RNA–Protein interactions for RNA: ENST00000550446.5

LETMD1-224, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-224ENST00000550446 BLMP54132 1417 aaPredicted RBP27.48■■□□□ 1.99
LETMD1-224ENST00000550446 NUTM2GQ5VZR2 741 aa27.46■■□□□ 1.99
LETMD1-224ENST00000550446 PRDM11Q9NQV5 511 aa27.46■■□□□ 1.99
LETMD1-224ENST00000550446 TRPM3Q9HCF6 1732 aaPredicted RBP27.45■■□□□ 1.99
LETMD1-224ENST00000550446 CCDC61Q9Y6R9 512 aa27.45■■□□□ 1.98
LETMD1-224ENST00000550446 PLCH1Q4KWH8 1693 aa27.45■■□□□ 1.98
LETMD1-224ENST00000550446 NBPF8Q3BBV2 869 aa27.44■■□□□ 1.98
LETMD1-224ENST00000550446 NWD2Q9ULI1 1742 aa27.44■■□□□ 1.98
LETMD1-224ENST00000550446 ABCA3Q99758 1704 aa27.43■■□□□ 1.98
LETMD1-224ENST00000550446 ACEP12821 1306 aa27.42■■□□□ 1.98
LETMD1-224ENST00000550446 ATP7BP35670 1465 aa27.42■■□□□ 1.98
LETMD1-224ENST00000550446 ALS2Q96Q42 1657 aa27.41■■□□□ 1.98
LETMD1-224ENST00000550446 ZC3H6P61129 1189 aaKnown RBP27.41■■□□□ 1.98
LETMD1-224ENST00000550446 CHRNA2Q15822 529 aa27.41■■□□□ 1.98
LETMD1-224ENST00000550446 SPATA31A5Q5VU36 1347 aa27.41■■□□□ 1.98
LETMD1-224ENST00000550446 SPATA31A7Q8IWB4 1347 aa27.41■■□□□ 1.98
LETMD1-224ENST00000550446 BRWD3Q6RI45 1802 aa27.4■■□□□ 1.98
LETMD1-224ENST00000550446 ARHGEF28Q8N1W1 1705 aaKnown RBP27.39■■□□□ 1.98
LETMD1-224ENST00000550446 PLEKHG3A1L390 1219 aa27.39■■□□□ 1.98
LETMD1-224ENST00000550446 KIAA0232Q92628 1395 aa27.38■■□□□ 1.97
LETMD1-224ENST00000550446 SRPK2P78362 688 aaKnown RBP27.38■■□□□ 1.97
LETMD1-224ENST00000550446 STRN4Q9NRL3 753 aa27.38■■□□□ 1.97
LETMD1-224ENST00000550446 FAM182BQ5T319 152 aa27.37■■□□□ 1.97
LETMD1-224ENST00000550446 COL14A1Q05707 1796 aaKnown RBP27.36■■□□□ 1.97
LETMD1-224ENST00000550446 ABTB2Q8N961 1025 aa27.36■■□□□ 1.97
LETMD1-224ENST00000550446 POLR3AO14802 1390 aaPredicted RBP27.35■■□□□ 1.97
LETMD1-224ENST00000550446 CABP2Q9NPB3 220 aa27.35■■□□□ 1.97
LETMD1-224ENST00000550446 CENPJQ9HC77 1338 aaPredicted RBP27.34■■□□□ 1.97
LETMD1-224ENST00000550446 EVA1CP58658 441 aa27.33■■□□□ 1.97
LETMD1-224ENST00000550446 L3MBTL2Q969R5 705 aa27.33■■□□□ 1.97
LETMD1-224ENST00000550446 NRAPQ86VF7 1730 aa27.31■■□□□ 1.96
LETMD1-224ENST00000550446 BAG6P46379 1132 aa27.31■■□□□ 1.96
LETMD1-224ENST00000550446 SPATA31A1Q5TZJ5 1347 aa27.31■■□□□ 1.96
LETMD1-224ENST00000550446 SIN3AQ96ST3 1273 aa27.3■■□□□ 1.96
LETMD1-224ENST00000550446 USP35Q9P2H5 1018 aa27.3■■□□□ 1.96
LETMD1-224ENST00000550446 ITSN1Q15811 1721 aa27.29■■□□□ 1.96
LETMD1-224ENST00000550446 KIAA1210Q9ULL0 1709 aa27.28■■□□□ 1.96
LETMD1-224ENST00000550446 NEUROD1Q13562 356 aa27.28■■□□□ 1.96
LETMD1-224ENST00000550446 NLRP13Q86W25 1043 aa27.27■■□□□ 1.96
LETMD1-224ENST00000550446 PPIP5K1Q6PFW1 1433 aa27.26■■□□□ 1.95
LETMD1-224ENST00000550446 EN1Q05925 392 aaPredicted RBP27.26■■□□□ 1.95
LETMD1-224ENST00000550446 CABP1Q9NZU7 370 aa27.26■■□□□ 1.95
LETMD1-224ENST00000550446 CRYBG1Q9Y4K1 1723 aa27.24■■□□□ 1.95
LETMD1-224ENST00000550446 GCP02774 474 aa27.23■■□□□ 1.95
LETMD1-224ENST00000550446 PSDA5PKW4 1024 aaPredicted RBP27.22■■□□□ 1.95
LETMD1-224ENST00000550446 LARP1Q6PKG0 1096 aaKnown RBP27.22■■□□□ 1.95
LETMD1-224ENST00000550446 USP19O94966 1318 aa27.2■■□□□ 1.95
LETMD1-224ENST00000550446 ZBTB7CA1YPR0 619 aa27.2■■□□□ 1.94
LETMD1-224ENST00000550446 FAM196AQ6ZSG2 479 aa27.2■■□□□ 1.94
LETMD1-224ENST00000550446 TOPAZ1Q8N9V7 1692 aa27.2■■□□□ 1.94
LETMD1-224ENST00000550446 TRIM37O94972 964 aa27.19■■□□□ 1.94
LETMD1-224ENST00000550446 NLRP6P59044 892 aa27.19■■□□□ 1.94
LETMD1-224ENST00000550446 PDE3BQ13370 1112 aa27.18■■□□□ 1.94
LETMD1-224ENST00000550446 BARGINQ6ZT62 677 aa27.18■■□□□ 1.94
LETMD1-224ENST00000550446 PHRF1Q9P1Y6 1649 aaKnown RBP27.18■■□□□ 1.94
LETMD1-224ENST00000550446 CPDO75976 1380 aa27.18■■□□□ 1.94
LETMD1-224ENST00000550446 EVC2Q86UK5 1308 aa27.17■■□□□ 1.94
LETMD1-224ENST00000550446 SSH2Q76I76 1423 aa27.17■■□□□ 1.94
LETMD1-224ENST00000550446 TCP11L2Q8N4U5 519 aa27.17■■□□□ 1.94
LETMD1-224ENST00000550446 CAMTA1Q9Y6Y1 1673 aa27.15■■□□□ 1.94
LETMD1-224ENST00000550446 THSD7AQ9UPZ6 1657 aa27.14■■□□□ 1.94
LETMD1-224ENST00000550446 BRD4O60885 1362 aaPredicted RBP27.14■■□□□ 1.94
LETMD1-224ENST00000550446 EZH2Q15910 746 aaKnown RBP27.14■■□□□ 1.94
LETMD1-224ENST00000550446 ROCK2O75116 1388 aaKnown RBP27.13■■□□□ 1.93
LETMD1-224ENST00000550446 APBA3O96018 575 aa27.13■■□□□ 1.93
LETMD1-224ENST00000550446 NRKQ7Z2Y5 1582 aa27.11■■□□□ 1.93
LETMD1-224ENST00000550446 USP6P35125 1406 aa27.11■■□□□ 1.93
LETMD1-224ENST00000550446 R3HDM1Q15032 1099 aaKnown RBP27.11■■□□□ 1.93
LETMD1-224ENST00000550446 THRAP3Q9Y2W1 955 aaKnown RBP27.11■■□□□ 1.93
LETMD1-224ENST00000550446 QRICH2Q9H0J4 1663 aa27.09■■□□□ 1.93
LETMD1-224ENST00000550446 CAMKK2Q96RR4 588 aa27.09■■□□□ 1.93
LETMD1-224ENST00000550446 ZNF692Q9BU19 519 aaPredicted RBP27.08■■□□□ 1.93
LETMD1-224ENST00000550446 RGPD1P0DJD0 1748 aa27.05■■□□□ 1.92
LETMD1-224ENST00000550446 TTC21BQ7Z4L5 1316 aa27.05■■□□□ 1.92
LETMD1-224ENST00000550446 DISP2A7MBM2 1401 aa27.05■■□□□ 1.92
LETMD1-224ENST00000550446 SOX12O15370 315 aa27.04■■□□□ 1.92
LETMD1-224ENST00000550446 AATKQ6ZMQ8 1374 aa27.04■■□□□ 1.92
LETMD1-224ENST00000550446 COL5A2P05997 1499 aaPredicted RBP27.04■■□□□ 1.92
LETMD1-224ENST00000550446 TOM1L2Q6ZVM7 507 aa27.03■■□□□ 1.92
LETMD1-224ENST00000550446 AXIN2Q9Y2T1 843 aa27.03■■□□□ 1.92
LETMD1-224ENST00000550446 LMO7Q8WWI1 1683 aa27.02■■□□□ 1.92
LETMD1-224ENST00000550446 CRB1P82279 1406 aa27.01■■□□□ 1.91
LETMD1-224ENST00000550446 TRPM1Q7Z4N2 1603 aa27.01■■□□□ 1.91
LETMD1-224ENST00000550446 KCNH5Q8NCM2 988 aa27■■□□□ 1.91
LETMD1-224ENST00000550446 ARHGEF25Q86VW2 580 aa26.99■■□□□ 1.91
LETMD1-224ENST00000550446 CARD11Q9BXL7 1154 aa26.99■■□□□ 1.91
LETMD1-224ENST00000550446 DDB1Q16531 1140 aa26.97■■□□□ 1.91
LETMD1-224ENST00000550446 KTN1Q86UP2 1357 aaKnown RBP26.97■■□□□ 1.91
LETMD1-224ENST00000550446 TNS1Q9HBL0 1735 aaKnown RBP26.96■■□□□ 1.91
LETMD1-224ENST00000550446 SLIT3O75094 1523 aa26.96■■□□□ 1.91
LETMD1-224ENST00000550446 TTC21AQ8NDW8 1320 aa26.96■■□□□ 1.91
LETMD1-224ENST00000550446 PARD3Q8TEW0 1356 aa26.96■■□□□ 1.91
LETMD1-224ENST00000550446 CSB-PGBD3P0DP91 1061 aa26.95■■□□□ 1.9
LETMD1-224ENST00000550446 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.95■■□□□ 1.9
LETMD1-224ENST00000550446 WDR17Q8IZU2 1322 aa26.94■■□□□ 1.9
LETMD1-224ENST00000550446 C11orf95C9JLR9 678 aaPredicted RBP26.94■■□□□ 1.9
LETMD1-224ENST00000550446 NBPF14Q5TI25 921 aa26.94■■□□□ 1.9
LETMD1-224ENST00000550446 TMC1Q8TDI8 760 aa26.94■■□□□ 1.9
LETMD1-224ENST00000550446 CPSF1Q10570 1443 aaKnown RBP26.92■■□□□ 1.9
LETMD1-224ENST00000550446 PIK3C2AO00443 1686 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms