RNA–Protein interactions for RNA: ENST00000550064.5

CACNB3-213, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 746 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-213ENST00000550064 LRRC7Q96NW7 1537 aa16.35■□□□□ 0.21
CACNB3-213ENST00000550064 NRKQ7Z2Y5 1582 aa16.34■□□□□ 0.21
CACNB3-213ENST00000550064 NME9Q86XW9 330 aa16.34■□□□□ 0.21
CACNB3-213ENST00000550064 ATF3P18847 181 aa16.33■□□□□ 0.2
CACNB3-213ENST00000550064 ESCO1Q5FWF5 840 aa16.33■□□□□ 0.2
CACNB3-213ENST00000550064 SSH2Q76I76 1423 aa16.33■□□□□ 0.2
CACNB3-213ENST00000550064 DCCP43146 1447 aa16.32■□□□□ 0.2
CACNB3-213ENST00000550064 ZRANB1Q9UGI0 708 aa16.32■□□□□ 0.2
CACNB3-213ENST00000550064 C1orf167Q5SNV9 1468 aa16.31■□□□□ 0.2
CACNB3-213ENST00000550064 ORAI2Q96SN7 254 aa16.31■□□□□ 0.2
CACNB3-213ENST00000550064 MSH6P52701 1360 aa16.3■□□□□ 0.2
CACNB3-213ENST00000550064 MST1RQ04912 1400 aa16.29■□□□□ 0.2
CACNB3-213ENST00000550064 TTC21AQ8NDW8 1320 aa16.29■□□□□ 0.2
CACNB3-213ENST00000550064 CADPS2Q86UW7 1296 aa16.29■□□□□ 0.2
CACNB3-213ENST00000550064 COG3Q96JB2 828 aa16.29■□□□□ 0.2
CACNB3-213ENST00000550064 MTHFSP49914 203 aa16.28■□□□□ 0.2
CACNB3-213ENST00000550064 SCAF1Q9H7N4 1312 aaKnown RBP16.27■□□□□ 0.2
CACNB3-213ENST00000550064 CENPBP07199 599 aaPredicted RBP16.27■□□□□ 0.2
CACNB3-213ENST00000550064 HNRNPUQ00839 825 aaKnown RBP eCLIP16.26■□□□□ 0.19
CACNB3-213ENST00000550064 PSME1Q06323 249 aa16.26■□□□□ 0.19
CACNB3-213ENST00000550064 KIF1AQ12756 1690 aa16.26■□□□□ 0.19
CACNB3-213ENST00000550064 OVOS2A0A0J9YW53 1432 aa16.25■□□□□ 0.19
CACNB3-213ENST00000550064 OVOS2Q6IE36 1432 aa16.25■□□□□ 0.19
CACNB3-213ENST00000550064 USP31Q70CQ4 1352 aa16.25■□□□□ 0.19
CACNB3-213ENST00000550064 FOXO3O43524 673 aa16.24■□□□□ 0.19
CACNB3-213ENST00000550064 FBLN1P23142 703 aa16.24■□□□□ 0.19
CACNB3-213ENST00000550064 CFAP53Q96M91 514 aa16.24■□□□□ 0.19
CACNB3-213ENST00000550064 PIK3C2AO00443 1686 aa16.24■□□□□ 0.19
CACNB3-213ENST00000550064 MAP2P11137 1827 aaKnown RBP16.24■□□□□ 0.19
CACNB3-213ENST00000550064 PAK3O75914 559 aaPredicted RBP16.23■□□□□ 0.19
CACNB3-213ENST00000550064 WDR43Q15061 677 aaKnown RBP eCLIP16.23■□□□□ 0.19
CACNB3-213ENST00000550064 ADAMTS8Q9UP79 889 aa16.23■□□□□ 0.19
CACNB3-213ENST00000550064 AATKQ6ZMQ8 1374 aa16.23■□□□□ 0.19
CACNB3-213ENST00000550064 POLKQ9UBT6 870 aa16.22■□□□□ 0.19
CACNB3-213ENST00000550064 LTBP4Q8N2S1 1624 aa16.21■□□□□ 0.19
CACNB3-213ENST00000550064 NLRP6P59044 892 aa16.21■□□□□ 0.19
CACNB3-213ENST00000550064 KRT28Q7Z3Y7 464 aa16.21■□□□□ 0.19
CACNB3-213ENST00000550064 ABTB2Q8N961 1025 aa16.21■□□□□ 0.19
CACNB3-213ENST00000550064 INSRP06213 1382 aa16.21■□□□□ 0.19
CACNB3-213ENST00000550064 SHPRHQ149N8 1683 aa16.21■□□□□ 0.18
CACNB3-213ENST00000550064 XPCQ01831 940 aaPredicted RBP16.2■□□□□ 0.18
CACNB3-213ENST00000550064 USP54Q70EL1 1684 aa16.2■□□□□ 0.18
CACNB3-213ENST00000550064 MARF1Q9Y4F3 1742 aaKnown RBP16.19■□□□□ 0.18
CACNB3-213ENST00000550064 COL3A1P02461 1466 aaPredicted RBP16.19■□□□□ 0.18
CACNB3-213ENST00000550064 NUTM2GQ5VZR2 741 aa16.19■□□□□ 0.18
CACNB3-213ENST00000550064 SLAIN2Q9P270 581 aa16.19■□□□□ 0.18
CACNB3-213ENST00000550064 EMILIN1Q9Y6C2 1016 aa16.19■□□□□ 0.18
CACNB3-213ENST00000550064 TRPM3Q9HCF6 1732 aaPredicted RBP16.19■□□□□ 0.18
CACNB3-213ENST00000550064 BLMP54132 1417 aaPredicted RBP16.19■□□□□ 0.18
CACNB3-213ENST00000550064 SMG6Q86US8 1419 aaKnown RBP16.19■□□□□ 0.18
CACNB3-213ENST00000550064 PNPLA6Q8IY17 1366 aa16.18■□□□□ 0.18
CACNB3-213ENST00000550064 PPM1GO15355 546 aaPredicted RBP16.18■□□□□ 0.18
CACNB3-213ENST00000550064 RRS1Q15050 365 aaKnown RBP16.18■□□□□ 0.18
CACNB3-213ENST00000550064 BRINP3Q76B58 766 aa16.17■□□□□ 0.18
CACNB3-213ENST00000550064 DDX17Q92841 729 aaKnown RBP16.17■□□□□ 0.18
CACNB3-213ENST00000550064 SENP3-EIF4A1A0A087X0R7 540 aa16.16■□□□□ 0.18
CACNB3-213ENST00000550064 SOX12O15370 315 aa16.16■□□□□ 0.18
CACNB3-213ENST00000550064 NPHP3Q7Z494 1330 aa16.16■□□□□ 0.18
CACNB3-213ENST00000550064 DIAPH1O60610 1272 aaKnown RBP16.15■□□□□ 0.18
CACNB3-213ENST00000550064 CDK12Q9NYV4 1490 aaPredicted RBP16.15■□□□□ 0.18
CACNB3-213ENST00000550064 ZBED9Q6R2W3 1325 aa16.15■□□□□ 0.18
CACNB3-213ENST00000550064 NUDCQ9Y266 331 aa16.14■□□□□ 0.17
CACNB3-213ENST00000550064 LMOD2Q6P5Q4 547 aa16.13■□□□□ 0.17
CACNB3-213ENST00000550064 CCDC146Q8IYE0 955 aa16.13■□□□□ 0.17
CACNB3-213ENST00000550064 PXDNQ92626 1479 aa16.13■□□□□ 0.17
CACNB3-213ENST00000550064 ALS2Q96Q42 1657 aa16.13■□□□□ 0.17
CACNB3-213ENST00000550064 PEAK1Q9H792 1746 aa16.13■□□□□ 0.17
CACNB3-213ENST00000550064 SBNO1A3KN83 1393 aa16.13■□□□□ 0.17
CACNB3-213ENST00000550064 U2AF1L5P0DN76 240 aaPredicted RBP16.12■□□□□ 0.17
CACNB3-213ENST00000550064 U2AF1Q01081 240 aaKnown RBP eCLIP16.12■□□□□ 0.17
CACNB3-213ENST00000550064 MAP3K19Q56UN5 1328 aa16.12■□□□□ 0.17
CACNB3-213ENST00000550064 U2SURPO15042 1029 aaKnown RBP16.11■□□□□ 0.17
CACNB3-213ENST00000550064 IL13P35225 146 aa16.1■□□□□ 0.17
CACNB3-213ENST00000550064 KCNH5Q8NCM2 988 aa16.09■□□□□ 0.17
CACNB3-213ENST00000550064 SALL2Q9Y467 1007 aaPredicted RBP16.09■□□□□ 0.17
CACNB3-213ENST00000550064 USP19O94966 1318 aa16.09■□□□□ 0.17
CACNB3-213ENST00000550064 SLIT3O75094 1523 aa16.09■□□□□ 0.17
CACNB3-213ENST00000550064 NFAT5O94916 1531 aa16.09■□□□□ 0.17
CACNB3-213ENST00000550064 AMPHP49418 695 aa16.08■□□□□ 0.16
CACNB3-213ENST00000550064 HSP90AB2PQ58FF8 381 aa16.08■□□□□ 0.16
CACNB3-213ENST00000550064 RUNDC1Q96C34 613 aa16.08■□□□□ 0.16
CACNB3-213ENST00000550064 SOS2Q07890 1332 aaPredicted RBP16.08■□□□□ 0.16
CACNB3-213ENST00000550064 SPATA31A3Q5VYP0 1347 aa16.08■□□□□ 0.16
CACNB3-213ENST00000550064 TNS3Q68CZ2 1445 aa16.08■□□□□ 0.16
CACNB3-213ENST00000550064 APAF1O14727 1248 aa16.07■□□□□ 0.16
CACNB3-213ENST00000550064 PLEKHG5O94827 1062 aa16.07■□□□□ 0.16
CACNB3-213ENST00000550064 GCP02774 474 aa16.07■□□□□ 0.16
CACNB3-213ENST00000550064 EIF4A2Q14240 407 aaKnown RBP16.07■□□□□ 0.16
CACNB3-213ENST00000550064 FLT4P35916 1363 aa16.07■□□□□ 0.16
CACNB3-213ENST00000550064 NHSL1Q5SYE7 1610 aa16.07■□□□□ 0.16
CACNB3-213ENST00000550064 LTN1O94822 1766 aa16.07■□□□□ 0.16
CACNB3-213ENST00000550064 KIF24Q5T7B8 1368 aa16.06■□□□□ 0.16
CACNB3-213ENST00000550064 MED1Q15648 1581 aaPredicted RBP16.05■□□□□ 0.16
CACNB3-213ENST00000550064 HOXC9P31274 260 aa16.05■□□□□ 0.16
CACNB3-213ENST00000550064 ARHGEF10O15013 1369 aa16.04■□□□□ 0.16
CACNB3-213ENST00000550064 FCHSD2O94868 740 aa16.04■□□□□ 0.16
CACNB3-213ENST00000550064 RTL1A6NKG5 1358 aa16.03■□□□□ 0.16
CACNB3-213ENST00000550064 ROBO1Q9Y6N7 1651 aa16.03■□□□□ 0.16
CACNB3-213ENST00000550064 ARHGEF25Q86VW2 580 aa16.03■□□□□ 0.16
CACNB3-213ENST00000550064 TCP11L2Q8N4U5 519 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms