RNA–Protein interactions for RNA: ENST00000548664.1

VDR-205, Transcript of vitamin D receptor, humanhuman

TSL 5

Gene VDR, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-205ENST00000548664 DISP2A7MBM2 1401 aa25.1■■□□□ 1.61
VDR-205ENST00000548664 EN1Q05925 392 aaPredicted RBP25.09■■□□□ 1.61
VDR-205ENST00000548664 SPATA31A5Q5VU36 1347 aa25.09■■□□□ 1.61
VDR-205ENST00000548664 SPATA31A7Q8IWB4 1347 aa25.09■■□□□ 1.61
VDR-205ENST00000548664 PRR36Q9H6K5 1346 aa25.09■■□□□ 1.61
VDR-205ENST00000548664 ACIN1Q9UKV3 1341 aaKnown RBP25.09■■□□□ 1.61
VDR-205ENST00000548664 FAM182BQ5T319 152 aa25.08■■□□□ 1.61
VDR-205ENST00000548664 HIRIP3Q9BW71 556 aaPredicted RBP25.08■■□□□ 1.61
VDR-205ENST00000548664 ITSN1Q15811 1721 aa25.08■■□□□ 1.61
VDR-205ENST00000548664 EIF3AQ14152 1382 aaKnown RBP25.07■■□□□ 1.6
VDR-205ENST00000548664 PHRF1Q9P1Y6 1649 aaKnown RBP25.07■■□□□ 1.6
VDR-205ENST00000548664 TRAK1Q9UPV9 953 aa25.04■■□□□ 1.6
VDR-205ENST00000548664 MINK1Q8N4C8 1332 aaPredicted RBP25.04■■□□□ 1.6
VDR-205ENST00000548664 ARHGEF28Q8N1W1 1705 aaKnown RBP25.03■■□□□ 1.6
VDR-205ENST00000548664 R3HDM1Q15032 1099 aaKnown RBP25.02■■□□□ 1.6
VDR-205ENST00000548664 WASLO00401 505 aaPredicted RBP25■■□□□ 1.59
VDR-205ENST00000548664 PRDM11Q9NQV5 511 aa25■■□□□ 1.59
VDR-205ENST00000548664 RREB1Q92766 1687 aa24.99■■□□□ 1.59
VDR-205ENST00000548664 ATP7BP35670 1465 aa24.98■■□□□ 1.59
VDR-205ENST00000548664 SPATA31A1Q5TZJ5 1347 aa24.98■■□□□ 1.59
VDR-205ENST00000548664 PAK3O75914 559 aaPredicted RBP24.98■■□□□ 1.59
VDR-205ENST00000548664 EZH2Q15910 746 aaKnown RBP24.98■■□□□ 1.59
VDR-205ENST00000548664 NGDNQ8NEJ9 315 aaKnown RBP24.98■■□□□ 1.59
VDR-205ENST00000548664 KIAA0232Q92628 1395 aa24.97■■□□□ 1.59
VDR-205ENST00000548664 NUP188Q5SRE5 1749 aa24.95■■□□□ 1.59
VDR-205ENST00000548664 TOPAZ1Q8N9V7 1692 aa24.95■■□□□ 1.58
VDR-205ENST00000548664 CAMKK2Q96RR4 588 aa24.94■■□□□ 1.58
VDR-205ENST00000548664 TRIM37O94972 964 aa24.93■■□□□ 1.58
VDR-205ENST00000548664 FAM196AQ6ZSG2 479 aa24.93■■□□□ 1.58
VDR-205ENST00000548664 CHRNA2Q15822 529 aa24.92■■□□□ 1.58
VDR-205ENST00000548664 NRKQ7Z2Y5 1582 aa24.92■■□□□ 1.58
VDR-205ENST00000548664 PARD3Q8TEW0 1356 aa24.92■■□□□ 1.58
VDR-205ENST00000548664 STRN4Q9NRL3 753 aa24.91■■□□□ 1.58
VDR-205ENST00000548664 KDM2AQ9Y2K7 1162 aa24.9■■□□□ 1.58
VDR-205ENST00000548664 LMO7Q8WWI1 1683 aa24.9■■□□□ 1.58
VDR-205ENST00000548664 RAB3GAP2Q9H2M9 1393 aa24.9■■□□□ 1.58
VDR-205ENST00000548664 DCAF11Q8TEB1 546 aa24.89■■□□□ 1.58
VDR-205ENST00000548664 SSH2Q76I76 1423 aa24.88■■□□□ 1.57
VDR-205ENST00000548664 NUDT16Q96DE0 195 aaKnown RBP24.88■■□□□ 1.57
VDR-205ENST00000548664 APBA3O96018 575 aa24.87■■□□□ 1.57
VDR-205ENST00000548664 ZC3H6P61129 1189 aaKnown RBP24.87■■□□□ 1.57
VDR-205ENST00000548664 CAMTA1Q9Y6Y1 1673 aa24.87■■□□□ 1.57
VDR-205ENST00000548664 POLR3AO14802 1390 aaPredicted RBP24.86■■□□□ 1.57
VDR-205ENST00000548664 BARGINQ6ZT62 677 aa24.86■■□□□ 1.57
VDR-205ENST00000548664 USP35Q9P2H5 1018 aa24.85■■□□□ 1.57
VDR-205ENST00000548664 PARP4Q9UKK3 1724 aaKnown RBP24.84■■□□□ 1.57
VDR-205ENST00000548664 NUTM2GQ5VZR2 741 aa24.84■■□□□ 1.57
VDR-205ENST00000548664 STAC3Q96MF2 364 aa24.84■■□□□ 1.57
VDR-205ENST00000548664 PDE3BQ13370 1112 aa24.81■■□□□ 1.56
VDR-205ENST00000548664 ACEP12821 1306 aa24.81■■□□□ 1.56
VDR-205ENST00000548664 EVA1CP58658 441 aa24.8■■□□□ 1.56
VDR-205ENST00000548664 CDK19Q9BWU1 502 aa24.8■■□□□ 1.56
VDR-205ENST00000548664 KIAA1210Q9ULL0 1709 aa24.8■■□□□ 1.56
VDR-205ENST00000548664 CPDO75976 1380 aa24.8■■□□□ 1.56
VDR-205ENST00000548664 LARP1Q6PKG0 1096 aaKnown RBP24.79■■□□□ 1.56
VDR-205ENST00000548664 RGPD3A6NKT7 1758 aaPredicted RBP24.78■■□□□ 1.56
VDR-205ENST00000548664 RGPD4Q7Z3J3 1758 aa24.78■■□□□ 1.56
VDR-205ENST00000548664 SBF2Q86WG5 1849 aa24.78■■□□□ 1.56
VDR-205ENST00000548664 NBPF8Q3BBV2 869 aa24.78■■□□□ 1.56
VDR-205ENST00000548664 TCP11L2Q8N4U5 519 aa24.78■■□□□ 1.56
VDR-205ENST00000548664 PEAK1Q9H792 1746 aa24.78■■□□□ 1.56
VDR-205ENST00000548664 CCDC61Q9Y6R9 512 aa24.77■■□□□ 1.56
VDR-205ENST00000548664 USP19O94966 1318 aa24.77■■□□□ 1.56
VDR-205ENST00000548664 COL5A2P05997 1499 aaPredicted RBP24.76■■□□□ 1.55
VDR-205ENST00000548664 PLEKHG3A1L390 1219 aa24.75■■□□□ 1.55
VDR-205ENST00000548664 NBPF14Q5TI25 921 aa24.75■■□□□ 1.55
VDR-205ENST00000548664 ABTB2Q8N961 1025 aa24.75■■□□□ 1.55
VDR-205ENST00000548664 THRAP3Q9Y2W1 955 aaKnown RBP24.74■■□□□ 1.55
VDR-205ENST00000548664 LRRC37A3O60309 1634 aa24.74■■□□□ 1.55
VDR-205ENST00000548664 WNK3Q9BYP7 1800 aa24.72■■□□□ 1.55
VDR-205ENST00000548664 YY1P25490 414 aa24.71■■□□□ 1.55
VDR-205ENST00000548664 CRB1P82279 1406 aa24.69■■□□□ 1.54
VDR-205ENST00000548664 CASZ1Q86V15 1759 aa24.69■■□□□ 1.54
VDR-205ENST00000548664 OVOS2A0A0G2JMS6 1433 aa24.69■■□□□ 1.54
VDR-205ENST00000548664 OVOS2A0A0J9YW53 1432 aa24.69■■□□□ 1.54
VDR-205ENST00000548664 OVOS2Q6IE36 1432 aa24.69■■□□□ 1.54
VDR-205ENST00000548664 PPIP5K1Q6PFW1 1433 aa24.69■■□□□ 1.54
VDR-205ENST00000548664 GCP02774 474 aa24.68■■□□□ 1.54
VDR-205ENST00000548664 NLRP13Q86W25 1043 aa24.68■■□□□ 1.54
VDR-205ENST00000548664 SPON1Q9HCB6 807 aa24.68■■□□□ 1.54
VDR-205ENST00000548664 C11orf95C9JLR9 678 aaPredicted RBP24.66■■□□□ 1.54
VDR-205ENST00000548664 KCNQ2O43526 872 aa24.66■■□□□ 1.54
VDR-205ENST00000548664 COL18A1P39060 1754 aa24.66■■□□□ 1.54
VDR-205ENST00000548664 AKAP12Q02952 1782 aa24.66■■□□□ 1.54
VDR-205ENST00000548664 NINLQ9Y2I6 1382 aa24.66■■□□□ 1.54
VDR-205ENST00000548664 SLIT3O75094 1523 aa24.66■■□□□ 1.54
VDR-205ENST00000548664 QRICH2Q9H0J4 1663 aa24.66■■□□□ 1.54
VDR-205ENST00000548664 PPP1R1BQ9UD71 204 aaPredicted RBP24.65■■□□□ 1.54
VDR-205ENST00000548664 PIK3C2AO00443 1686 aa24.63■■□□□ 1.53
VDR-205ENST00000548664 BRD4O60885 1362 aaPredicted RBP24.63■■□□□ 1.53
VDR-205ENST00000548664 PLSCR1O15162 318 aa24.61■■□□□ 1.53
VDR-205ENST00000548664 SRPK2P78362 688 aaKnown RBP24.61■■□□□ 1.53
VDR-205ENST00000548664 AATKQ6ZMQ8 1374 aa24.61■■□□□ 1.53
VDR-205ENST00000548664 RGPD5Q99666 1765 aa24.61■■□□□ 1.53
VDR-205ENST00000548664 USP6P35125 1406 aa24.61■■□□□ 1.53
VDR-205ENST00000548664 NBPF1Q3BBV0 1214 aa24.6■■□□□ 1.53
VDR-205ENST00000548664 CABP2Q9NPB3 220 aa24.59■■□□□ 1.53
VDR-205ENST00000548664 ANO8Q9HCE9 1232 aaPredicted RBP24.58■■□□□ 1.53
VDR-205ENST00000548664 MYOM1P52179 1685 aa24.58■■□□□ 1.53
VDR-205ENST00000548664 CENPJQ9HC77 1338 aaPredicted RBP24.58■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms