBP21.31■■□□□ 1
NR4A1-216ENST00000550582 KDM2AQ9Y2K7 1162 aa21.31■■□□□ 1
NR4A1-216ENST00000550582 RGPD1P0DJD0 1748 aa21.31■■□□□ 1
NR4A1-216ENST00000550582 TULP4Q9NRJ4 1543 aa21.3■■□□□ 1
NR4A1-216ENST00000550582 PRDM11Q9NQV5 511 aa21.3■■□□□ 1
NR4A1-216ENST00000550582 EIF3AQ14152 1382 aaKnown RBP21.29■■□□□ 1
NR4A1-216ENST00000550582 CRYBG1Q9Y4K1 1723 aa21.29■■□□□ 1
NR4A1-216ENST00000550582 THSD7AQ9UPZ6 1657 aa21.28■■□□□ 1
NR4A1-216ENST00000550582 EZH2Q15910 746 aaKnown RBP21.28■■□□□ 1
NR4A1-216ENST00000550582 CHRNA2Q15822 529 aa21.27■■□□□ 1
NR4A1-216ENST00000550582 DCAF11Q8TEB1 546 aa21.26■□□□□ 0.99
NR4A1-216ENST00000550582 SPATA31A1Q5TZJ5 1347 aa21.26■□□□□ 0.99
NR4A1-216ENST00000550582 KIAA0232Q92628 1395 aa21.25■□□□□ 0.99
NR4A1-216ENST00000550582 TNS1Q9HBL0 1735 aaKnown RBP21.25■□□□□ 0.99
NR4A1-216ENST00000550582 STRN4Q9NRL3 753 aa21.25■□□□□ 0.99
NR4A1-216ENST00000550582 DISP2A7MBM2 1401 aa21.24■□□□□ 0.99
NR4A1-216ENST00000550582 TRIM37O94972 964 aa21.24■□□□□ 0.99
NR4A1-216ENST00000550582 ZC3H6P61129 1189 aaKnown RBP21.23■□□□□ 0.99
NR4A1-216ENST00000550582 NUTM2GQ5VZR2 741 aa21.23■□□□□ 0.99
NR4A1-216ENST00000550582 NUDT16Q96DE0 195 aaKnown RBP21.23■□□□□ 0.99
NR4A1-216ENST00000550582 CAMKK2Q96RR4 588 aa21.23■□□□□ 0.99
NR4A1-216ENST00000550582 RAB3GAP2Q9H2M9 1393 aa21.23■□□□□ 0.99
NR4A1-216ENST00000550582 USP35Q9P2H5 1018 aa21.22■□□□□ 0.99
NR4A1-216ENST00000550582 FAM196AQ6ZSG2 479 aa21.21■□□□□ 0.99
NR4A1-216ENST00000550582 ATP7BP35670 1465 aa21.2■□□□□ 0.98
NR4A1-216ENST00000550582 APBA3O96018 575 aa21.2■□□□□ 0.98
NR4A1-216ENST00000550582 PHRF1Q9P1Y6 1649 aaKnown RBP21.18■□□□□ 0.98
NR4A1-216ENST00000550582 EVA1CP58658 441 aa21.17■□□□□ 0.98
NR4A1-216ENST00000550582 CDK19Q9BWU1 502 aa21.17■□□□□ 0.98
NR4A1-216ENST00000550582 ITSN1Q15811 1721 aa21.17■□□□□ 0.98
NR4A1-216ENST00000550582 ARHGEF28Q8N1W1 1705 aaKnown RBP21.16■□□□□ 0.98
NR4A1-216ENST00000550582 ACEP12821 1306 aa21.15■□□□□ 0.98
NR4A1-216ENST00000550582 PDE3BQ13370 1112 aa21.15■□□□□ 0.98
NR4A1-216ENST00000550582 SSH2Q76I76 1423 aa21.14■□□□□ 0.98
NR4A1-216ENST00000550582 NBPF8Q3BBV2 869 aa21.14■□□□□ 0.97
NR4A1-216ENST00000550582 LARP1Q6PKG0 1096 aaKnown RBP21.14■□□□□ 0.97
NR4A1-216ENST00000550582 BARGINQ6ZT62 677 aa21.13■□□□□ 0.97
NR4A1-216ENST00000550582 STAC3Q96MF2 364 aa21.13■□□□□ 0.97
NR4A1-216ENST00000550582 POLR3AO14802 1390 aaPredicted RBP21.12■□□□□ 0.97
NR4A1-216ENST00000550582 PARD3Q8TEW0 1356 aa21.12■□□□□ 0.97
NR4A1-216ENST00000550582 CAMTA1Q9Y6Y1 1673 aa21.12■□□□□ 0.97
NR4A1-216ENST00000550582 ABTB2Q8N961 1025 aa21.11■□□□□ 0.97
NR4A1-216ENST00000550582 CCDC61Q9Y6R9 512 aa21.11■□□□□ 0.97
NR4A1-216ENST00000550582 NRKQ7Z2Y5 1582 aa21.1■□□□□ 0.97
NR4A1-216ENST00000550582 PLEKHG3A1L390 1219 aa21.09■□□□□ 0.97
NR4A1-216ENST00000550582 TCP11L2Q8N4U5 519 aa21.09■□□□□ 0.97
NR4A1-216ENST00000550582 TOPAZ1Q8N9V7 1692 aa21.09■□□□□ 0.97
NR4A1-216ENST00000550582 RREB1Q92766 1687 aa21.09■□□□□ 0.97
NR4A1-216ENST00000550582 NUP188Q5SRE5 1749 aa21.07■□□□□ 0.96
NR4A1-216ENST00000550582 NBPF14Q5TI25 921 aa21.07■□□□□ 0.96
NR4A1-216ENST00000550582 CPDO75976 1380 aa21.06■□□□□ 0.96
NR4A1-216ENST00000550582 LMO7Q8WWI1 1683 aa21.05■□□□□ 0.96
NR4A1-216ENST00000550582 USP19O94966 1318 aa21.05■□□□□ 0.96
NR4A1-216ENST00000550582 GCP02774 474 aa21.04■□□□□ 0.96
NR4A1-216ENST00000550582 THRAP3Q9Y2W1 955 aaKnown RBP21.04■□□□□ 0.96
NR4A1-216ENST00000550582 NLRP13Q86W25 1043 aa21.03■□□□□ 0.96
NR4A1-216ENST00000550582 ZBTB7CA1YPR0 619 aa21.02■□□□□ 0.96
NR4A1-216ENST00000550582 NBPF1Q3BBV0 1214 aa21.02■□□□□ 0.96
NR4A1-216ENST00000550582 COL5A2P05997 1499 aaPredicted RBP21.01■□□□□ 0.95
NR4A1-216ENST00000550582 YY1P25490 414 aa21.01■□□□□ 0.95
NR4A1-216ENST00000550582 SRPK2P78362 688 aaKnown RBP21.01■□□□□ 0.95
NR4A1-216ENST00000550582 PPIP5K1Q6PFW1 1433 aa21.01■□□□□ 0.95
NR4A1-216ENST00000550582 SPON1Q9HCB6 807 aa21■□□□□ 0.95
NR4A1-216ENST00000550582 CABP2Q9NPB3 220 aa21■□□□□ 0.95
NR4A1-216ENST00000550582 PPP1R1BQ9UD71 204 aaPredicted RBP21■□□□□ 0.95
NR4A1-216ENST00000550582 PARP4Q9UKK3 1724 aaKnown RBP20.99■□□□□ 0.95
NR4A1-216ENST00000550582 KCNQ2O43526 872 aa20.99■□□□□ 0.95
NR4A1-216ENST00000550582 CRB1P82279 1406 aa20.98■□□□□ 0.95
NR4A1-216ENST00000550582 KIAA1210Q9ULL0 1709 aa20.96■□□□□ 0.95
NR4A1-216ENST00000550582 OVOS2A0A0G2JMS6 1433 aa20.95■□□□□ 0.95
NR4A1-216ENST00000550582 OVOS2A0A0J9YW53 1432 aa20.95■□□□□ 0.95
NR4A1-216ENST00000550582 OVOS2Q6IE36 1432 aa20.95■□□□□ 0.95
NR4A1-216ENST00000550582 NLRP6P59044 892 aa20.95■□□□□ 0.94
NR4A1-216ENST00000550582 PTF1AQ7RTS3 328 aa20.95■□□□□ 0.94
NR4A1-216ENST00000550582 PEAK1Q9H792 1746 aa20.95■□□□□ 0.94
NR4A1-216ENST00000550582 C11orf95C9JLR9 678 aaPredicted RBP20.94■□□□□ 0.94
NR4A1-216ENST00000550582 DDB1Q16531 1140 aa20.94■□□□□ 0.94
NR4A1-216ENST00000550582 CABP1Q9NZU7 370 aa20.94■□□□□ 0.94
NR4A1-216ENST00000550582 CENPJQ9HC77 1338 aaPredicted RBP20.94■□□□□ 0.94
NR4A1-216ENST00000550582 PLSCR1O15162 318 aa20.93■□□□□ 0.94
NR4A1-216ENST00000550582 TOM1L2Q6ZVM7 507 aa20.93■□□□□ 0.94
NR4A1-216ENST00000550582 AATKQ6ZMQ8 1374 aa20.93■□□□□ 0.94
NR4A1-216ENST00000550582 ANO8Q9HCE9 1232 aaPredicted RBP20.92■□□□□ 0.94
NR4A1-216ENST00000550582 LRRC37A3O60309 1634 aa20.92■□□□□ 0.94
NR4A1-216ENST00000550582 BRD4O60885 1362 aaPredicted RBP20.91■□□□□ 0.94
NR4A1-216ENST00000550582 USP6P35125 1406 aa20.91■□□□□ 0.94
NR4A1-216ENST00000550582 SLIT3O75094 1523 aa20.9■□□□□ 0.94
NR4A1-216ENST00000550582 NINLQ9Y2I6 1382 aa20.9■□□□□ 0.94
NR4A1-216ENST00000550582 DCAF8L1A6NGE4 600 aa20.9■□□□□ 0.94
NR4A1-216ENST00000550582 BCL11BQ9C0K0 894 aaPredicted RBP20.9■□□□□ 0.94
NR4A1-216ENST00000550582 PDGFDQ9GZP0 370 aaPredicted RBP20.9■□□□□ 0.94
NR4A1-216ENST00000550582 AXIN2Q9Y2T1 843 aa20.9■□□□□ 0.94
NR4A1-216ENST00000550582 SBF2Q86WG5 1849 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms