RNA–Protein interactions for RNA: ENST00000549040.5

RFX4-208, Transcript of regulatory factor X4, humanhuman

TSL 4

Gene RFX4, Length 473 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-208ENST00000549040 HSPA2P54652 639 aa11.65□□□□□ -0.54
RFX4-208ENST00000549040 ARSIQ5FYB1 569 aa11.65□□□□□ -0.54
RFX4-208ENST00000549040 STAC3Q96MF2 364 aa11.65□□□□□ -0.54
RFX4-208ENST00000549040 CFAP44Q96MT7 982 aa11.65□□□□□ -0.54
RFX4-208ENST00000549040 RIMS2Q9UQ26 1411 aa11.65□□□□□ -0.54
RFX4-208ENST00000549040 CEP170BQ9Y4F5 1589 aaPredicted RBP11.65□□□□□ -0.54
RFX4-208ENST00000549040 NCKAP5LQ9HCH0 1330 aa11.64□□□□□ -0.55
RFX4-208ENST00000549040 UBR1Q8IWV7 1749 aa11.64□□□□□ -0.55
RFX4-208ENST00000549040 TXNDC2Q86VQ3 553 aa11.64□□□□□ -0.55
RFX4-208ENST00000549040 NEXMIFQ5QGS0 1516 aa11.64□□□□□ -0.55
RFX4-208ENST00000549040 LMTK3Q96Q04 1460 aa11.63□□□□□ -0.55
RFX4-208ENST00000549040 SLIT1O75093 1534 aa11.63□□□□□ -0.55
RFX4-208ENST00000549040 KDM5AP29375 1690 aaKnown RBP11.62□□□□□ -0.55
RFX4-208ENST00000549040 FAM205CA6NFA0 338 aa11.62□□□□□ -0.55
RFX4-208ENST00000549040 ZEB1P37275 1124 aaPredicted RBP11.62□□□□□ -0.55
RFX4-208ENST00000549040 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.62□□□□□ -0.55
RFX4-208ENST00000549040 KIF1BO60333 1816 aa11.62□□□□□ -0.55
RFX4-208ENST00000549040 NRXN1Q9ULB1 1477 aa11.62□□□□□ -0.55
RFX4-208ENST00000549040 MYO5BQ9ULV0 1848 aa11.61□□□□□ -0.55
RFX4-208ENST00000549040 CFAP70Q5T0N1 1121 aa11.61□□□□□ -0.55
RFX4-208ENST00000549040 CADPS2Q86UW7 1296 aa11.61□□□□□ -0.55
RFX4-208ENST00000549040 ANKLE2Q86XL3 938 aa11.61□□□□□ -0.55
RFX4-208ENST00000549040 CDAN1Q8IWY9 1227 aa11.61□□□□□ -0.55
RFX4-208ENST00000549040 LARP6Q9BRS8 491 aaKnown RBP11.61□□□□□ -0.55
RFX4-208ENST00000549040 C14orf93Q9H972 538 aaKnown RBP11.61□□□□□ -0.55
RFX4-208ENST00000549040 PRAG1Q86YV5 1406 aa11.6□□□□□ -0.55
RFX4-208ENST00000549040 ZNF142P52746 1687 aaPredicted RBP11.6□□□□□ -0.55
RFX4-208ENST00000549040 MYOM2P54296 1465 aa11.6□□□□□ -0.55
RFX4-208ENST00000549040 HDGFP51858 240 aaKnown RBP11.6□□□□□ -0.55
RFX4-208ENST00000549040 NBPF1Q3BBV0 1214 aa11.6□□□□□ -0.55
RFX4-208ENST00000549040 PPP1R15BQ5SWA1 713 aa11.6□□□□□ -0.55
RFX4-208ENST00000549040 PCDHGA4Q9Y5G9 962 aa11.6□□□□□ -0.55
RFX4-208ENST00000549040 PTCD2Q8WV60 388 aaKnown RBP11.59□□□□□ -0.55
RFX4-208ENST00000549040 KHSRPQ92945 711 aaKnown RBP eCLIP11.59□□□□□ -0.55
RFX4-208ENST00000549040 EID1Q9Y6B2 187 aa11.59□□□□□ -0.55
RFX4-208ENST00000549040 ERBB3P21860 1342 aa11.59□□□□□ -0.55
RFX4-208ENST00000549040 PLEKHG1Q9ULL1 1385 aa11.58□□□□□ -0.56
RFX4-208ENST00000549040 HS3ST6Q96QI5 342 aa11.58□□□□□ -0.56
RFX4-208ENST00000549040 PIK3C2GO75747 1445 aa11.58□□□□□ -0.56
RFX4-208ENST00000549040 IFT172Q9UG01 1749 aa11.57□□□□□ -0.56
RFX4-208ENST00000549040 PPLO60437 1756 aa11.57□□□□□ -0.56
RFX4-208ENST00000549040 POTEB3A0JP26 581 aa11.57□□□□□ -0.56
RFX4-208ENST00000549040 POTEBQ6S5H4 581 aa11.57□□□□□ -0.56
RFX4-208ENST00000549040 DDX27Q96GQ7 796 aaKnown RBP11.57□□□□□ -0.56
RFX4-208ENST00000549040 ADAMTS13Q76LX8 1427 aa11.57□□□□□ -0.56
RFX4-208ENST00000549040 MED14O60244 1454 aa11.57□□□□□ -0.56
RFX4-208ENST00000549040 SCAF11Q99590 1463 aaKnown RBP11.57□□□□□ -0.56
RFX4-208ENST00000549040 MFSD10Q14728 455 aa11.56□□□□□ -0.56
RFX4-208ENST00000549040 TMEM132EQ6IEE7 984 aa11.56□□□□□ -0.56
RFX4-208ENST00000549040 SLC26A8Q96RN1 970 aa11.56□□□□□ -0.56
RFX4-208ENST00000549040 TBX22Q9Y458 520 aa11.56□□□□□ -0.56
RFX4-208ENST00000549040 METP08581 1390 aa11.54□□□□□ -0.56
RFX4-208ENST00000549040 TBC1D12O60347 775 aa11.54□□□□□ -0.56
RFX4-208ENST00000549040 NUDT7P0C024 238 aa11.54□□□□□ -0.56
RFX4-208ENST00000549040 NPHP4O75161 1426 aaPredicted RBP11.53□□□□□ -0.56
RFX4-208ENST00000549040 SETBP1Q9Y6X0 1596 aa11.53□□□□□ -0.56
RFX4-208ENST00000549040 GPRASP1Q5JY77 1395 aa11.53□□□□□ -0.56
RFX4-208ENST00000549040 ALKQ9UM73 1620 aa11.53□□□□□ -0.56
RFX4-208ENST00000549040 NRXN3Q9Y4C0 1643 aa11.53□□□□□ -0.56
RFX4-208ENST00000549040 VARS2Q5ST30 1063 aaKnown RBP11.52□□□□□ -0.57
RFX4-208ENST00000549040 BCANQ96GW7 911 aa11.52□□□□□ -0.57
RFX4-208ENST00000549040 RALGAPBQ86X10 1494 aa11.51□□□□□ -0.57
RFX4-208ENST00000549040 ADGRB1O14514 1584 aa11.51□□□□□ -0.57
RFX4-208ENST00000549040 ZNF316A6NFI3 1004 aaPredicted RBP11.51□□□□□ -0.57
RFX4-208ENST00000549040 OXER1Q8TDS5 423 aa11.51□□□□□ -0.57
RFX4-208ENST00000549040 PTPRUQ92729 1446 aa11.51□□□□□ -0.57
RFX4-208ENST00000549040 ASXL1Q8IXJ9 1541 aa11.5□□□□□ -0.57
RFX4-208ENST00000549040 STRCQ7RTU9 1775 aa11.5□□□□□ -0.57
RFX4-208ENST00000549040 CARD11Q9BXL7 1154 aa11.5□□□□□ -0.57
RFX4-208ENST00000549040 ROCK2O75116 1388 aaKnown RBP11.5□□□□□ -0.57
RFX4-208ENST00000549040 TRPM1Q7Z4N2 1603 aa11.49□□□□□ -0.57
RFX4-208ENST00000549040 UPF1Q92900 1129 aaKnown RBP eCLIP11.49□□□□□ -0.57
RFX4-208ENST00000549040 PLSCR2Q9NRY7 297 aa11.49□□□□□ -0.57
RFX4-208ENST00000549040 FBXO41Q8TF61 875 aa11.48□□□□□ -0.57
RFX4-208ENST00000549040 STK26Q9P289 416 aa11.48□□□□□ -0.57
RFX4-208ENST00000549040 LHX6Q9UPM6 363 aa11.48□□□□□ -0.57
RFX4-208ENST00000549040 AMOTL2Q9Y2J4 779 aa11.48□□□□□ -0.57
RFX4-208ENST00000549040 ABCC11Q96J66 1382 aa11.48□□□□□ -0.57
RFX4-208ENST00000549040 SETD1AO15047 1707 aaKnown RBP11.47□□□□□ -0.57
RFX4-208ENST00000549040 IQGAP1P46940 1657 aa11.47□□□□□ -0.57
RFX4-208ENST00000549040 YTHDC2Q9H6S0 1430 aaKnown RBP11.47□□□□□ -0.57
RFX4-208ENST00000549040 LRPPRCP42704 1394 aaKnown RBP11.47□□□□□ -0.57
RFX4-208ENST00000549040 TRAK1Q9UPV9 953 aa11.47□□□□□ -0.57
RFX4-208ENST00000549040 KIAA1210Q9ULL0 1709 aa11.46□□□□□ -0.57
RFX4-208ENST00000549040 HSPA5P11021 654 aaKnown RBP11.46□□□□□ -0.57
RFX4-208ENST00000549040 KCNA6P17658 529 aa11.46□□□□□ -0.57
RFX4-208ENST00000549040 ZNF687Q8N1G0 1237 aa11.46□□□□□ -0.57
RFX4-208ENST00000549040 SIRT1Q96EB6 747 aa11.46□□□□□ -0.57
RFX4-208ENST00000549040 HIRIP3Q9BW71 556 aaPredicted RBP11.46□□□□□ -0.57
RFX4-208ENST00000549040 PIK3R4Q99570 1358 aa11.45□□□□□ -0.58
RFX4-208ENST00000549040 ST20-MTHFSA0A0A6YYL1 179 aa11.45□□□□□ -0.58
RFX4-208ENST00000549040 WAPLQ7Z5K2 1190 aa11.45□□□□□ -0.58
RFX4-208ENST00000549040 ROBO2Q9HCK4 1378 aa11.44□□□□□ -0.58
RFX4-208ENST00000549040 EIF4G2P78344 907 aaKnown RBP eCLIP11.44□□□□□ -0.58
RFX4-208ENST00000549040 TESK2Q96S53 571 aa11.44□□□□□ -0.58
RFX4-208ENST00000549040 TECPR2O15040 1411 aa11.43□□□□□ -0.58
RFX4-208ENST00000549040 POLR1AO95602 1720 aaPredicted RBP11.43□□□□□ -0.58
RFX4-208ENST00000549040 USP47Q96K76 1375 aa11.43□□□□□ -0.58
RFX4-208ENST00000549040 PLEKHH1Q9ULM0 1364 aa11.43□□□□□ -0.58
RFX4-208ENST00000549040 DIP2AQ14689 1571 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms