RNA–Protein interactions for RNA: ENST00000549770.1

NPAS3-207, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-207ENST00000549770 SCUBE2Q9NQ36 999 aa9.36□□□□□ -0.91
NPAS3-207ENST00000549770 FAM135BQ49AJ0 1406 aa9.36□□□□□ -0.91
NPAS3-207ENST00000549770 ROBO2Q9HCK4 1378 aa9.36□□□□□ -0.91
NPAS3-207ENST00000549770 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.35□□□□□ -0.91
NPAS3-207ENST00000549770 IRX5P78411 483 aaPredicted RBP9.35□□□□□ -0.91
NPAS3-207ENST00000549770 MED1Q15648 1581 aaPredicted RBP9.35□□□□□ -0.91
NPAS3-207ENST00000549770 TMEM132EQ6IEE7 984 aa9.35□□□□□ -0.91
NPAS3-207ENST00000549770 ZFP91Q96JP5 570 aaPredicted RBP9.35□□□□□ -0.91
NPAS3-207ENST00000549770 C19orf44Q9H6X5 657 aa9.35□□□□□ -0.91
NPAS3-207ENST00000549770 STK26Q9P289 416 aa9.35□□□□□ -0.91
NPAS3-207ENST00000549770 NCOA3Q9Y6Q9 1424 aa9.35□□□□□ -0.91
NPAS3-207ENST00000549770 PHLPP1O60346 1717 aa9.34□□□□□ -0.91
NPAS3-207ENST00000549770 RGL2O15211 777 aa9.34□□□□□ -0.91
NPAS3-207ENST00000549770 OCEL1Q9H607 264 aa9.34□□□□□ -0.91
NPAS3-207ENST00000549770 TAOK2Q9UL54 1235 aa9.34□□□□□ -0.91
NPAS3-207ENST00000549770 ASXL1Q8IXJ9 1541 aa9.34□□□□□ -0.91
NPAS3-207ENST00000549770 PIK3C2GO75747 1445 aa9.33□□□□□ -0.92
NPAS3-207ENST00000549770 ADGRL3Q9HAR2 1447 aa9.33□□□□□ -0.92
NPAS3-207ENST00000549770 CADPS2Q86UW7 1296 aa9.33□□□□□ -0.92
NPAS3-207ENST00000549770 KDM2AQ9Y2K7 1162 aa9.33□□□□□ -0.92
NPAS3-207ENST00000549770 PTCH1Q13635 1447 aa9.32□□□□□ -0.92
NPAS3-207ENST00000549770 ILDR2Q71H61 639 aa9.32□□□□□ -0.92
NPAS3-207ENST00000549770 CFAP70Q5T0N1 1121 aa9.31□□□□□ -0.92
NPAS3-207ENST00000549770 WAPLQ7Z5K2 1190 aa9.31□□□□□ -0.92
NPAS3-207ENST00000549770 DCAF11Q8TEB1 546 aa9.31□□□□□ -0.92
NPAS3-207ENST00000549770 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.31□□□□□ -0.92
NPAS3-207ENST00000549770 MYOM2P54296 1465 aa9.31□□□□□ -0.92
NPAS3-207ENST00000549770 COL16A1Q07092 1604 aaPredicted RBP9.31□□□□□ -0.92
NPAS3-207ENST00000549770 DCCP43146 1447 aa9.31□□□□□ -0.92
NPAS3-207ENST00000549770 MST1RQ04912 1400 aa9.31□□□□□ -0.92
NPAS3-207ENST00000549770 NRXN1Q9ULB1 1477 aa9.3□□□□□ -0.92
NPAS3-207ENST00000549770 PLEKHH1Q9ULM0 1364 aa9.3□□□□□ -0.92
NPAS3-207ENST00000549770 BRINP3Q76B58 766 aa9.3□□□□□ -0.92
NPAS3-207ENST00000549770 DDX17Q92841 729 aaKnown RBP9.3□□□□□ -0.92
NPAS3-207ENST00000549770 KNDC1Q76NI1 1749 aa9.3□□□□□ -0.92
NPAS3-207ENST00000549770 YTHDC2Q9H6S0 1430 aaKnown RBP9.3□□□□□ -0.92
NPAS3-207ENST00000549770 LRPPRCP42704 1394 aaKnown RBP9.29□□□□□ -0.92
NPAS3-207ENST00000549770 EFCAB3Q8N7B9 438 aa9.29□□□□□ -0.92
NPAS3-207ENST00000549770 C14orf93Q9H972 538 aaKnown RBP9.29□□□□□ -0.92
NPAS3-207ENST00000549770 LAMC1P11047 1609 aa9.29□□□□□ -0.92
NPAS3-207ENST00000549770 AHDC1Q5TGY3 1603 aaPredicted RBP9.28□□□□□ -0.92
NPAS3-207ENST00000549770 DHX57Q6P158 1386 aaKnown RBP9.28□□□□□ -0.92
NPAS3-207ENST00000549770 NUTM2FA1L443 756 aa9.28□□□□□ -0.92
NPAS3-207ENST00000549770 SAFB2Q14151 953 aaKnown RBP eCLIP9.28□□□□□ -0.92
NPAS3-207ENST00000549770 BCL11BQ9C0K0 894 aaPredicted RBP9.28□□□□□ -0.92
NPAS3-207ENST00000549770 TECPR2O15040 1411 aa9.28□□□□□ -0.92
NPAS3-207ENST00000549770 PRAG1Q86YV5 1406 aa9.28□□□□□ -0.92
NPAS3-207ENST00000549770 C1orf167Q5SNV9 1468 aa9.28□□□□□ -0.92
NPAS3-207ENST00000549770 NHSL1Q5SYE7 1610 aa9.27□□□□□ -0.92
NPAS3-207ENST00000549770 ABCC11Q96J66 1382 aa9.27□□□□□ -0.93
NPAS3-207ENST00000549770 STK25O00506 426 aa9.27□□□□□ -0.93
NPAS3-207ENST00000549770 PDCD7Q8N8D1 485 aaKnown RBP9.27□□□□□ -0.93
NPAS3-207ENST00000549770 ORAI2Q96SN7 254 aa9.27□□□□□ -0.93
NPAS3-207ENST00000549770 STK24Q9Y6E0 443 aa9.27□□□□□ -0.93
NPAS3-207ENST00000549770 LCE2DQ5TA82 110 aaPredicted RBP9.26□□□□□ -0.93
NPAS3-207ENST00000549770 SIN3AQ96ST3 1273 aa9.26□□□□□ -0.93
NPAS3-207ENST00000549770 JCADQ9P266 1359 aa9.25□□□□□ -0.93
NPAS3-207ENST00000549770 ADGRB1O14514 1584 aa9.25□□□□□ -0.93
NPAS3-207ENST00000549770 CDC42BPGQ6DT37 1551 aa9.25□□□□□ -0.93
NPAS3-207ENST00000549770 TRIM26Q12899 539 aaPredicted RBP9.25□□□□□ -0.93
NPAS3-207ENST00000549770 NEUROD1Q13562 356 aa9.25□□□□□ -0.93
NPAS3-207ENST00000549770 PRAM1Q96QH2 718 aa9.25□□□□□ -0.93
NPAS3-207ENST00000549770 TRAK1Q9UPV9 953 aa9.25□□□□□ -0.93
NPAS3-207ENST00000549770 SHPRHQ149N8 1683 aa9.24□□□□□ -0.93
NPAS3-207ENST00000549770 NUTM2BA6NNL0 878 aaPredicted RBP9.24□□□□□ -0.93
NPAS3-207ENST00000549770 NUTM2EB1AL46 878 aaPredicted RBP9.24□□□□□ -0.93
NPAS3-207ENST00000549770 ESCO1Q5FWF5 840 aa9.24□□□□□ -0.93
NPAS3-207ENST00000549770 NUTM2AQ8IVF1 878 aaPredicted RBP9.24□□□□□ -0.93
NPAS3-207ENST00000549770 POGKQ9P215 609 aa9.24□□□□□ -0.93
NPAS3-207ENST00000549770 FMN2Q9NZ56 1722 aa9.24□□□□□ -0.93
NPAS3-207ENST00000549770 LRP6O75581 1613 aa9.23□□□□□ -0.93
NPAS3-207ENST00000549770 RGPD8O14715 1765 aaPredicted RBP9.23□□□□□ -0.93
NPAS3-207ENST00000549770 XPCQ01831 940 aaPredicted RBP9.23□□□□□ -0.93
NPAS3-207ENST00000549770 HIRIP3Q9BW71 556 aaPredicted RBP9.23□□□□□ -0.93
NPAS3-207ENST00000549770 MEX3CQ5U5Q3 659 aaKnown RBP9.22□□□□□ -0.93
NPAS3-207ENST00000549770 DPY19L2Q6NUT2 758 aa9.22□□□□□ -0.93
NPAS3-207ENST00000549770 RGS17Q9UGC6 210 aaPredicted RBP9.22□□□□□ -0.93
NPAS3-207ENST00000549770 MINK1Q8N4C8 1332 aaPredicted RBP9.22□□□□□ -0.93
NPAS3-207ENST00000549770 DLC1Q96QB1 1528 aa9.21□□□□□ -0.93
NPAS3-207ENST00000549770 L3MBTL2Q969R5 705 aa9.21□□□□□ -0.94
NPAS3-207ENST00000549770 L3MBTL3Q96JM7 780 aaPredicted RBP9.21□□□□□ -0.94
NPAS3-207ENST00000549770 ARHGEF28Q8N1W1 1705 aaKnown RBP9.21□□□□□ -0.94
NPAS3-207ENST00000549770 SOX12O15370 315 aa9.2□□□□□ -0.94
NPAS3-207ENST00000549770 FOXO3O43524 673 aa9.2□□□□□ -0.94
NPAS3-207ENST00000549770 NBPF1Q3BBV0 1214 aa9.2□□□□□ -0.94
NPAS3-207ENST00000549770 LRRC59Q96AG4 307 aaKnown RBP9.2□□□□□ -0.94
NPAS3-207ENST00000549770 SIRT1Q96EB6 747 aa9.2□□□□□ -0.94
NPAS3-207ENST00000549770 STAC3Q96MF2 364 aa9.2□□□□□ -0.94
NPAS3-207ENST00000549770 SPATA31A6Q5VVP1 1343 aa9.2□□□□□ -0.94
NPAS3-207ENST00000549770 PNPLA6Q8IY17 1366 aa9.2□□□□□ -0.94
NPAS3-207ENST00000549770 KIAA1210Q9ULL0 1709 aa9.19□□□□□ -0.94
NPAS3-207ENST00000549770 POTEAQ6S8J7 498 aa9.19□□□□□ -0.94
NPAS3-207ENST00000549770 PHF8Q9UPP1 1060 aa9.19□□□□□ -0.94
NPAS3-207ENST00000549770 SOS2Q07890 1332 aaPredicted RBP9.19□□□□□ -0.94
NPAS3-207ENST00000549770 USP32Q8NFA0 1604 aa9.19□□□□□ -0.94
NPAS3-207ENST00000549770 G3V3G9 751 aa9.18□□□□□ -0.94
NPAS3-207ENST00000549770 ADGRB2O60241 1585 aa9.18□□□□□ -0.94
NPAS3-207ENST00000549770 KIF1AQ12756 1690 aa9.18□□□□□ -0.94
NPAS3-207ENST00000549770 NPHP3Q7Z494 1330 aa9.18□□□□□ -0.94
NPAS3-207ENST00000549770 PXDNQ92626 1479 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms