RNA–Protein interactions for RNA: ENST00000549554.1

TUBA1C-205, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-205ENST00000549554 PLEKHG5O94827 1062 aa28.11■■■□□ 2.09
TUBA1C-205ENST00000549554 CABLES1Q8TDN4 633 aa28.11■■■□□ 2.09
TUBA1C-205ENST00000549554 QTRT2Q9H974 415 aaKnown RBP28.11■■■□□ 2.09
TUBA1C-205ENST00000549554 CRYBG1Q9Y4K1 1723 aa28.11■■■□□ 2.09
TUBA1C-205ENST00000549554 CDK12Q9NYV4 1490 aaPredicted RBP28.1■■■□□ 2.09
TUBA1C-205ENST00000549554 CCER1Q8TC90 406 aaPredicted RBP28.09■■■□□ 2.09
TUBA1C-205ENST00000549554 TRPC5Q9UL62 973 aaPredicted RBP28.09■■■□□ 2.09
TUBA1C-205ENST00000549554 ATAD2Q6PL18 1390 aa28.09■■■□□ 2.09
TUBA1C-205ENST00000549554 PLCH1Q4KWH8 1693 aa28.08■■■□□ 2.09
TUBA1C-205ENST00000549554 NWD2Q9ULI1 1742 aa28.08■■■□□ 2.09
TUBA1C-205ENST00000549554 BRD4O60885 1362 aaPredicted RBP28.08■■■□□ 2.09
TUBA1C-205ENST00000549554 RBM6P78332 1123 aaKnown RBP28.07■■■□□ 2.08
TUBA1C-205ENST00000549554 CABP1Q9NZU7 370 aa28.06■■■□□ 2.08
TUBA1C-205ENST00000549554 PHRF1Q9P1Y6 1649 aaKnown RBP28.06■■■□□ 2.08
TUBA1C-205ENST00000549554 SLIT2O94813 1529 aa28.05■■■□□ 2.08
TUBA1C-205ENST00000549554 AKAP12Q02952 1782 aa28.04■■■□□ 2.08
TUBA1C-205ENST00000549554 BCL9LQ86UU0 1499 aa28.04■■■□□ 2.08
TUBA1C-205ENST00000549554 ATRNO75882 1429 aa28.04■■■□□ 2.08
TUBA1C-205ENST00000549554 COL14A1Q05707 1796 aaKnown RBP28.02■■■□□ 2.08
TUBA1C-205ENST00000549554 USP6P35125 1406 aa28.01■■■□□ 2.08
TUBA1C-205ENST00000549554 SLC24A1O60721 1099 aa28.01■■■□□ 2.07
TUBA1C-205ENST00000549554 UNC5CLQ8IV45 518 aa28■■■□□ 2.07
TUBA1C-205ENST00000549554 ABTB2Q8N961 1025 aa27.99■■■□□ 2.07
TUBA1C-205ENST00000549554 ZNF692Q9BU19 519 aaPredicted RBP27.97■■■□□ 2.07
TUBA1C-205ENST00000549554 RGS12O14924 1447 aa27.97■■■□□ 2.07
TUBA1C-205ENST00000549554 ST20-MTHFSA0A0A6YYL1 179 aa27.96■■■□□ 2.07
TUBA1C-205ENST00000549554 USP47Q96K76 1375 aa27.96■■■□□ 2.07
TUBA1C-205ENST00000549554 MON2Q7Z3U7 1717 aa27.95■■■□□ 2.07
TUBA1C-205ENST00000549554 NRAPQ86VF7 1730 aa27.95■■■□□ 2.07
TUBA1C-205ENST00000549554 NUTM2GQ5VZR2 741 aa27.95■■■□□ 2.06
TUBA1C-205ENST00000549554 NLRP13Q86W25 1043 aa27.94■■■□□ 2.06
TUBA1C-205ENST00000549554 NRKQ7Z2Y5 1582 aa27.94■■■□□ 2.06
TUBA1C-205ENST00000549554 FAM83GA6ND36 823 aa27.93■■■□□ 2.06
TUBA1C-205ENST00000549554 PUS7Q96PZ0 661 aaKnown RBP27.93■■■□□ 2.06
TUBA1C-205ENST00000549554 GJD4Q96KN9 370 aaPredicted RBP27.92■■■□□ 2.06
TUBA1C-205ENST00000549554 PRDM11Q9NQV5 511 aa27.92■■■□□ 2.06
TUBA1C-205ENST00000549554 CPSF1Q10570 1443 aaKnown RBP27.92■■■□□ 2.06
TUBA1C-205ENST00000549554 PIK3C2AO00443 1686 aa27.91■■■□□ 2.06
TUBA1C-205ENST00000549554 TESK2Q96S53 571 aa27.91■■■□□ 2.06
TUBA1C-205ENST00000549554 SSH2Q76I76 1423 aa27.91■■■□□ 2.06
TUBA1C-205ENST00000549554 USP19O94966 1318 aa27.91■■■□□ 2.06
TUBA1C-205ENST00000549554 KTN1Q86UP2 1357 aaKnown RBP27.9■■■□□ 2.06
TUBA1C-205ENST00000549554 GLI3P10071 1580 aa27.9■■■□□ 2.06
TUBA1C-205ENST00000549554 VPS72Q15906 364 aa27.89■■■□□ 2.06
TUBA1C-205ENST00000549554 TMC1Q8TDI8 760 aa27.89■■■□□ 2.06
TUBA1C-205ENST00000549554 KIAA0232Q92628 1395 aa27.88■■■□□ 2.05
TUBA1C-205ENST00000549554 BTG4Q9NY30 223 aa27.88■■■□□ 2.05
TUBA1C-205ENST00000549554 TTC21AQ8NDW8 1320 aa27.88■■■□□ 2.05
TUBA1C-205ENST00000549554 NLRP6P59044 892 aa27.87■■■□□ 2.05
TUBA1C-205ENST00000549554 CCDC9Q9Y3X0 531 aaKnown RBP27.87■■■□□ 2.05
TUBA1C-205ENST00000549554 NINLQ9Y2I6 1382 aa27.86■■■□□ 2.05
TUBA1C-205ENST00000549554 HDGFL2Q7Z4V5 671 aaPredicted RBP27.86■■■□□ 2.05
TUBA1C-205ENST00000549554 TTC21BQ7Z4L5 1316 aa27.86■■■□□ 2.05
TUBA1C-205ENST00000549554 ZC3H6P61129 1189 aaKnown RBP27.85■■■□□ 2.05
TUBA1C-205ENST00000549554 TMF1P82094 1093 aa27.85■■■□□ 2.05
TUBA1C-205ENST00000549554 SLIT3O75094 1523 aa27.85■■■□□ 2.05
TUBA1C-205ENST00000549554 TERF2IPQ9NYB0 399 aa27.84■■■□□ 2.05
TUBA1C-205ENST00000549554 CPDO75976 1380 aa27.84■■■□□ 2.05
TUBA1C-205ENST00000549554 CD163L1Q9NR16 1453 aa27.83■■■□□ 2.04
TUBA1C-205ENST00000549554 GCP02774 474 aa27.82■■■□□ 2.04
TUBA1C-205ENST00000549554 CHRNA2Q15822 529 aa27.81■■■□□ 2.04
TUBA1C-205ENST00000549554 SLC12A5Q9H2X9 1139 aa27.81■■■□□ 2.04
TUBA1C-205ENST00000549554 CDCA8Q53HL2 280 aa27.8■■■□□ 2.04
TUBA1C-205ENST00000549554 LMO7Q8WWI1 1683 aa27.79■■■□□ 2.04
TUBA1C-205ENST00000549554 EDC4Q6P2E9 1401 aaKnown RBP27.79■■■□□ 2.04
TUBA1C-205ENST00000549554 USP54Q70EL1 1684 aa27.78■■■□□ 2.04
TUBA1C-205ENST00000549554 A0A1W2PP64 1363 aa27.77■■■□□ 2.04
TUBA1C-205ENST00000549554 BRWD3Q6RI45 1802 aa27.77■■■□□ 2.04
TUBA1C-205ENST00000549554 KCNH5Q8NCM2 988 aa27.76■■■□□ 2.03
TUBA1C-205ENST00000549554 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.75■■■□□ 2.03
TUBA1C-205ENST00000549554 UPF1Q92900 1129 aaKnown RBP eCLIP27.75■■■□□ 2.03
TUBA1C-205ENST00000549554 SPATA31A5Q5VU36 1347 aa27.73■■■□□ 2.03
TUBA1C-205ENST00000549554 SPATA31A7Q8IWB4 1347 aa27.73■■■□□ 2.03
TUBA1C-205ENST00000549554 CAMTA1Q9Y6Y1 1673 aa27.73■■■□□ 2.03
TUBA1C-205ENST00000549554 EVA1CP58658 441 aa27.73■■■□□ 2.03
TUBA1C-205ENST00000549554 STRN4Q9NRL3 753 aa27.73■■■□□ 2.03
TUBA1C-205ENST00000549554 USP31Q70CQ4 1352 aa27.72■■■□□ 2.03
TUBA1C-205ENST00000549554 A0A0G2JS52 829 aa27.71■■■□□ 2.03
TUBA1C-205ENST00000549554 ZBTB7CA1YPR0 619 aa27.71■■■□□ 2.03
TUBA1C-205ENST00000549554 MYT1Q01538 1121 aa27.71■■■□□ 2.03
TUBA1C-205ENST00000549554 SEPT12Q8IYM1 358 aa27.71■■■□□ 2.03
TUBA1C-205ENST00000549554 ANKRD36BQ8N2N9 1353 aa27.71■■■□□ 2.03
TUBA1C-205ENST00000549554 ONECUT3O60422 494 aaPredicted RBP27.7■■■□□ 2.02
TUBA1C-205ENST00000549554 AATKQ6ZMQ8 1374 aa27.7■■■□□ 2.02
TUBA1C-205ENST00000549554 EIF4G2P78344 907 aaKnown RBP eCLIP27.69■■■□□ 2.02
TUBA1C-205ENST00000549554 COL18A1P39060 1754 aa27.68■■■□□ 2.02
TUBA1C-205ENST00000549554 NFAT5O94916 1531 aa27.68■■■□□ 2.02
TUBA1C-205ENST00000549554 FAM98CQ17RN3 349 aaKnown RBP27.68■■■□□ 2.02
TUBA1C-205ENST00000549554 NME9Q86XW9 330 aa27.68■■■□□ 2.02
TUBA1C-205ENST00000549554 COL5A2P05997 1499 aaPredicted RBP27.68■■■□□ 2.02
TUBA1C-205ENST00000549554 MYOM1P52179 1685 aa27.67■■■□□ 2.02
TUBA1C-205ENST00000549554 SPATA31A1Q5TZJ5 1347 aa27.67■■■□□ 2.02
TUBA1C-205ENST00000549554 THSD7AQ9UPZ6 1657 aa27.66■■■□□ 2.02
TUBA1C-205ENST00000549554 SOX12O15370 315 aa27.66■■■□□ 2.02
TUBA1C-205ENST00000549554 ABCC6O95255 1503 aa27.66■■■□□ 2.02
TUBA1C-205ENST00000549554 LTN1O94822 1766 aa27.65■■■□□ 2.02
TUBA1C-205ENST00000549554 RGPD5Q99666 1765 aa27.65■■■□□ 2.02
TUBA1C-205ENST00000549554 ARHGEF25Q86VW2 580 aa27.64■■■□□ 2.02
TUBA1C-205ENST00000549554 ZRANB1Q9UGI0 708 aa27.63■■■□□ 2.01
TUBA1C-205ENST00000549554 OVOS2A0A0J9YW53 1432 aa27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms