RNA–Protein interactions for RNA: ENST00000548749.5

RBFOX1-211, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 4

Gene RBFOX1, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-211ENST00000548749 FNBP4Q8N3X1 1017 aaPredicted RBP28.19■■■□□ 2.1
RBFOX1-211ENST00000548749 CABP1Q9NZU7 370 aa28.19■■■□□ 2.1
RBFOX1-211ENST00000548749 TIMELESSQ9UNS1 1208 aa28.18■■■□□ 2.1
RBFOX1-211ENST00000548749 SBNO2Q9Y2G9 1366 aa28.18■■■□□ 2.1
RBFOX1-211ENST00000548749 NUTM2GQ5VZR2 741 aa28.14■■■□□ 2.1
RBFOX1-211ENST00000548749 TRPC5Q9UL62 973 aaPredicted RBP28.13■■■□□ 2.09
RBFOX1-211ENST00000548749 ATAD2Q6PL18 1390 aa28.12■■■□□ 2.09
RBFOX1-211ENST00000548749 RBM6P78332 1123 aaKnown RBP28.12■■■□□ 2.09
RBFOX1-211ENST00000548749 BCL9LQ86UU0 1499 aa28.12■■■□□ 2.09
RBFOX1-211ENST00000548749 CRYBG1Q9Y4K1 1723 aa28.12■■■□□ 2.09
RBFOX1-211ENST00000548749 SLIT2O94813 1529 aa28.1■■■□□ 2.09
RBFOX1-211ENST00000548749 ST20-MTHFSA0A0A6YYL1 179 aa28.1■■■□□ 2.09
RBFOX1-211ENST00000548749 ATRNO75882 1429 aa28.09■■■□□ 2.09
RBFOX1-211ENST00000548749 ABTB2Q8N961 1025 aa28.09■■■□□ 2.09
RBFOX1-211ENST00000548749 PLCH1Q4KWH8 1693 aa28.09■■■□□ 2.09
RBFOX1-211ENST00000548749 USP6P35125 1406 aa28.09■■■□□ 2.09
RBFOX1-211ENST00000548749 CDK12Q9NYV4 1490 aaPredicted RBP28.08■■■□□ 2.09
RBFOX1-211ENST00000548749 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.07■■■□□ 2.08
RBFOX1-211ENST00000548749 UNC5CLQ8IV45 518 aa28.07■■■□□ 2.08
RBFOX1-211ENST00000548749 USP47Q96K76 1375 aa28.07■■■□□ 2.08
RBFOX1-211ENST00000548749 FAM83GA6ND36 823 aa28.06■■■□□ 2.08
RBFOX1-211ENST00000548749 BRD4O60885 1362 aaPredicted RBP28.06■■■□□ 2.08
RBFOX1-211ENST00000548749 PHRF1Q9P1Y6 1649 aaKnown RBP28.06■■■□□ 2.08
RBFOX1-211ENST00000548749 AKAP12Q02952 1782 aa28.04■■■□□ 2.08
RBFOX1-211ENST00000548749 RGS12O14924 1447 aa28.04■■■□□ 2.08
RBFOX1-211ENST00000548749 TESK2Q96S53 571 aa28.04■■■□□ 2.08
RBFOX1-211ENST00000548749 NWD2Q9ULI1 1742 aa28.04■■■□□ 2.08
RBFOX1-211ENST00000548749 TMC1Q8TDI8 760 aa28.03■■■□□ 2.08
RBFOX1-211ENST00000548749 COL14A1Q05707 1796 aaKnown RBP28.02■■■□□ 2.08
RBFOX1-211ENST00000548749 ZNF692Q9BU19 519 aaPredicted RBP28.02■■■□□ 2.08
RBFOX1-211ENST00000548749 NLRP13Q86W25 1043 aa28.01■■■□□ 2.07
RBFOX1-211ENST00000548749 PRDM11Q9NQV5 511 aa28.01■■■□□ 2.07
RBFOX1-211ENST00000548749 GJD4Q96KN9 370 aaPredicted RBP28■■■□□ 2.07
RBFOX1-211ENST00000548749 ZC3H6P61129 1189 aaKnown RBP27.99■■■□□ 2.07
RBFOX1-211ENST00000548749 BTG4Q9NY30 223 aa27.99■■■□□ 2.07
RBFOX1-211ENST00000548749 CPSF1Q10570 1443 aaKnown RBP27.99■■■□□ 2.07
RBFOX1-211ENST00000548749 SSH2Q76I76 1423 aa27.99■■■□□ 2.07
RBFOX1-211ENST00000548749 KTN1Q86UP2 1357 aaKnown RBP27.99■■■□□ 2.07
RBFOX1-211ENST00000548749 KIAA0232Q92628 1395 aa27.99■■■□□ 2.07
RBFOX1-211ENST00000548749 USP19O94966 1318 aa27.98■■■□□ 2.07
RBFOX1-211ENST00000548749 SLC24A1O60721 1099 aa27.98■■■□□ 2.07
RBFOX1-211ENST00000548749 CCDC9Q9Y3X0 531 aaKnown RBP27.98■■■□□ 2.07
RBFOX1-211ENST00000548749 NRKQ7Z2Y5 1582 aa27.98■■■□□ 2.07
RBFOX1-211ENST00000548749 TTC21BQ7Z4L5 1316 aa27.97■■■□□ 2.07
RBFOX1-211ENST00000548749 NLRP6P59044 892 aa27.97■■■□□ 2.07
RBFOX1-211ENST00000548749 PIK3C2AO00443 1686 aa27.97■■■□□ 2.07
RBFOX1-211ENST00000548749 MON2Q7Z3U7 1717 aa27.96■■■□□ 2.07
RBFOX1-211ENST00000548749 PUS7Q96PZ0 661 aaKnown RBP27.96■■■□□ 2.07
RBFOX1-211ENST00000548749 SLC12A5Q9H2X9 1139 aa27.96■■■□□ 2.07
RBFOX1-211ENST00000548749 NRAPQ86VF7 1730 aa27.95■■■□□ 2.07
RBFOX1-211ENST00000548749 CHRNA2Q15822 529 aa27.95■■■□□ 2.06
RBFOX1-211ENST00000548749 VPS72Q15906 364 aa27.95■■■□□ 2.06
RBFOX1-211ENST00000548749 GLI3P10071 1580 aa27.94■■■□□ 2.06
RBFOX1-211ENST00000548749 HDGFL2Q7Z4V5 671 aaPredicted RBP27.94■■■□□ 2.06
RBFOX1-211ENST00000548749 TMF1P82094 1093 aa27.93■■■□□ 2.06
RBFOX1-211ENST00000548749 CD163L1Q9NR16 1453 aa27.93■■■□□ 2.06
RBFOX1-211ENST00000548749 TTC21AQ8NDW8 1320 aa27.92■■■□□ 2.06
RBFOX1-211ENST00000548749 GCP02774 474 aa27.92■■■□□ 2.06
RBFOX1-211ENST00000548749 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.9■■■□□ 2.06
RBFOX1-211ENST00000548749 TERF2IPQ9NYB0 399 aa27.9■■■□□ 2.06
RBFOX1-211ENST00000548749 SLIT3O75094 1523 aa27.88■■■□□ 2.05
RBFOX1-211ENST00000548749 ZBTB7CA1YPR0 619 aa27.88■■■□□ 2.05
RBFOX1-211ENST00000548749 A0A1W2PP64 1363 aa27.87■■■□□ 2.05
RBFOX1-211ENST00000548749 CPDO75976 1380 aa27.87■■■□□ 2.05
RBFOX1-211ENST00000548749 NINLQ9Y2I6 1382 aa27.87■■■□□ 2.05
RBFOX1-211ENST00000548749 STRN4Q9NRL3 753 aa27.86■■■□□ 2.05
RBFOX1-211ENST00000548749 SOX12O15370 315 aa27.84■■■□□ 2.05
RBFOX1-211ENST00000548749 EDC4Q6P2E9 1401 aaKnown RBP27.84■■■□□ 2.05
RBFOX1-211ENST00000548749 CDCA8Q53HL2 280 aa27.83■■■□□ 2.05
RBFOX1-211ENST00000548749 NME9Q86XW9 330 aa27.83■■■□□ 2.05
RBFOX1-211ENST00000548749 ZRANB1Q9UGI0 708 aa27.83■■■□□ 2.05
RBFOX1-211ENST00000548749 EVA1CP58658 441 aa27.82■■■□□ 2.04
RBFOX1-211ENST00000548749 UPF1Q92900 1129 aaKnown RBP eCLIP27.82■■■□□ 2.04
RBFOX1-211ENST00000548749 LMO7Q8WWI1 1683 aa27.81■■■□□ 2.04
RBFOX1-211ENST00000548749 A0A0G2JS52 829 aa27.81■■■□□ 2.04
RBFOX1-211ENST00000548749 MYT1Q01538 1121 aa27.81■■■□□ 2.04
RBFOX1-211ENST00000548749 SEPT12Q8IYM1 358 aa27.81■■■□□ 2.04
RBFOX1-211ENST00000548749 SPATA31A5Q5VU36 1347 aa27.81■■■□□ 2.04
RBFOX1-211ENST00000548749 SPATA31A7Q8IWB4 1347 aa27.81■■■□□ 2.04
RBFOX1-211ENST00000548749 CAMTA1Q9Y6Y1 1673 aa27.81■■■□□ 2.04
RBFOX1-211ENST00000548749 EIF4G2P78344 907 aaKnown RBP eCLIP27.8■■■□□ 2.04
RBFOX1-211ENST00000548749 KCNH5Q8NCM2 988 aa27.8■■■□□ 2.04
RBFOX1-211ENST00000548749 FAM98CQ17RN3 349 aaKnown RBP27.79■■■□□ 2.04
RBFOX1-211ENST00000548749 BRWD3Q6RI45 1802 aa27.78■■■□□ 2.04
RBFOX1-211ENST00000548749 USP31Q70CQ4 1352 aa27.77■■■□□ 2.04
RBFOX1-211ENST00000548749 ANKRD36BQ8N2N9 1353 aa27.77■■■□□ 2.04
RBFOX1-211ENST00000548749 HSPA5P11021 654 aaKnown RBP27.77■■■□□ 2.04
RBFOX1-211ENST00000548749 ONECUT3O60422 494 aaPredicted RBP27.76■■■□□ 2.03
RBFOX1-211ENST00000548749 AATKQ6ZMQ8 1374 aa27.75■■■□□ 2.03
RBFOX1-211ENST00000548749 USP54Q70EL1 1684 aa27.75■■■□□ 2.03
RBFOX1-211ENST00000548749 NFAT5O94916 1531 aa27.75■■■□□ 2.03
RBFOX1-211ENST00000548749 SPATA31A1Q5TZJ5 1347 aa27.74■■■□□ 2.03
RBFOX1-211ENST00000548749 LARP1Q6PKG0 1096 aaKnown RBP27.74■■■□□ 2.03
RBFOX1-211ENST00000548749 USP35Q9P2H5 1018 aa27.74■■■□□ 2.03
RBFOX1-211ENST00000548749 COL5A2P05997 1499 aaPredicted RBP27.73■■■□□ 2.03
RBFOX1-211ENST00000548749 ARHGEF25Q86VW2 580 aa27.73■■■□□ 2.03
RBFOX1-211ENST00000548749 POLR3GLQ9BT43 218 aa27.72■■■□□ 2.03
RBFOX1-211ENST00000548749 COL18A1P39060 1754 aa27.72■■■□□ 2.03
RBFOX1-211ENST00000548749 MYOM1P52179 1685 aa27.72■■■□□ 2.03
RBFOX1-211ENST00000548749 OVOS2A0A0J9YW53 1432 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms