RNA–Protein interactions for RNA: ENST00000548092.5

TRAFD1-204, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-204ENST00000548092 CADPSQ9ULU8 1353 aa8.17□□□□□ -1.1
TRAFD1-204ENST00000548092 CSPP1Q1MSJ5 1256 aa8.16□□□□□ -1.1
TRAFD1-204ENST00000548092 ERCC6L2Q5T890 1561 aa8.16□□□□□ -1.1
TRAFD1-204ENST00000548092 RC3H1Q5TC82 1133 aaKnown RBP8.16□□□□□ -1.1
TRAFD1-204ENST00000548092 ZNF787Q6DD87 383 aa8.16□□□□□ -1.1
TRAFD1-204ENST00000548092 AAASQ9NRG9 546 aa8.16□□□□□ -1.1
TRAFD1-204ENST00000548092 EVA1BQ9NVM1 165 aa8.16□□□□□ -1.1
TRAFD1-204ENST00000548092 DACH1Q9UI36 760 aa8.16□□□□□ -1.1
TRAFD1-204ENST00000548092 CEP164Q9UPV0 1460 aa8.16□□□□□ -1.1
TRAFD1-204ENST00000548092 TTC24A2A3L6 582 aaPredicted RBP8.15□□□□□ -1.1
TRAFD1-204ENST00000548092 SPDYE5A6NIY4 337 aa8.15□□□□□ -1.1
TRAFD1-204ENST00000548092 J3QL48 77 aa8.15□□□□□ -1.1
TRAFD1-204ENST00000548092 CCNYL3P0C7X3 344 aa8.15□□□□□ -1.1
TRAFD1-204ENST00000548092 SMARCA4P51532 1647 aa8.14□□□□□ -1.11
TRAFD1-204ENST00000548092 SOCS7O14512 581 aa8.14□□□□□ -1.11
TRAFD1-204ENST00000548092 AVPP01185 164 aa8.14□□□□□ -1.11
TRAFD1-204ENST00000548092 SMPD1P17405 629 aa8.14□□□□□ -1.11
TRAFD1-204ENST00000548092 QPCTQ16769 361 aa8.14□□□□□ -1.11
TRAFD1-204ENST00000548092 PTPRNQ16849 979 aa8.14□□□□□ -1.11
TRAFD1-204ENST00000548092 DESI1Q6ICB0 168 aa8.14□□□□□ -1.11
TRAFD1-204ENST00000548092 SNIP1Q8TAD8 396 aaKnown RBP8.14□□□□□ -1.11
TRAFD1-204ENST00000548092 FBXO41Q8TF61 875 aa8.14□□□□□ -1.11
TRAFD1-204ENST00000548092 GPBP1L1Q9HC44 474 aaPredicted RBP8.14□□□□□ -1.11
TRAFD1-204ENST00000548092 WNT7BP56706 349 aa8.13□□□□□ -1.11
TRAFD1-204ENST00000548092 SH3BP2P78314 561 aa8.13□□□□□ -1.11
TRAFD1-204ENST00000548092 KCNH2Q12809 1159 aa8.13□□□□□ -1.11
TRAFD1-204ENST00000548092 UNC93B1Q9H1C4 597 aa8.13□□□□□ -1.11
TRAFD1-204ENST00000548092 ZBTB3Q9H5J0 574 aa8.13□□□□□ -1.11
TRAFD1-204ENST00000548092 PER1O15534 1290 aaPredicted RBP8.12□□□□□ -1.11
TRAFD1-204ENST00000548092 LYPD8Q6UX82 237 aa8.12□□□□□ -1.11
TRAFD1-204ENST00000548092 BAP1Q92560 729 aa8.12□□□□□ -1.11
TRAFD1-204ENST00000548092 POLR3EQ9NVU0 708 aa8.12□□□□□ -1.11
TRAFD1-204ENST00000548092 SIAH2O43255 324 aa8.11□□□□□ -1.11
TRAFD1-204ENST00000548092 LILRB3O75022 631 aa8.11□□□□□ -1.11
TRAFD1-204ENST00000548092 RTL5Q5HYW3 569 aaPredicted RBP8.11□□□□□ -1.11
TRAFD1-204ENST00000548092 PRPF38BQ5VTL8 546 aaKnown RBP8.11□□□□□ -1.11
TRAFD1-204ENST00000548092 PEG3Q9GZU2 1588 aa8.1□□□□□ -1.11
TRAFD1-204ENST00000548092 ZNF608Q9ULD9 1512 aaPredicted RBP8.1□□□□□ -1.11
TRAFD1-204ENST00000548092 LINC01559Q495D7 138 aa8.1□□□□□ -1.11
TRAFD1-204ENST00000548092 FBXO31Q5XUX0 539 aaPredicted RBP8.1□□□□□ -1.11
TRAFD1-204ENST00000548092 KDM4CQ9H3R0 1056 aa8.1□□□□□ -1.11
TRAFD1-204ENST00000548092 FANCD2Q9BXW9 1451 aa8.09□□□□□ -1.11
TRAFD1-204ENST00000548092 TUSC1Q2TAM9 212 aa8.09□□□□□ -1.11
TRAFD1-204ENST00000548092 CRIPAKQ8N1N5 446 aa8.09□□□□□ -1.11
TRAFD1-204ENST00000548092 HPS1Q92902 700 aa8.09□□□□□ -1.11
TRAFD1-204ENST00000548092 FAM117AQ9C073 453 aa8.09□□□□□ -1.11
TRAFD1-204ENST00000548092 MAP10Q9P2G4 905 aa8.09□□□□□ -1.11
TRAFD1-204ENST00000548092 URB2Q14146 1524 aaKnown RBP8.08□□□□□ -1.12
TRAFD1-204ENST00000548092 NUTM2BA6NNL0 878 aaPredicted RBP8.08□□□□□ -1.12
TRAFD1-204ENST00000548092 NUTM2EB1AL46 878 aaPredicted RBP8.08□□□□□ -1.12
TRAFD1-204ENST00000548092 CTHP32929 405 aa8.08□□□□□ -1.12
TRAFD1-204ENST00000548092 CLK2P49760 499 aaKnown RBP8.08□□□□□ -1.12
TRAFD1-204ENST00000548092 NUTM2DQ5VT03 806 aaPredicted RBP8.08□□□□□ -1.12
TRAFD1-204ENST00000548092 NUTM2AQ8IVF1 878 aaPredicted RBP8.08□□□□□ -1.12
TRAFD1-204ENST00000548092 HECW2Q9P2P5 1572 aa8.08□□□□□ -1.12
TRAFD1-204ENST00000548092 CHD1O14646 1710 aa8.08□□□□□ -1.12
TRAFD1-204ENST00000548092 AXIN1O15169 862 aa8.07□□□□□ -1.12
TRAFD1-204ENST00000548092 F12P00748 615 aaPredicted RBP8.07□□□□□ -1.12
TRAFD1-204ENST00000548092 SMCPP49901 116 aaPredicted RBP8.07□□□□□ -1.12
TRAFD1-204ENST00000548092 EHBP1Q8NDI1 1231 aa8.07□□□□□ -1.12
TRAFD1-204ENST00000548092 TSC1Q92574 1164 aa8.07□□□□□ -1.12
TRAFD1-204ENST00000548092 ZNF775Q96BV0 537 aaPredicted RBP8.07□□□□□ -1.12
TRAFD1-204ENST00000548092 PLEKHG3A1L390 1219 aa8.06□□□□□ -1.12
TRAFD1-204ENST00000548092 ALDH1A1P00352 501 aa8.06□□□□□ -1.12
TRAFD1-204ENST00000548092 ILDR2Q71H61 639 aa8.06□□□□□ -1.12
TRAFD1-204ENST00000548092 ZNF511Q8NB15 262 aa8.06□□□□□ -1.12
TRAFD1-204ENST00000548092 PROCA1Q8NCQ7 364 aaPredicted RBP8.06□□□□□ -1.12
TRAFD1-204ENST00000548092 RSPH6AQ9H0K4 717 aa8.06□□□□□ -1.12
TRAFD1-204ENST00000548092 CTC1Q2NKJ3 1217 aa8.05□□□□□ -1.12
TRAFD1-204ENST00000548092 GMPR2Q9P2T1 348 aaKnown RBP8.05□□□□□ -1.12
TRAFD1-204ENST00000548092 FOXJ1Q92949 421 aa8.04□□□□□ -1.12
TRAFD1-204ENST00000548092 IFT140Q96RY7 1462 aa8.04□□□□□ -1.12
TRAFD1-204ENST00000548092 EIF4G3O43432 1585 aaKnown RBP8.03□□□□□ -1.12
TRAFD1-204ENST00000548092 CTDSPL2Q05D32 466 aa8.03□□□□□ -1.12
TRAFD1-204ENST00000548092 SKIV2LQ15477 1246 aaKnown RBP8.03□□□□□ -1.12
TRAFD1-204ENST00000548092 CLASP1Q7Z460 1538 aa8.03□□□□□ -1.12
TRAFD1-204ENST00000548092 C4orf48Q5BLP8 95 aa8.02□□□□□ -1.13
TRAFD1-204ENST00000548092 TLL2Q9Y6L7 1015 aa8.02□□□□□ -1.13
TRAFD1-204ENST00000548092 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.01□□□□□ -1.13
TRAFD1-204ENST00000548092 VARSP26640 1264 aaKnown RBP8□□□□□ -1.13
TRAFD1-204ENST00000548092 SH3D19Q5HYK7 790 aa8□□□□□ -1.13
TRAFD1-204ENST00000548092 ATP13A2Q9NQ11 1180 aa8□□□□□ -1.13
TRAFD1-204ENST00000548092 DDRGK1Q96HY6 314 aa7.99□□□□□ -1.13
TRAFD1-204ENST00000548092 HELBQ8NG08 1087 aaPredicted RBP7.98□□□□□ -1.13
TRAFD1-204ENST00000548092 LRRN4Q8WUT4 740 aa7.98□□□□□ -1.13
TRAFD1-204ENST00000548092 WASF2Q9Y6W5 498 aa7.98□□□□□ -1.13
TRAFD1-204ENST00000548092 KIF13AQ9H1H9 1805 aa7.97□□□□□ -1.13
TRAFD1-204ENST00000548092 C11orf95C9JLR9 678 aaPredicted RBP7.97□□□□□ -1.13
TRAFD1-204ENST00000548092 PPP2R2DQ66LE6 453 aa7.97□□□□□ -1.13
TRAFD1-204ENST00000548092 MPNDQ8N594 471 aa7.97□□□□□ -1.13
TRAFD1-204ENST00000548092 GAPVD1Q14C86 1478 aa7.97□□□□□ -1.13
TRAFD1-204ENST00000548092 SYNJ2O15056 1496 aa7.96□□□□□ -1.13
TRAFD1-204ENST00000548092 SNRPBP14678 240 aaKnown RBP7.96□□□□□ -1.14
TRAFD1-204ENST00000548092 DISP3Q9P2K9 1392 aa7.96□□□□□ -1.14
TRAFD1-204ENST00000548092 TRIM46Q7Z4K8 759 aa7.95□□□□□ -1.14
TRAFD1-204ENST00000548092 SH3RF1Q7Z6J0 888 aa7.95□□□□□ -1.14
TRAFD1-204ENST00000548092 FAM174AQ8TBP5 190 aa7.95□□□□□ -1.14
TRAFD1-204ENST00000548092 CDK15Q96Q40 435 aa7.95□□□□□ -1.14
TRAFD1-204ENST00000548092 ATP1B4Q9UN42 357 aaPredicted RBP7.95□□□□□ -1.14
TRAFD1-204ENST00000548092 CAPN5O15484 640 aaPredicted RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms