RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 PHF8Q9UPP1 1060 aa21.42■■□□□ 1.02
PTCH1-217ENST00000548420 RRBP1Q9P2E9 1410 aaKnown RBP21.41■■□□□ 1.02
PTCH1-217ENST00000548420 VGFO15240 615 aaPredicted RBP21.41■■□□□ 1.02
PTCH1-217ENST00000548420 ATF5Q9Y2D1 282 aaPredicted RBP21.41■■□□□ 1.02
PTCH1-217ENST00000548420 FAM50AQ14320 339 aaKnown RBP21.39■■□□□ 1.01
PTCH1-217ENST00000548420 STK26Q9P289 416 aa21.38■■□□□ 1.01
PTCH1-217ENST00000548420 NRXN1Q9ULB1 1477 aa21.38■■□□□ 1.01
PTCH1-217ENST00000548420 KIF1BO60333 1816 aa21.37■■□□□ 1.01
PTCH1-217ENST00000548420 SHANK3Q9BYB0 1731 aa21.37■■□□□ 1.01
PTCH1-217ENST00000548420 TECPR2O15040 1411 aa21.37■■□□□ 1.01
PTCH1-217ENST00000548420 SGIP1Q9BQI5 828 aa21.35■■□□□ 1.01
PTCH1-217ENST00000548420 TRPM3Q9HCF6 1732 aaPredicted RBP21.33■■□□□ 1.01
PTCH1-217ENST00000548420 PDE3BQ13370 1112 aa21.32■■□□□ 1
PTCH1-217ENST00000548420 CRYBG1Q9Y4K1 1723 aa21.32■■□□□ 1
PTCH1-217ENST00000548420 ALS2Q96Q42 1657 aa21.31■■□□□ 1
PTCH1-217ENST00000548420 DLC1Q96QB1 1528 aa21.31■■□□□ 1
PTCH1-217ENST00000548420 PROM2Q8N271 834 aa21.31■■□□□ 1
PTCH1-217ENST00000548420 IFT172Q9UG01 1749 aa21.3■■□□□ 1
PTCH1-217ENST00000548420 USP35Q9P2H5 1018 aa21.3■■□□□ 1
PTCH1-217ENST00000548420 PPLO60437 1756 aa21.3■■□□□ 1
PTCH1-217ENST00000548420 PTF1AQ7RTS3 328 aa21.29■■□□□ 1
PTCH1-217ENST00000548420 PMFBP1Q8TBY8 1022 aa21.29■■□□□ 1
PTCH1-217ENST00000548420 STRN4Q9NRL3 753 aa21.29■■□□□ 1
PTCH1-217ENST00000548420 ABCC11Q96J66 1382 aa21.28■■□□□ 1
PTCH1-217ENST00000548420 BARGINQ6ZT62 677 aa21.28■■□□□ 1
PTCH1-217ENST00000548420 PRDM11Q9NQV5 511 aa21.28■■□□□ 1
PTCH1-217ENST00000548420 RGPD3A6NKT7 1758 aaPredicted RBP21.28■■□□□ 1
PTCH1-217ENST00000548420 RGPD4Q7Z3J3 1758 aa21.28■■□□□ 1
PTCH1-217ENST00000548420 PLSCR1O15162 318 aa21.27■■□□□ 1
PTCH1-217ENST00000548420 CHRNA2Q15822 529 aa21.27■■□□□ 1
PTCH1-217ENST00000548420 TMEM132EQ6IEE7 984 aa21.26■□□□□ 0.99
PTCH1-217ENST00000548420 RPGRIP1LQ68CZ1 1315 aa21.26■□□□□ 0.99
PTCH1-217ENST00000548420 ROCK1Q13464 1354 aa21.25■□□□□ 0.99
PTCH1-217ENST00000548420 HSPA6P17066 643 aa21.25■□□□□ 0.99
PTCH1-217ENST00000548420 KNDC1Q76NI1 1749 aa21.25■□□□□ 0.99
PTCH1-217ENST00000548420 GOLGB1Q14789 3259 aaKnown RBP21.25■□□□□ 0.99
PTCH1-217ENST00000548420 GPR162Q16538 588 aa21.24■□□□□ 0.99
PTCH1-217ENST00000548420 ADGRF5Q8IZF2 1346 aa21.24■□□□□ 0.99
PTCH1-217ENST00000548420 KIAA0232Q92628 1395 aa21.23■□□□□ 0.99
PTCH1-217ENST00000548420 SBF2Q86WG5 1849 aa21.23■□□□□ 0.99
PTCH1-217ENST00000548420 BCL11BQ9C0K0 894 aaPredicted RBP21.23■□□□□ 0.99
PTCH1-217ENST00000548420 PEAK1Q9H792 1746 aa21.23■□□□□ 0.99
PTCH1-217ENST00000548420 PPARGC1BQ86YN6 1023 aaKnown RBP21.22■□□□□ 0.99
PTCH1-217ENST00000548420 MAP3K5Q99683 1374 aa21.22■□□□□ 0.99
PTCH1-217ENST00000548420 ARXQ96QS3 562 aa21.21■□□□□ 0.99
PTCH1-217ENST00000548420 MTFR1LQ9H019 292 aa21.21■□□□□ 0.99
PTCH1-217ENST00000548420 LARP1Q6PKG0 1096 aaKnown RBP21.18■□□□□ 0.98
PTCH1-217ENST00000548420 SSH2Q76I76 1423 aa21.18■□□□□ 0.98
PTCH1-217ENST00000548420 SLC15A2Q16348 729 aa21.17■□□□□ 0.98
PTCH1-217ENST00000548420 CAPN15O75808 1086 aa21.16■□□□□ 0.98
PTCH1-217ENST00000548420 TCP11L2Q8N4U5 519 aa21.16■□□□□ 0.98
PTCH1-217ENST00000548420 PARP4Q9UKK3 1724 aaKnown RBP21.15■□□□□ 0.98
PTCH1-217ENST00000548420 YTHDC2Q9H6S0 1430 aaKnown RBP21.15■□□□□ 0.98
PTCH1-217ENST00000548420 ACIN1Q9UKV3 1341 aaKnown RBP21.14■□□□□ 0.97
PTCH1-217ENST00000548420 ZC3H6P61129 1189 aaKnown RBP21.14■□□□□ 0.97
PTCH1-217ENST00000548420 SIRT1Q96EB6 747 aa21.14■□□□□ 0.97
PTCH1-217ENST00000548420 STK32BQ9NY57 414 aa21.14■□□□□ 0.97
PTCH1-217ENST00000548420 OVOS2A0A0G2JMS6 1433 aa21.12■□□□□ 0.97
PTCH1-217ENST00000548420 OVOS2A0A0J9YW53 1432 aa21.12■□□□□ 0.97
PTCH1-217ENST00000548420 OVOS2Q6IE36 1432 aa21.12■□□□□ 0.97
PTCH1-217ENST00000548420 ATP10DQ9P241 1426 aa21.12■□□□□ 0.97
PTCH1-217ENST00000548420 EVA1CP58658 441 aa21.11■□□□□ 0.97
PTCH1-217ENST00000548420 TXNRD1Q16881 649 aa21.11■□□□□ 0.97
PTCH1-217ENST00000548420 COL13A1Q5TAT6 717 aaPredicted RBP21.11■□□□□ 0.97
PTCH1-217ENST00000548420 PELP1Q8IZL8 1130 aaKnown RBP21.11■□□□□ 0.97
PTCH1-217ENST00000548420 PHRF1Q9P1Y6 1649 aaKnown RBP21.11■□□□□ 0.97
PTCH1-217ENST00000548420 GPRASP1Q5JY77 1395 aa21.1■□□□□ 0.97
PTCH1-217ENST00000548420 SAFB2Q14151 953 aaKnown RBP eCLIP21.1■□□□□ 0.97
PTCH1-217ENST00000548420 ANKARQ7Z5J8 1434 aa21.1■□□□□ 0.97
PTCH1-217ENST00000548420 PRR36Q9H6K5 1346 aa21.09■□□□□ 0.97
PTCH1-217ENST00000548420 SLC34A2O95436 690 aa21.08■□□□□ 0.97
PTCH1-217ENST00000548420 ATP7BP35670 1465 aa21.07■□□□□ 0.96
PTCH1-217ENST00000548420 C11orf95C9JLR9 678 aaPredicted RBP21.07■□□□□ 0.96
PTCH1-217ENST00000548420 PAK3O75914 559 aaPredicted RBP21.07■□□□□ 0.96
PTCH1-217ENST00000548420 YBX3P16989 372 aaKnown RBP eCLIP21.07■□□□□ 0.96
PTCH1-217ENST00000548420 DNAJC5GQ8N7S2 189 aa21.07■□□□□ 0.96
PTCH1-217ENST00000548420 NLGN2Q8NFZ4 835 aa21.06■□□□□ 0.96
PTCH1-217ENST00000548420 THRAP3Q9Y2W1 955 aaKnown RBP21.06■□□□□ 0.96
PTCH1-217ENST00000548420 LMO7Q8WWI1 1683 aa21.05■□□□□ 0.96
PTCH1-217ENST00000548420 PRAM1Q96QH2 718 aa21.04■□□□□ 0.96
PTCH1-217ENST00000548420 DHX57Q6P158 1386 aaKnown RBP21.04■□□□□ 0.96
PTCH1-217ENST00000548420 LRRC37A3O60309 1634 aa21.04■□□□□ 0.96
PTCH1-217ENST00000548420 NUTM2GQ5VZR2 741 aa21.03■□□□□ 0.96
PTCH1-217ENST00000548420 KLHL34Q8N239 644 aa21.03■□□□□ 0.96
PTCH1-217ENST00000548420 GPBP1L1Q9HC44 474 aaPredicted RBP21.03■□□□□ 0.96
PTCH1-217ENST00000548420 PIK3C2GO75747 1445 aa21.03■□□□□ 0.96
PTCH1-217ENST00000548420 ITGAEP38570 1179 aa21.02■□□□□ 0.96
PTCH1-217ENST00000548420 PRELPP51888 382 aa21.02■□□□□ 0.96
PTCH1-217ENST00000548420 MARCH10Q8NA82 808 aaPredicted RBP21.01■□□□□ 0.95
PTCH1-217ENST00000548420 RGL3Q3MIN7 710 aa20.99■□□□□ 0.95
PTCH1-217ENST00000548420 ZNF526Q8TF50 670 aaPredicted RBP20.99■□□□□ 0.95
PTCH1-217ENST00000548420 PAPPAQ13219 1627 aa20.98■□□□□ 0.95
PTCH1-217ENST00000548420 ADCY9O60503 1353 aa20.97■□□□□ 0.95
PTCH1-217ENST00000548420 NGDNQ8NEJ9 315 aaKnown RBP20.97■□□□□ 0.95
PTCH1-217ENST00000548420 HIRIP3Q9BW71 556 aaPredicted RBP20.97■□□□□ 0.95
PTCH1-217ENST00000548420 BCL9O00512 1426 aa20.96■□□□□ 0.95
PTCH1-217ENST00000548420 COL24A1Q17RW2 1714 aa20.96■□□□□ 0.95
PTCH1-217ENST00000548420 DDB1Q16531 1140 aa20.96■□□□□ 0.95
PTCH1-217ENST00000548420 ZNF827Q17R98 1081 aa20.96■□□□□ 0.95
PTCH1-217ENST00000548420 AATKQ6ZMQ8 1374 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms