RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 EIF3AQ14152 1382 aaKnown RBP14.53□□□□□ -0.08
TRAFD1-207ENST00000550051 WASLO00401 505 aaPredicted RBP14.53□□□□□ -0.08
TRAFD1-207ENST00000550051 PRR36Q9H6K5 1346 aa14.52□□□□□ -0.08
TRAFD1-207ENST00000550051 FAM98CQ17RN3 349 aaKnown RBP14.52□□□□□ -0.09
TRAFD1-207ENST00000550051 COL14A1Q05707 1796 aaKnown RBP14.52□□□□□ -0.09
TRAFD1-207ENST00000550051 NRAPQ86VF7 1730 aa14.52□□□□□ -0.09
TRAFD1-207ENST00000550051 BAG6P46379 1132 aa14.51□□□□□ -0.09
TRAFD1-207ENST00000550051 HIRIP3Q9BW71 556 aaPredicted RBP14.51□□□□□ -0.09
TRAFD1-207ENST00000550051 SPATA31A5Q5VU36 1347 aa14.5□□□□□ -0.09
TRAFD1-207ENST00000550051 SPATA31A7Q8IWB4 1347 aa14.5□□□□□ -0.09
TRAFD1-207ENST00000550051 MINK1Q8N4C8 1332 aaPredicted RBP14.5□□□□□ -0.09
TRAFD1-207ENST00000550051 DCAF11Q8TEB1 546 aa14.5□□□□□ -0.09
TRAFD1-207ENST00000550051 NGDNQ8NEJ9 315 aaKnown RBP14.49□□□□□ -0.09
TRAFD1-207ENST00000550051 KDM2AQ9Y2K7 1162 aa14.49□□□□□ -0.09
TRAFD1-207ENST00000550051 TULP4Q9NRJ4 1543 aa14.49□□□□□ -0.09
TRAFD1-207ENST00000550051 LRP5O75197 1615 aa14.48□□□□□ -0.09
TRAFD1-207ENST00000550051 RAB3GAP2Q9H2M9 1393 aa14.48□□□□□ -0.09
TRAFD1-207ENST00000550051 A0A0G2JS52 829 aa14.48□□□□□ -0.09
TRAFD1-207ENST00000550051 MYT1Q01538 1121 aa14.48□□□□□ -0.09
TRAFD1-207ENST00000550051 PAK3O75914 559 aaPredicted RBP14.47□□□□□ -0.09
TRAFD1-207ENST00000550051 HRCP23327 699 aa14.47□□□□□ -0.09
TRAFD1-207ENST00000550051 CRYBG1Q9Y4K1 1723 aa14.46□□□□□ -0.09
TRAFD1-207ENST00000550051 NUDT16Q96DE0 195 aaKnown RBP14.46□□□□□ -0.09
TRAFD1-207ENST00000550051 PRDM11Q9NQV5 511 aa14.46□□□□□ -0.09
TRAFD1-207ENST00000550051 RGPD1P0DJD0 1748 aa14.45□□□□□ -0.1
TRAFD1-207ENST00000550051 EN1Q05925 392 aaPredicted RBP14.45□□□□□ -0.1
TRAFD1-207ENST00000550051 SPATA31A1Q5TZJ5 1347 aa14.44□□□□□ -0.1
TRAFD1-207ENST00000550051 DISP2A7MBM2 1401 aa14.44□□□□□ -0.1
TRAFD1-207ENST00000550051 PSDA5PKW4 1024 aaPredicted RBP14.44□□□□□ -0.1
TRAFD1-207ENST00000550051 THSD7AQ9UPZ6 1657 aa14.44□□□□□ -0.1
TRAFD1-207ENST00000550051 FAM182BQ5T319 152 aa14.43□□□□□ -0.1
TRAFD1-207ENST00000550051 FAM196AQ6ZSG2 479 aa14.43□□□□□ -0.1
TRAFD1-207ENST00000550051 ITSN1Q15811 1721 aa14.43□□□□□ -0.1
TRAFD1-207ENST00000550051 ZBTB22O15209 634 aa14.42□□□□□ -0.1
TRAFD1-207ENST00000550051 NBPF8Q3BBV2 869 aa14.42□□□□□ -0.1
TRAFD1-207ENST00000550051 CDK19Q9BWU1 502 aa14.42□□□□□ -0.1
TRAFD1-207ENST00000550051 CCDC61Q9Y6R9 512 aa14.42□□□□□ -0.1
TRAFD1-207ENST00000550051 KIAA0232Q92628 1395 aa14.42□□□□□ -0.1
TRAFD1-207ENST00000550051 ARHGEF28Q8N1W1 1705 aaKnown RBP14.41□□□□□ -0.1
TRAFD1-207ENST00000550051 PLEKHG3A1L390 1219 aa14.41□□□□□ -0.1
TRAFD1-207ENST00000550051 CAMKK2Q96RR4 588 aa14.41□□□□□ -0.1
TRAFD1-207ENST00000550051 POLR3AO14802 1390 aaPredicted RBP14.41□□□□□ -0.1
TRAFD1-207ENST00000550051 ATP7BP35670 1465 aa14.41□□□□□ -0.1
TRAFD1-207ENST00000550051 ZC3H6P61129 1189 aaKnown RBP14.4□□□□□ -0.1
TRAFD1-207ENST00000550051 CHRNA2Q15822 529 aa14.4□□□□□ -0.1
TRAFD1-207ENST00000550051 BARGINQ6ZT62 677 aa14.4□□□□□ -0.1
TRAFD1-207ENST00000550051 ACEP12821 1306 aa14.4□□□□□ -0.1
TRAFD1-207ENST00000550051 TNS1Q9HBL0 1735 aaKnown RBP14.39□□□□□ -0.11
TRAFD1-207ENST00000550051 EVA1CP58658 441 aa14.39□□□□□ -0.11
TRAFD1-207ENST00000550051 R3HDM1Q15032 1099 aaKnown RBP14.39□□□□□ -0.11
TRAFD1-207ENST00000550051 EZH2Q15910 746 aaKnown RBP14.39□□□□□ -0.11
TRAFD1-207ENST00000550051 PHRF1Q9P1Y6 1649 aaKnown RBP14.38□□□□□ -0.11
TRAFD1-207ENST00000550051 TRIM37O94972 964 aa14.38□□□□□ -0.11
TRAFD1-207ENST00000550051 STRN4Q9NRL3 753 aa14.38□□□□□ -0.11
TRAFD1-207ENST00000550051 PARD3Q8TEW0 1356 aa14.37□□□□□ -0.11
TRAFD1-207ENST00000550051 CPDO75976 1380 aa14.36□□□□□ -0.11
TRAFD1-207ENST00000550051 APBA3O96018 575 aa14.36□□□□□ -0.11
TRAFD1-207ENST00000550051 PDE3BQ13370 1112 aa14.36□□□□□ -0.11
TRAFD1-207ENST00000550051 NUTM2GQ5VZR2 741 aa14.36□□□□□ -0.11
TRAFD1-207ENST00000550051 ABTB2Q8N961 1025 aa14.36□□□□□ -0.11
TRAFD1-207ENST00000550051 THRAP3Q9Y2W1 955 aaKnown RBP14.36□□□□□ -0.11
TRAFD1-207ENST00000550051 KIAA1210Q9ULL0 1709 aa14.35□□□□□ -0.11
TRAFD1-207ENST00000550051 TOPAZ1Q8N9V7 1692 aa14.35□□□□□ -0.11
TRAFD1-207ENST00000550051 CAMTA1Q9Y6Y1 1673 aa14.35□□□□□ -0.11
TRAFD1-207ENST00000550051 SSH2Q76I76 1423 aa14.34□□□□□ -0.11
TRAFD1-207ENST00000550051 GCP02774 474 aa14.34□□□□□ -0.11
TRAFD1-207ENST00000550051 LARP1Q6PKG0 1096 aaKnown RBP14.34□□□□□ -0.11
TRAFD1-207ENST00000550051 NLRP13Q86W25 1043 aa14.34□□□□□ -0.11
TRAFD1-207ENST00000550051 TCP11L2Q8N4U5 519 aa14.34□□□□□ -0.11
TRAFD1-207ENST00000550051 USP35Q9P2H5 1018 aa14.34□□□□□ -0.11
TRAFD1-207ENST00000550051 USP19O94966 1318 aa14.34□□□□□ -0.11
TRAFD1-207ENST00000550051 C11orf95C9JLR9 678 aaPredicted RBP14.33□□□□□ -0.12
TRAFD1-207ENST00000550051 BRD4O60885 1362 aaPredicted RBP14.33□□□□□ -0.12
TRAFD1-207ENST00000550051 NBPF1Q3BBV0 1214 aa14.32□□□□□ -0.12
TRAFD1-207ENST00000550051 LMO7Q8WWI1 1683 aa14.32□□□□□ -0.12
TRAFD1-207ENST00000550051 NBPF14Q5TI25 921 aa14.31□□□□□ -0.12
TRAFD1-207ENST00000550051 NRKQ7Z2Y5 1582 aa14.3□□□□□ -0.12
TRAFD1-207ENST00000550051 SRPK2P78362 688 aaKnown RBP14.29□□□□□ -0.12
TRAFD1-207ENST00000550051 RREB1Q92766 1687 aa14.29□□□□□ -0.12
TRAFD1-207ENST00000550051 PPIP5K1Q6PFW1 1433 aa14.28□□□□□ -0.12
TRAFD1-207ENST00000550051 CENPJQ9HC77 1338 aaPredicted RBP14.28□□□□□ -0.12
TRAFD1-207ENST00000550051 PARP4Q9UKK3 1724 aaKnown RBP14.27□□□□□ -0.12
TRAFD1-207ENST00000550051 COL5A2P05997 1499 aaPredicted RBP14.27□□□□□ -0.12
TRAFD1-207ENST00000550051 CABP2Q9NPB3 220 aa14.27□□□□□ -0.13
TRAFD1-207ENST00000550051 NUP188Q5SRE5 1749 aa14.27□□□□□ -0.13
TRAFD1-207ENST00000550051 CRB1P82279 1406 aa14.26□□□□□ -0.13
TRAFD1-207ENST00000550051 AATKQ6ZMQ8 1374 aa14.26□□□□□ -0.13
TRAFD1-207ENST00000550051 PLSCR1O15162 318 aa14.26□□□□□ -0.13
TRAFD1-207ENST00000550051 NLRP6P59044 892 aa14.26□□□□□ -0.13
TRAFD1-207ENST00000550051 CABP1Q9NZU7 370 aa14.26□□□□□ -0.13
TRAFD1-207ENST00000550051 USP6P35125 1406 aa14.24□□□□□ -0.13
TRAFD1-207ENST00000550051 SPON1Q9HCB6 807 aa14.24□□□□□ -0.13
TRAFD1-207ENST00000550051 PEAK1Q9H792 1746 aa14.24□□□□□ -0.13
TRAFD1-207ENST00000550051 SBF2Q86WG5 1849 aa14.23□□□□□ -0.13
TRAFD1-207ENST00000550051 KCNQ2O43526 872 aa14.23□□□□□ -0.13
TRAFD1-207ENST00000550051 ZNF692Q9BU19 519 aaPredicted RBP14.23□□□□□ -0.13
TRAFD1-207ENST00000550051 COL18A1P39060 1754 aa14.22□□□□□ -0.13
TRAFD1-207ENST00000550051 SLIT3O75094 1523 aa14.22□□□□□ -0.13
TRAFD1-207ENST00000550051 DDB1Q16531 1140 aa14.22□□□□□ -0.13
TRAFD1-207ENST00000550051 BCL11BQ9C0K0 894 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms