RNA–Protein interactions for RNA: ENST00000550345.5

PFKM-219, Transcript of phosphofructokinase, muscle, humanhuman

TSL 4

Gene PFKM, Length 762 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-219ENST00000550345 CAMKK2Q96RR4 588 aa13.39□□□□□ -0.27
PFKM-219ENST00000550345 TRAK1Q9UPV9 953 aa13.39□□□□□ -0.27
PFKM-219ENST00000550345 ABCA3Q99758 1704 aa13.39□□□□□ -0.27
PFKM-219ENST00000550345 CAMTA1Q9Y6Y1 1673 aa13.38□□□□□ -0.27
PFKM-219ENST00000550345 SENP3-EIF4A1A0A087X0R7 540 aa13.38□□□□□ -0.27
PFKM-219ENST00000550345 FAM83GA6ND36 823 aa13.38□□□□□ -0.27
PFKM-219ENST00000550345 SAFB2Q14151 953 aaKnown RBP eCLIP13.38□□□□□ -0.27
PFKM-219ENST00000550345 PRAM1Q96QH2 718 aa13.38□□□□□ -0.27
PFKM-219ENST00000550345 NRAPQ86VF7 1730 aa13.38□□□□□ -0.27
PFKM-219ENST00000550345 RGPD8O14715 1765 aaPredicted RBP13.37□□□□□ -0.27
PFKM-219ENST00000550345 SIRT1Q96EB6 747 aa13.37□□□□□ -0.27
PFKM-219ENST00000550345 PPP1R1BQ9UD71 204 aaPredicted RBP13.37□□□□□ -0.27
PFKM-219ENST00000550345 DLC1Q96QB1 1528 aa13.36□□□□□ -0.27
PFKM-219ENST00000550345 KIF1AQ12756 1690 aa13.36□□□□□ -0.27
PFKM-219ENST00000550345 TNS3Q68CZ2 1445 aa13.36□□□□□ -0.27
PFKM-219ENST00000550345 TRIM37O94972 964 aa13.35□□□□□ -0.27
PFKM-219ENST00000550345 LMOD2Q6P5Q4 547 aa13.35□□□□□ -0.27
PFKM-219ENST00000550345 ZNF784Q8NCA9 323 aaPredicted RBP13.35□□□□□ -0.27
PFKM-219ENST00000550345 NUP188Q5SRE5 1749 aa13.34□□□□□ -0.27
PFKM-219ENST00000550345 FMN2Q9NZ56 1722 aa13.34□□□□□ -0.27
PFKM-219ENST00000550345 NBPF8Q3BBV2 869 aa13.34□□□□□ -0.27
PFKM-219ENST00000550345 BTG4Q9NY30 223 aa13.34□□□□□ -0.27
PFKM-219ENST00000550345 RREB1Q92766 1687 aa13.34□□□□□ -0.27
PFKM-219ENST00000550345 ADGRB2O60241 1585 aa13.33□□□□□ -0.28
PFKM-219ENST00000550345 APBA3O96018 575 aa13.33□□□□□ -0.28
PFKM-219ENST00000550345 HIRIP3Q9BW71 556 aaPredicted RBP13.33□□□□□ -0.28
PFKM-219ENST00000550345 SPON1Q9HCB6 807 aa13.33□□□□□ -0.28
PFKM-219ENST00000550345 POGKQ9P215 609 aa13.33□□□□□ -0.28
PFKM-219ENST00000550345 CEP350Q5VT06 3117 aa13.33□□□□□ -0.28
PFKM-219ENST00000550345 KIAA1210Q9ULL0 1709 aa13.33□□□□□ -0.28
PFKM-219ENST00000550345 NINLQ9Y2I6 1382 aa13.32□□□□□ -0.28
PFKM-219ENST00000550345 THSD7AQ9UPZ6 1657 aa13.32□□□□□ -0.28
PFKM-219ENST00000550345 PSME1Q06323 249 aa13.32□□□□□ -0.28
PFKM-219ENST00000550345 MINK1Q8N4C8 1332 aaPredicted RBP13.32□□□□□ -0.28
PFKM-219ENST00000550345 ARHGEF28Q8N1W1 1705 aaKnown RBP13.31□□□□□ -0.28
PFKM-219ENST00000550345 KCNQ2O43526 872 aa13.31□□□□□ -0.28
PFKM-219ENST00000550345 SPATA31A5Q5VU36 1347 aa13.31□□□□□ -0.28
PFKM-219ENST00000550345 SPATA31A7Q8IWB4 1347 aa13.31□□□□□ -0.28
PFKM-219ENST00000550345 CHD4Q14839 1912 aa13.31□□□□□ -0.28
PFKM-219ENST00000550345 PARD3Q8TEW0 1356 aa13.31□□□□□ -0.28
PFKM-219ENST00000550345 C1QTNF8P60827 252 aa13.3□□□□□ -0.28
PFKM-219ENST00000550345 NBPF14Q5TI25 921 aa13.3□□□□□ -0.28
PFKM-219ENST00000550345 PPP4R3CPQ6ZMV5 832 aa13.3□□□□□ -0.28
PFKM-219ENST00000550345 PHF8Q9UPP1 1060 aa13.3□□□□□ -0.28
PFKM-219ENST00000550345 TRPM1Q7Z4N2 1603 aa13.29□□□□□ -0.28
PFKM-219ENST00000550345 FAM196AQ6ZSG2 479 aa13.29□□□□□ -0.28
PFKM-219ENST00000550345 COL14A1Q05707 1796 aaKnown RBP13.29□□□□□ -0.28
PFKM-219ENST00000550345 SBNO1A3KN83 1393 aa13.29□□□□□ -0.28
PFKM-219ENST00000550345 ARHGEF10O15013 1369 aa13.29□□□□□ -0.28
PFKM-219ENST00000550345 TONSLQ96HA7 1378 aa13.28□□□□□ -0.28
PFKM-219ENST00000550345 PRR36Q9H6K5 1346 aa13.27□□□□□ -0.29
PFKM-219ENST00000550345 C1QBPQ07021 282 aaKnown RBP13.26□□□□□ -0.29
PFKM-219ENST00000550345 WASLO00401 505 aaPredicted RBP13.25□□□□□ -0.29
PFKM-219ENST00000550345 ROCK2O75116 1388 aaKnown RBP13.24□□□□□ -0.29
PFKM-219ENST00000550345 PMFBP1Q8TBY8 1022 aa13.23□□□□□ -0.29
PFKM-219ENST00000550345 CDK19Q9BWU1 502 aa13.23□□□□□ -0.29
PFKM-219ENST00000550345 NRKQ7Z2Y5 1582 aa13.23□□□□□ -0.29
PFKM-219ENST00000550345 TRPM3Q9HCF6 1732 aaPredicted RBP13.22□□□□□ -0.29
PFKM-219ENST00000550345 SPATA31A1Q5TZJ5 1347 aa13.22□□□□□ -0.29
PFKM-219ENST00000550345 CENPJQ9HC77 1338 aaPredicted RBP13.22□□□□□ -0.29
PFKM-219ENST00000550345 TULP4Q9NRJ4 1543 aa13.22□□□□□ -0.29
PFKM-219ENST00000550345 ANKARQ7Z5J8 1434 aa13.22□□□□□ -0.29
PFKM-219ENST00000550345 GPRASP1Q5JY77 1395 aa13.21□□□□□ -0.29
PFKM-219ENST00000550345 GOLGB1Q14789 3259 aaKnown RBP13.21□□□□□ -0.29
PFKM-219ENST00000550345 ALS2Q96Q42 1657 aa13.21□□□□□ -0.3
PFKM-219ENST00000550345 NUDT16Q96DE0 195 aaKnown RBP13.2□□□□□ -0.3
PFKM-219ENST00000550345 USP35Q9P2H5 1018 aa13.2□□□□□ -0.3
PFKM-219ENST00000550345 ATP7BP35670 1465 aa13.2□□□□□ -0.3
PFKM-219ENST00000550345 MYOM1P52179 1685 aa13.2□□□□□ -0.3
PFKM-219ENST00000550345 QRICH2Q9H0J4 1663 aa13.2□□□□□ -0.3
PFKM-219ENST00000550345 CASZ1Q86V15 1759 aa13.2□□□□□ -0.3
PFKM-219ENST00000550345 CRYBG1Q9Y4K1 1723 aa13.19□□□□□ -0.3
PFKM-219ENST00000550345 PDE3BQ13370 1112 aa13.19□□□□□ -0.3
PFKM-219ENST00000550345 CCER1Q8TC90 406 aaPredicted RBP13.19□□□□□ -0.3
PFKM-219ENST00000550345 PDGFDQ9GZP0 370 aaPredicted RBP13.19□□□□□ -0.3
PFKM-219ENST00000550345 PRDM11Q9NQV5 511 aa13.19□□□□□ -0.3
PFKM-219ENST00000550345 STRN4Q9NRL3 753 aa13.19□□□□□ -0.3
PFKM-219ENST00000550345 CARD11Q9BXL7 1154 aa13.18□□□□□ -0.3
PFKM-219ENST00000550345 CABP2Q9NPB3 220 aa13.18□□□□□ -0.3
PFKM-219ENST00000550345 CLSPNQ9HAW4 1339 aa13.17□□□□□ -0.3
PFKM-219ENST00000550345 ZBTB7AO95365 584 aa13.17□□□□□ -0.3
PFKM-219ENST00000550345 CHRNA2Q15822 529 aa13.17□□□□□ -0.3
PFKM-219ENST00000550345 ANO8Q9HCE9 1232 aaPredicted RBP13.17□□□□□ -0.3
PFKM-219ENST00000550345 ATF5Q9Y2D1 282 aaPredicted RBP13.16□□□□□ -0.3
PFKM-219ENST00000550345 EIF3AQ14152 1382 aaKnown RBP13.16□□□□□ -0.3
PFKM-219ENST00000550345 PTGER2P43116 358 aa13.15□□□□□ -0.3
PFKM-219ENST00000550345 SRPK2P78362 688 aaKnown RBP13.15□□□□□ -0.3
PFKM-219ENST00000550345 SYT17Q9BSW7 474 aa13.15□□□□□ -0.3
PFKM-219ENST00000550345 KIAA0232Q92628 1395 aa13.15□□□□□ -0.3
PFKM-219ENST00000550345 TOPAZ1Q8N9V7 1692 aa13.15□□□□□ -0.31
PFKM-219ENST00000550345 SBF2Q86WG5 1849 aa13.14□□□□□ -0.31
PFKM-219ENST00000550345 GIGYF1O75420 1035 aaPredicted RBP13.14□□□□□ -0.31
PFKM-219ENST00000550345 BARGINQ6ZT62 677 aa13.14□□□□□ -0.31
PFKM-219ENST00000550345 NGDNQ8NEJ9 315 aaKnown RBP13.14□□□□□ -0.31
PFKM-219ENST00000550345 FHDC1Q9C0D6 1143 aaPredicted RBP13.14□□□□□ -0.31
PFKM-219ENST00000550345 RNF216Q9NWF9 866 aaPredicted RBP13.14□□□□□ -0.31
PFKM-219ENST00000550345 PAK3O75914 559 aaPredicted RBP13.13□□□□□ -0.31
PFKM-219ENST00000550345 CNKSR2Q8WXI2 1034 aa13.13□□□□□ -0.31
PFKM-219ENST00000550345 CCDC61Q9Y6R9 512 aa13.13□□□□□ -0.31
PFKM-219ENST00000550345 ITSN1Q15811 1721 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms