RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 RGPD4Q7Z3J3 1758 aa12.75□□□□□ -0.37
TROAP-208ENST00000548817 WAPLQ7Z5K2 1190 aa12.75□□□□□ -0.37
TROAP-208ENST00000548817 SPATA31A1Q5TZJ5 1347 aa12.74□□□□□ -0.37
TROAP-208ENST00000548817 SIRT1Q96EB6 747 aa12.74□□□□□ -0.37
TROAP-208ENST00000548817 UTRNP46939 3433 aa12.74□□□□□ -0.37
TROAP-208ENST00000548817 TRPM3Q9HCF6 1732 aaPredicted RBP12.74□□□□□ -0.37
TROAP-208ENST00000548817 ALS2Q96Q42 1657 aa12.73□□□□□ -0.37
TROAP-208ENST00000548817 CEP350Q5VT06 3117 aa12.73□□□□□ -0.37
TROAP-208ENST00000548817 PLEKHH1Q9ULM0 1364 aa12.73□□□□□ -0.37
TROAP-208ENST00000548817 C11orf95C9JLR9 678 aaPredicted RBP12.73□□□□□ -0.37
TROAP-208ENST00000548817 NRKQ7Z2Y5 1582 aa12.73□□□□□ -0.37
TROAP-208ENST00000548817 ANKARQ7Z5J8 1434 aa12.72□□□□□ -0.37
TROAP-208ENST00000548817 CASZ1Q86V15 1759 aa12.72□□□□□ -0.37
TROAP-208ENST00000548817 STK26Q9P289 416 aa12.72□□□□□ -0.37
TROAP-208ENST00000548817 CRYBG1Q9Y4K1 1723 aa12.71□□□□□ -0.37
TROAP-208ENST00000548817 PLEKHG5O94827 1062 aa12.71□□□□□ -0.37
TROAP-208ENST00000548817 PDE3BQ13370 1112 aa12.7□□□□□ -0.38
TROAP-208ENST00000548817 YTHDC2Q9H6S0 1430 aaKnown RBP12.7□□□□□ -0.38
TROAP-208ENST00000548817 BARGINQ6ZT62 677 aa12.69□□□□□ -0.38
TROAP-208ENST00000548817 PRDM11Q9NQV5 511 aa12.69□□□□□ -0.38
TROAP-208ENST00000548817 MYOM1P52179 1685 aa12.69□□□□□ -0.38
TROAP-208ENST00000548817 GPRASP1Q5JY77 1395 aa12.69□□□□□ -0.38
TROAP-208ENST00000548817 ANKRD30BQ9BXX2 1392 aa12.69□□□□□ -0.38
TROAP-208ENST00000548817 SLC4A1APQ9BWU0 796 aaKnown RBP12.68□□□□□ -0.38
TROAP-208ENST00000548817 ADGRF5Q8IZF2 1346 aa12.67□□□□□ -0.38
TROAP-208ENST00000548817 PIK3C2GO75747 1445 aa12.66□□□□□ -0.38
TROAP-208ENST00000548817 PLSCR1O15162 318 aa12.66□□□□□ -0.38
TROAP-208ENST00000548817 GIGYF1O75420 1035 aaPredicted RBP12.66□□□□□ -0.38
TROAP-208ENST00000548817 DLC1Q96QB1 1528 aa12.66□□□□□ -0.38
TROAP-208ENST00000548817 EIF3AQ14152 1382 aaKnown RBP12.66□□□□□ -0.38
TROAP-208ENST00000548817 PTGER2P43116 358 aa12.65□□□□□ -0.38
TROAP-208ENST00000548817 TMEM132EQ6IEE7 984 aa12.64□□□□□ -0.39
TROAP-208ENST00000548817 SYT17Q9BSW7 474 aa12.64□□□□□ -0.39
TROAP-208ENST00000548817 PARP4Q9UKK3 1724 aaKnown RBP12.64□□□□□ -0.39
TROAP-208ENST00000548817 KIAA0232Q92628 1395 aa12.64□□□□□ -0.39
TROAP-208ENST00000548817 MAP3K5Q99683 1374 aa12.64□□□□□ -0.39
TROAP-208ENST00000548817 ACIN1Q9UKV3 1341 aaKnown RBP12.63□□□□□ -0.39
TROAP-208ENST00000548817 SSH2Q76I76 1423 aa12.63□□□□□ -0.39
TROAP-208ENST00000548817 PMFBP1Q8TBY8 1022 aa12.63□□□□□ -0.39
TROAP-208ENST00000548817 DHX57Q6P158 1386 aaKnown RBP12.63□□□□□ -0.39
TROAP-208ENST00000548817 OVOS2A0A0G2JMS6 1433 aa12.62□□□□□ -0.39
TROAP-208ENST00000548817 OVOS2A0A0J9YW53 1432 aa12.62□□□□□ -0.39
TROAP-208ENST00000548817 OVOS2Q6IE36 1432 aa12.62□□□□□ -0.39
TROAP-208ENST00000548817 PHRF1Q9P1Y6 1649 aaKnown RBP12.62□□□□□ -0.39
TROAP-208ENST00000548817 FHDC1Q9C0D6 1143 aaPredicted RBP12.62□□□□□ -0.39
TROAP-208ENST00000548817 ANO8Q9HCE9 1232 aaPredicted RBP12.62□□□□□ -0.39
TROAP-208ENST00000548817 THRAP3Q9Y2W1 955 aaKnown RBP12.62□□□□□ -0.39
TROAP-208ENST00000548817 SPATA31E1Q6ZUB1 1445 aa12.62□□□□□ -0.39
TROAP-208ENST00000548817 TCP11L2Q8N4U5 519 aa12.61□□□□□ -0.39
TROAP-208ENST00000548817 STRN4Q9NRL3 753 aa12.61□□□□□ -0.39
TROAP-208ENST00000548817 PEAK1Q9H792 1746 aa12.61□□□□□ -0.39
TROAP-208ENST00000548817 ZBTB7AO95365 584 aa12.6□□□□□ -0.39
TROAP-208ENST00000548817 MTFR1LQ9H019 292 aa12.6□□□□□ -0.39
TROAP-208ENST00000548817 SBF2Q86WG5 1849 aa12.6□□□□□ -0.39
TROAP-208ENST00000548817 ATP7BP35670 1465 aa12.59□□□□□ -0.39
TROAP-208ENST00000548817 TULP4Q9NRJ4 1543 aa12.59□□□□□ -0.39
TROAP-208ENST00000548817 EVA1CP58658 441 aa12.59□□□□□ -0.39
TROAP-208ENST00000548817 RGL3Q3MIN7 710 aa12.59□□□□□ -0.39
TROAP-208ENST00000548817 USP35Q9P2H5 1018 aa12.59□□□□□ -0.39
TROAP-208ENST00000548817 CHRNA2Q15822 529 aa12.58□□□□□ -0.4
TROAP-208ENST00000548817 PRAM1Q96QH2 718 aa12.58□□□□□ -0.4
TROAP-208ENST00000548817 SGIP1Q9BQI5 828 aa12.58□□□□□ -0.4
TROAP-208ENST00000548817 BCL11BQ9C0K0 894 aaPredicted RBP12.58□□□□□ -0.4
TROAP-208ENST00000548817 C14orf93Q9H972 538 aaKnown RBP12.58□□□□□ -0.4
TROAP-208ENST00000548817 LMO7Q8WWI1 1683 aa12.57□□□□□ -0.4
TROAP-208ENST00000548817 PDGFDQ9GZP0 370 aaPredicted RBP12.57□□□□□ -0.4
TROAP-208ENST00000548817 ATF5Q9Y2D1 282 aaPredicted RBP12.57□□□□□ -0.4
TROAP-208ENST00000548817 BCL9O00512 1426 aa12.56□□□□□ -0.4
TROAP-208ENST00000548817 PAK3O75914 559 aaPredicted RBP12.56□□□□□ -0.4
TROAP-208ENST00000548817 NGDNQ8NEJ9 315 aaKnown RBP12.56□□□□□ -0.4
TROAP-208ENST00000548817 STK32BQ9NY57 414 aa12.56□□□□□ -0.4
TROAP-208ENST00000548817 ITSN1Q15811 1721 aa12.56□□□□□ -0.4
TROAP-208ENST00000548817 SHANK3Q9BYB0 1731 aa12.56□□□□□ -0.4
TROAP-208ENST00000548817 CPDO75976 1380 aa12.56□□□□□ -0.4
TROAP-208ENST00000548817 LARP1Q6PKG0 1096 aaKnown RBP12.55□□□□□ -0.4
TROAP-208ENST00000548817 ARXQ96QS3 562 aa12.55□□□□□ -0.4
TROAP-208ENST00000548817 POGKQ9P215 609 aa12.55□□□□□ -0.4
TROAP-208ENST00000548817 AATKQ6ZMQ8 1374 aa12.55□□□□□ -0.4
TROAP-208ENST00000548817 ZC3H6P61129 1189 aaKnown RBP12.54□□□□□ -0.4
TROAP-208ENST00000548817 SLC15A2Q16348 729 aa12.54□□□□□ -0.4
TROAP-208ENST00000548817 MPHOSPH9Q99550 1183 aa12.54□□□□□ -0.4
TROAP-208ENST00000548817 PRR36Q9H6K5 1346 aa12.54□□□□□ -0.4
TROAP-208ENST00000548817 LRRC37A3O60309 1634 aa12.54□□□□□ -0.4
TROAP-208ENST00000548817 SAFB2Q14151 953 aaKnown RBP eCLIP12.53□□□□□ -0.4
TROAP-208ENST00000548817 GPR162Q16538 588 aa12.53□□□□□ -0.4
TROAP-208ENST00000548817 PROM2Q8N271 834 aa12.53□□□□□ -0.4
TROAP-208ENST00000548817 CRB1P82279 1406 aa12.52□□□□□ -0.41
TROAP-208ENST00000548817 COL5A2P05997 1499 aaPredicted RBP12.52□□□□□ -0.41
TROAP-208ENST00000548817 TXNRD1Q16881 649 aa12.51□□□□□ -0.41
TROAP-208ENST00000548817 WASLO00401 505 aaPredicted RBP12.5□□□□□ -0.41
TROAP-208ENST00000548817 DDB1Q16531 1140 aa12.5□□□□□ -0.41
TROAP-208ENST00000548817 GOLGB1Q14789 3259 aaKnown RBP12.5□□□□□ -0.41
TROAP-208ENST00000548817 AKAP12Q02952 1782 aa12.49□□□□□ -0.41
TROAP-208ENST00000548817 USP19O94966 1318 aa12.49□□□□□ -0.41
TROAP-208ENST00000548817 HSPA6P17066 643 aa12.49□□□□□ -0.41
TROAP-208ENST00000548817 CFAP70Q5T0N1 1121 aa12.49□□□□□ -0.41
TROAP-208ENST00000548817 CDCA7Q9BWT1 371 aaPredicted RBP12.48□□□□□ -0.41
TROAP-208ENST00000548817 WNK3Q9BYP7 1800 aa12.48□□□□□ -0.41
TROAP-208ENST00000548817 ADGRB1O14514 1584 aa12.47□□□□□ -0.41
TROAP-208ENST00000548817 POLR3AO14802 1390 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms