RNA–Protein interactions for RNA: ENST00000550254.1

TUBA1A-206, Transcript of tubulin alpha 1a, humanhuman

TSL 2

Gene TUBA1A, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-206ENST00000550254 RXRBP28702 533 aa25.52■■□□□ 1.68
TUBA1A-206ENST00000550254 CABP1Q9NZU7 370 aa25.51■■□□□ 1.67
TUBA1A-206ENST00000550254 BCL9LQ86UU0 1499 aa25.51■■□□□ 1.67
TUBA1A-206ENST00000550254 TIMELESSQ9UNS1 1208 aa25.5■■□□□ 1.67
TUBA1A-206ENST00000550254 HAP1P54257 671 aaPredicted RBP25.49■■□□□ 1.67
TUBA1A-206ENST00000550254 SLIT2O94813 1529 aa25.48■■□□□ 1.67
TUBA1A-206ENST00000550254 ATRNO75882 1429 aa25.47■■□□□ 1.67
TUBA1A-206ENST00000550254 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.47■■□□□ 1.67
TUBA1A-206ENST00000550254 RBM6P78332 1123 aaKnown RBP25.47■■□□□ 1.67
TUBA1A-206ENST00000550254 CDK12Q9NYV4 1490 aaPredicted RBP25.47■■□□□ 1.67
TUBA1A-206ENST00000550254 CCER1Q8TC90 406 aaPredicted RBP25.46■■□□□ 1.67
TUBA1A-206ENST00000550254 TRPC5Q9UL62 973 aaPredicted RBP25.46■■□□□ 1.67
TUBA1A-206ENST00000550254 PLCH1Q4KWH8 1693 aa25.45■■□□□ 1.67
TUBA1A-206ENST00000550254 PHRF1Q9P1Y6 1649 aaKnown RBP25.45■■□□□ 1.66
TUBA1A-206ENST00000550254 USP6P35125 1406 aa25.43■■□□□ 1.66
TUBA1A-206ENST00000550254 AKAP12Q02952 1782 aa25.43■■□□□ 1.66
TUBA1A-206ENST00000550254 NWD2Q9ULI1 1742 aa25.43■■□□□ 1.66
TUBA1A-206ENST00000550254 ST20-MTHFSA0A0A6YYL1 179 aa25.42■■□□□ 1.66
TUBA1A-206ENST00000550254 FAM83GA6ND36 823 aa25.42■■□□□ 1.66
TUBA1A-206ENST00000550254 NUTM2GQ5VZR2 741 aa25.42■■□□□ 1.66
TUBA1A-206ENST00000550254 ATAD2Q6PL18 1390 aa25.42■■□□□ 1.66
TUBA1A-206ENST00000550254 UNC5CLQ8IV45 518 aa25.41■■□□□ 1.66
TUBA1A-206ENST00000550254 TESK2Q96S53 571 aa25.41■■□□□ 1.66
TUBA1A-206ENST00000550254 BRD4O60885 1362 aaPredicted RBP25.41■■□□□ 1.66
TUBA1A-206ENST00000550254 RGS12O14924 1447 aa25.4■■□□□ 1.66
TUBA1A-206ENST00000550254 SSH2Q76I76 1423 aa25.4■■□□□ 1.66
TUBA1A-206ENST00000550254 ABTB2Q8N961 1025 aa25.4■■□□□ 1.66
TUBA1A-206ENST00000550254 COL14A1Q05707 1796 aaKnown RBP25.39■■□□□ 1.65
TUBA1A-206ENST00000550254 CPSF1Q10570 1443 aaKnown RBP25.37■■□□□ 1.65
TUBA1A-206ENST00000550254 NRAPQ86VF7 1730 aa25.37■■□□□ 1.65
TUBA1A-206ENST00000550254 USP47Q96K76 1375 aa25.36■■□□□ 1.65
TUBA1A-206ENST00000550254 GJD4Q96KN9 370 aaPredicted RBP25.36■■□□□ 1.65
TUBA1A-206ENST00000550254 ZNF692Q9BU19 519 aaPredicted RBP25.36■■□□□ 1.65
TUBA1A-206ENST00000550254 GLI3P10071 1580 aa25.35■■□□□ 1.65
TUBA1A-206ENST00000550254 NRKQ7Z2Y5 1582 aa25.35■■□□□ 1.65
TUBA1A-206ENST00000550254 PIK3C2AO00443 1686 aa25.35■■□□□ 1.65
TUBA1A-206ENST00000550254 USP19O94966 1318 aa25.35■■□□□ 1.65
TUBA1A-206ENST00000550254 MON2Q7Z3U7 1717 aa25.34■■□□□ 1.65
TUBA1A-206ENST00000550254 PUS7Q96PZ0 661 aaKnown RBP25.34■■□□□ 1.65
TUBA1A-206ENST00000550254 CD163L1Q9NR16 1453 aa25.34■■□□□ 1.65
TUBA1A-206ENST00000550254 NLRP13Q86W25 1043 aa25.33■■□□□ 1.65
TUBA1A-206ENST00000550254 KIAA0232Q92628 1395 aa25.32■■□□□ 1.64
TUBA1A-206ENST00000550254 BTG4Q9NY30 223 aa25.32■■□□□ 1.64
TUBA1A-206ENST00000550254 TTC21BQ7Z4L5 1316 aa25.32■■□□□ 1.64
TUBA1A-206ENST00000550254 ZC3H6P61129 1189 aaKnown RBP25.31■■□□□ 1.64
TUBA1A-206ENST00000550254 VPS72Q15906 364 aa25.31■■□□□ 1.64
TUBA1A-206ENST00000550254 KTN1Q86UP2 1357 aaKnown RBP25.31■■□□□ 1.64
TUBA1A-206ENST00000550254 SLC12A5Q9H2X9 1139 aa25.3■■□□□ 1.64
TUBA1A-206ENST00000550254 PRDM11Q9NQV5 511 aa25.3■■□□□ 1.64
TUBA1A-206ENST00000550254 NLRP6P59044 892 aa25.29■■□□□ 1.64
TUBA1A-206ENST00000550254 TMC1Q8TDI8 760 aa25.29■■□□□ 1.64
TUBA1A-206ENST00000550254 SLIT3O75094 1523 aa25.28■■□□□ 1.64
TUBA1A-206ENST00000550254 SLC24A1O60721 1099 aa25.28■■□□□ 1.64
TUBA1A-206ENST00000550254 GCP02774 474 aa25.28■■□□□ 1.64
TUBA1A-206ENST00000550254 CHRNA2Q15822 529 aa25.28■■□□□ 1.64
TUBA1A-206ENST00000550254 TTC21AQ8NDW8 1320 aa25.26■■□□□ 1.63
TUBA1A-206ENST00000550254 CPDO75976 1380 aa25.25■■□□□ 1.63
TUBA1A-206ENST00000550254 LMO7Q8WWI1 1683 aa25.24■■□□□ 1.63
TUBA1A-206ENST00000550254 UPF1Q92900 1129 aaKnown RBP eCLIP25.24■■□□□ 1.63
TUBA1A-206ENST00000550254 CCDC9Q9Y3X0 531 aaKnown RBP25.24■■□□□ 1.63
TUBA1A-206ENST00000550254 A0A1W2PP64 1363 aa25.23■■□□□ 1.63
TUBA1A-206ENST00000550254 TMF1P82094 1093 aa25.23■■□□□ 1.63
TUBA1A-206ENST00000550254 HDGFL2Q7Z4V5 671 aaPredicted RBP25.22■■□□□ 1.63
TUBA1A-206ENST00000550254 CAMTA1Q9Y6Y1 1673 aa25.22■■□□□ 1.63
TUBA1A-206ENST00000550254 BRWD3Q6RI45 1802 aa25.21■■□□□ 1.63
TUBA1A-206ENST00000550254 ONECUT3O60422 494 aaPredicted RBP25.21■■□□□ 1.63
TUBA1A-206ENST00000550254 NINLQ9Y2I6 1382 aa25.2■■□□□ 1.63
TUBA1A-206ENST00000550254 USP54Q70EL1 1684 aa25.2■■□□□ 1.63
TUBA1A-206ENST00000550254 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.2■■□□□ 1.62
TUBA1A-206ENST00000550254 TERF2IPQ9NYB0 399 aa25.2■■□□□ 1.62
TUBA1A-206ENST00000550254 ZRANB1Q9UGI0 708 aa25.19■■□□□ 1.62
TUBA1A-206ENST00000550254 EDC4Q6P2E9 1401 aaKnown RBP25.19■■□□□ 1.62
TUBA1A-206ENST00000550254 SPATA31A5Q5VU36 1347 aa25.18■■□□□ 1.62
TUBA1A-206ENST00000550254 SPATA31A7Q8IWB4 1347 aa25.18■■□□□ 1.62
TUBA1A-206ENST00000550254 COL18A1P39060 1754 aa25.18■■□□□ 1.62
TUBA1A-206ENST00000550254 USP31Q70CQ4 1352 aa25.18■■□□□ 1.62
TUBA1A-206ENST00000550254 NME9Q86XW9 330 aa25.17■■□□□ 1.62
TUBA1A-206ENST00000550254 SEPT12Q8IYM1 358 aa25.17■■□□□ 1.62
TUBA1A-206ENST00000550254 STRN4Q9NRL3 753 aa25.17■■□□□ 1.62
TUBA1A-206ENST00000550254 NFAT5O94916 1531 aa25.15■■□□□ 1.62
TUBA1A-206ENST00000550254 FAM98CQ17RN3 349 aaKnown RBP25.14■■□□□ 1.62
TUBA1A-206ENST00000550254 KCNH5Q8NCM2 988 aa25.14■■□□□ 1.62
TUBA1A-206ENST00000550254 SPATA31A1Q5TZJ5 1347 aa25.13■■□□□ 1.61
TUBA1A-206ENST00000550254 ZBTB7CA1YPR0 619 aa25.13■■□□□ 1.61
TUBA1A-206ENST00000550254 AATKQ6ZMQ8 1374 aa25.13■■□□□ 1.61
TUBA1A-206ENST00000550254 MYOM1P52179 1685 aa25.13■■□□□ 1.61
TUBA1A-206ENST00000550254 SOX12O15370 315 aa25.12■■□□□ 1.61
TUBA1A-206ENST00000550254 EVA1CP58658 441 aa25.12■■□□□ 1.61
TUBA1A-206ENST00000550254 CDCA8Q53HL2 280 aa25.12■■□□□ 1.61
TUBA1A-206ENST00000550254 ARHGEF25Q86VW2 580 aa25.12■■□□□ 1.61
TUBA1A-206ENST00000550254 ANKRD36BQ8N2N9 1353 aa25.12■■□□□ 1.61
TUBA1A-206ENST00000550254 COL5A2P05997 1499 aaPredicted RBP25.12■■□□□ 1.61
TUBA1A-206ENST00000550254 THSD7AQ9UPZ6 1657 aa25.11■■□□□ 1.61
TUBA1A-206ENST00000550254 LARP1Q6PKG0 1096 aaKnown RBP25.11■■□□□ 1.61
TUBA1A-206ENST00000550254 RGPD5Q99666 1765 aa25.1■■□□□ 1.61
TUBA1A-206ENST00000550254 HSPA5P11021 654 aaKnown RBP25.1■■□□□ 1.61
TUBA1A-206ENST00000550254 EIF4G2P78344 907 aaKnown RBP eCLIP25.1■■□□□ 1.61
TUBA1A-206ENST00000550254 AXIN2Q9Y2T1 843 aa25.09■■□□□ 1.61
TUBA1A-206ENST00000550254 OVOS2A0A0J9YW53 1432 aa25.09■■□□□ 1.61
TUBA1A-206ENST00000550254 OVOS2Q6IE36 1432 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms