RNA–Protein interactions for RNA: ENST00000547842.1

DDX23-205, Transcript of DEAD-box helicase 23, humanhuman

TSL 4

Gene DDX23, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-205ENST00000547842 NGDNQ8NEJ9 315 aaKnown RBP20.46■□□□□ 0.87
DDX23-205ENST00000547842 NRAPQ86VF7 1730 aa20.46■□□□□ 0.87
DDX23-205ENST00000547842 TRPM3Q9HCF6 1732 aaPredicted RBP20.45■□□□□ 0.86
DDX23-205ENST00000547842 PAK3O75914 559 aaPredicted RBP20.45■□□□□ 0.86
DDX23-205ENST00000547842 COL14A1Q05707 1796 aaKnown RBP20.44■□□□□ 0.86
DDX23-205ENST00000547842 ADGRB2O60241 1585 aa20.44■□□□□ 0.86
DDX23-205ENST00000547842 PRDM11Q9NQV5 511 aa20.44■□□□□ 0.86
DDX23-205ENST00000547842 ALS2Q96Q42 1657 aa20.43■□□□□ 0.86
DDX23-205ENST00000547842 R3HDM1Q15032 1099 aaKnown RBP20.43■□□□□ 0.86
DDX23-205ENST00000547842 KDM2AQ9Y2K7 1162 aa20.42■□□□□ 0.86
DDX23-205ENST00000547842 ADGRB1O14514 1584 aa20.42■□□□□ 0.86
DDX23-205ENST00000547842 DISP2A7MBM2 1401 aa20.41■□□□□ 0.86
DDX23-205ENST00000547842 EZH2Q15910 746 aaKnown RBP20.4■□□□□ 0.86
DDX23-205ENST00000547842 SPATA31A1Q5TZJ5 1347 aa20.4■□□□□ 0.86
DDX23-205ENST00000547842 FAM196AQ6ZSG2 479 aa20.4■□□□□ 0.86
DDX23-205ENST00000547842 STAC3Q96MF2 364 aa20.4■□□□□ 0.86
DDX23-205ENST00000547842 TULP4Q9NRJ4 1543 aa20.4■□□□□ 0.86
DDX23-205ENST00000547842 DCAF11Q8TEB1 546 aa20.39■□□□□ 0.85
DDX23-205ENST00000547842 CAMKK2Q96RR4 588 aa20.39■□□□□ 0.85
DDX23-205ENST00000547842 RGPD1P0DJD0 1748 aa20.39■□□□□ 0.85
DDX23-205ENST00000547842 NUDT16Q96DE0 195 aaKnown RBP20.38■□□□□ 0.85
DDX23-205ENST00000547842 TRIM37O94972 964 aa20.37■□□□□ 0.85
DDX23-205ENST00000547842 CHRNA2Q15822 529 aa20.37■□□□□ 0.85
DDX23-205ENST00000547842 KIAA0232Q92628 1395 aa20.36■□□□□ 0.85
DDX23-205ENST00000547842 THSD7AQ9UPZ6 1657 aa20.36■□□□□ 0.85
DDX23-205ENST00000547842 STRN4Q9NRL3 753 aa20.36■□□□□ 0.85
DDX23-205ENST00000547842 ZC3H6P61129 1189 aaKnown RBP20.35■□□□□ 0.85
DDX23-205ENST00000547842 APBA3O96018 575 aa20.34■□□□□ 0.85
DDX23-205ENST00000547842 CRYBG1Q9Y4K1 1723 aa20.33■□□□□ 0.85
DDX23-205ENST00000547842 EVA1CP58658 441 aa20.33■□□□□ 0.85
DDX23-205ENST00000547842 PDE3BQ13370 1112 aa20.32■□□□□ 0.84
DDX23-205ENST00000547842 NUTM2GQ5VZR2 741 aa20.32■□□□□ 0.84
DDX23-205ENST00000547842 BARGINQ6ZT62 677 aa20.32■□□□□ 0.84
DDX23-205ENST00000547842 CDK19Q9BWU1 502 aa20.32■□□□□ 0.84
DDX23-205ENST00000547842 PARD3Q8TEW0 1356 aa20.32■□□□□ 0.84
DDX23-205ENST00000547842 RAB3GAP2Q9H2M9 1393 aa20.32■□□□□ 0.84
DDX23-205ENST00000547842 USP35Q9P2H5 1018 aa20.31■□□□□ 0.84
DDX23-205ENST00000547842 TNS1Q9HBL0 1735 aaKnown RBP20.3■□□□□ 0.84
DDX23-205ENST00000547842 NBPF8Q3BBV2 869 aa20.3■□□□□ 0.84
DDX23-205ENST00000547842 ACEP12821 1306 aa20.29■□□□□ 0.84
DDX23-205ENST00000547842 CCDC61Q9Y6R9 512 aa20.29■□□□□ 0.84
DDX23-205ENST00000547842 ATP7BP35670 1465 aa20.29■□□□□ 0.84
DDX23-205ENST00000547842 POLR3AO14802 1390 aaPredicted RBP20.28■□□□□ 0.84
DDX23-205ENST00000547842 PLEKHG3A1L390 1219 aa20.27■□□□□ 0.84
DDX23-205ENST00000547842 NBPF14Q5TI25 921 aa20.27■□□□□ 0.84
DDX23-205ENST00000547842 LARP1Q6PKG0 1096 aaKnown RBP20.27■□□□□ 0.84
DDX23-205ENST00000547842 ABTB2Q8N961 1025 aa20.27■□□□□ 0.84
DDX23-205ENST00000547842 TCP11L2Q8N4U5 519 aa20.26■□□□□ 0.83
DDX23-205ENST00000547842 SSH2Q76I76 1423 aa20.26■□□□□ 0.83
DDX23-205ENST00000547842 ITSN1Q15811 1721 aa20.24■□□□□ 0.83
DDX23-205ENST00000547842 THRAP3Q9Y2W1 955 aaKnown RBP20.24■□□□□ 0.83
DDX23-205ENST00000547842 PHRF1Q9P1Y6 1649 aaKnown RBP20.23■□□□□ 0.83
DDX23-205ENST00000547842 CAMTA1Q9Y6Y1 1673 aa20.22■□□□□ 0.83
DDX23-205ENST00000547842 CPDO75976 1380 aa20.22■□□□□ 0.83
DDX23-205ENST00000547842 NLRP13Q86W25 1043 aa20.22■□□□□ 0.83
DDX23-205ENST00000547842 C11orf95C9JLR9 678 aaPredicted RBP20.21■□□□□ 0.83
DDX23-205ENST00000547842 GCP02774 474 aa20.21■□□□□ 0.83
DDX23-205ENST00000547842 ARHGEF28Q8N1W1 1705 aaKnown RBP20.21■□□□□ 0.83
DDX23-205ENST00000547842 USP19O94966 1318 aa20.2■□□□□ 0.82
DDX23-205ENST00000547842 SPON1Q9HCB6 807 aa20.19■□□□□ 0.82
DDX23-205ENST00000547842 KCNQ2O43526 872 aa20.17■□□□□ 0.82
DDX23-205ENST00000547842 YY1P25490 414 aa20.17■□□□□ 0.82
DDX23-205ENST00000547842 RREB1Q92766 1687 aa20.16■□□□□ 0.82
DDX23-205ENST00000547842 SRPK2P78362 688 aaKnown RBP20.15■□□□□ 0.82
DDX23-205ENST00000547842 PPP1R1BQ9UD71 204 aaPredicted RBP20.15■□□□□ 0.82
DDX23-205ENST00000547842 NRKQ7Z2Y5 1582 aa20.15■□□□□ 0.82
DDX23-205ENST00000547842 LMO7Q8WWI1 1683 aa20.15■□□□□ 0.82
DDX23-205ENST00000547842 TOPAZ1Q8N9V7 1692 aa20.14■□□□□ 0.81
DDX23-205ENST00000547842 PLSCR1O15162 318 aa20.14■□□□□ 0.81
DDX23-205ENST00000547842 NBPF1Q3BBV0 1214 aa20.14■□□□□ 0.81
DDX23-205ENST00000547842 NUP188Q5SRE5 1749 aa20.13■□□□□ 0.81
DDX23-205ENST00000547842 BRD4O60885 1362 aaPredicted RBP20.13■□□□□ 0.81
DDX23-205ENST00000547842 DCAF8L1A6NGE4 600 aa20.13■□□□□ 0.81
DDX23-205ENST00000547842 COL5A2P05997 1499 aaPredicted RBP20.12■□□□□ 0.81
DDX23-205ENST00000547842 CRB1P82279 1406 aa20.12■□□□□ 0.81
DDX23-205ENST00000547842 CABP2Q9NPB3 220 aa20.12■□□□□ 0.81
DDX23-205ENST00000547842 PPIP5K1Q6PFW1 1433 aa20.11■□□□□ 0.81
DDX23-205ENST00000547842 NLRP6P59044 892 aa20.11■□□□□ 0.81
DDX23-205ENST00000547842 AATKQ6ZMQ8 1374 aa20.1■□□□□ 0.81
DDX23-205ENST00000547842 DDB1Q16531 1140 aa20.1■□□□□ 0.81
DDX23-205ENST00000547842 OVOS2A0A0G2JMS6 1433 aa20.1■□□□□ 0.81
DDX23-205ENST00000547842 OVOS2A0A0J9YW53 1432 aa20.1■□□□□ 0.81
DDX23-205ENST00000547842 OVOS2Q6IE36 1432 aa20.1■□□□□ 0.81
DDX23-205ENST00000547842 CENPJQ9HC77 1338 aaPredicted RBP20.09■□□□□ 0.81
DDX23-205ENST00000547842 ZBTB7CA1YPR0 619 aa20.09■□□□□ 0.81
DDX23-205ENST00000547842 BCL11BQ9C0K0 894 aaPredicted RBP20.09■□□□□ 0.81
DDX23-205ENST00000547842 CABP1Q9NZU7 370 aa20.09■□□□□ 0.81
DDX23-205ENST00000547842 PARP4Q9UKK3 1724 aaKnown RBP20.09■□□□□ 0.81
DDX23-205ENST00000547842 TOM1L2Q6ZVM7 507 aa20.08■□□□□ 0.81
DDX23-205ENST00000547842 NINLQ9Y2I6 1382 aa20.08■□□□□ 0.8
DDX23-205ENST00000547842 KIAA1210Q9ULL0 1709 aa20.07■□□□□ 0.8
DDX23-205ENST00000547842 PTF1AQ7RTS3 328 aa20.05■□□□□ 0.8
DDX23-205ENST00000547842 PROM2Q8N271 834 aa20.05■□□□□ 0.8
DDX23-205ENST00000547842 AXIN2Q9Y2T1 843 aa20.05■□□□□ 0.8
DDX23-205ENST00000547842 USP6P35125 1406 aa20.04■□□□□ 0.8
DDX23-205ENST00000547842 CDCA7Q9BWT1 371 aaPredicted RBP20.04■□□□□ 0.8
DDX23-205ENST00000547842 ANO8Q9HCE9 1232 aaPredicted RBP20.04■□□□□ 0.8
DDX23-205ENST00000547842 PEAK1Q9H792 1746 aa20.04■□□□□ 0.8
DDX23-205ENST00000547842 MARCH10Q8NA82 808 aaPredicted RBP20.03■□□□□ 0.8
DDX23-205ENST00000547842 WDR17Q8IZU2 1322 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms