RNA–Protein interactions for RNA: ENST00000547130.5

PFDN5-204, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-204ENST00000547130 RGS12O14924 1447 aa17.24■□□□□ 0.35
PFDN5-204ENST00000547130 POLR3AO14802 1390 aaPredicted RBP17.24■□□□□ 0.35
PFDN5-204ENST00000547130 ACEP12821 1306 aa17.23■□□□□ 0.35
PFDN5-204ENST00000547130 COL14A1Q05707 1796 aaKnown RBP17.23■□□□□ 0.35
PFDN5-204ENST00000547130 QTRT2Q9H974 415 aaKnown RBP17.23■□□□□ 0.35
PFDN5-204ENST00000547130 AKAP12Q02952 1782 aa17.23■□□□□ 0.35
PFDN5-204ENST00000547130 TRPC5Q9UL62 973 aaPredicted RBP17.22■□□□□ 0.35
PFDN5-204ENST00000547130 ATRNO75882 1429 aa17.21■□□□□ 0.35
PFDN5-204ENST00000547130 SLIT2O94813 1529 aa17.21■□□□□ 0.35
PFDN5-204ENST00000547130 NRAPQ86VF7 1730 aa17.21■□□□□ 0.35
PFDN5-204ENST00000547130 NRKQ7Z2Y5 1582 aa17.21■□□□□ 0.35
PFDN5-204ENST00000547130 BCL9LQ86UU0 1499 aa17.21■□□□□ 0.35
PFDN5-204ENST00000547130 RBM6P78332 1123 aaKnown RBP17.2■□□□□ 0.34
PFDN5-204ENST00000547130 FNBP4Q8N3X1 1017 aaPredicted RBP17.2■□□□□ 0.34
PFDN5-204ENST00000547130 SBNO2Q9Y2G9 1366 aa17.19■□□□□ 0.34
PFDN5-204ENST00000547130 ATAD2Q6PL18 1390 aa17.18■□□□□ 0.34
PFDN5-204ENST00000547130 PLEKHG3A1L390 1219 aa17.18■□□□□ 0.34
PFDN5-204ENST00000547130 USP6P35125 1406 aa17.18■□□□□ 0.34
PFDN5-204ENST00000547130 MON2Q7Z3U7 1717 aa17.18■□□□□ 0.34
PFDN5-204ENST00000547130 PIK3C2AO00443 1686 aa17.17■□□□□ 0.34
PFDN5-204ENST00000547130 GLI3P10071 1580 aa17.17■□□□□ 0.34
PFDN5-204ENST00000547130 NUTM2GQ5VZR2 741 aa17.17■□□□□ 0.34
PFDN5-204ENST00000547130 CLSPNQ9HAW4 1339 aa17.17■□□□□ 0.34
PFDN5-204ENST00000547130 UNC5CLQ8IV45 518 aa17.15■□□□□ 0.34
PFDN5-204ENST00000547130 CCER1Q8TC90 406 aaPredicted RBP17.15■□□□□ 0.34
PFDN5-204ENST00000547130 CABP1Q9NZU7 370 aa17.15■□□□□ 0.34
PFDN5-204ENST00000547130 CCDC9Q9Y3X0 531 aaKnown RBP17.15■□□□□ 0.34
PFDN5-204ENST00000547130 ABTB2Q8N961 1025 aa17.14■□□□□ 0.33
PFDN5-204ENST00000547130 PRDM11Q9NQV5 511 aa17.13■□□□□ 0.33
PFDN5-204ENST00000547130 BRD4O60885 1362 aaPredicted RBP17.13■□□□□ 0.33
PFDN5-204ENST00000547130 KIAA0232Q92628 1395 aa17.12■□□□□ 0.33
PFDN5-204ENST00000547130 USP47Q96K76 1375 aa17.12■□□□□ 0.33
PFDN5-204ENST00000547130 GJD4Q96KN9 370 aaPredicted RBP17.11■□□□□ 0.33
PFDN5-204ENST00000547130 FAM83GA6ND36 823 aa17.1■□□□□ 0.33
PFDN5-204ENST00000547130 BTG4Q9NY30 223 aa17.1■□□□□ 0.33
PFDN5-204ENST00000547130 BRWD3Q6RI45 1802 aa17.1■□□□□ 0.33
PFDN5-204ENST00000547130 ZC3H6P61129 1189 aaKnown RBP17.09■□□□□ 0.33
PFDN5-204ENST00000547130 TMC1Q8TDI8 760 aa17.09■□□□□ 0.33
PFDN5-204ENST00000547130 USP19O94966 1318 aa17.09■□□□□ 0.33
PFDN5-204ENST00000547130 KTN1Q86UP2 1357 aaKnown RBP17.09■□□□□ 0.33
PFDN5-204ENST00000547130 SLIT3O75094 1523 aa17.09■□□□□ 0.33
PFDN5-204ENST00000547130 LMO7Q8WWI1 1683 aa17.08■□□□□ 0.32
PFDN5-204ENST00000547130 ST20-MTHFSA0A0A6YYL1 179 aa17.08■□□□□ 0.32
PFDN5-204ENST00000547130 A0A0G2JS52 829 aa17.08■□□□□ 0.32
PFDN5-204ENST00000547130 MYT1Q01538 1121 aa17.08■□□□□ 0.32
PFDN5-204ENST00000547130 NLRP13Q86W25 1043 aa17.08■□□□□ 0.32
PFDN5-204ENST00000547130 CPSF1Q10570 1443 aaKnown RBP17.07■□□□□ 0.32
PFDN5-204ENST00000547130 ZBTB7CA1YPR0 619 aa17.07■□□□□ 0.32
PFDN5-204ENST00000547130 CHRNA2Q15822 529 aa17.07■□□□□ 0.32
PFDN5-204ENST00000547130 VPS72Q15906 364 aa17.07■□□□□ 0.32
PFDN5-204ENST00000547130 TIMELESSQ9UNS1 1208 aa17.07■□□□□ 0.32
PFDN5-204ENST00000547130 SSH2Q76I76 1423 aa17.06■□□□□ 0.32
PFDN5-204ENST00000547130 NLRP6P59044 892 aa17.06■□□□□ 0.32
PFDN5-204ENST00000547130 STRN4Q9NRL3 753 aa17.05■□□□□ 0.32
PFDN5-204ENST00000547130 CD163L1Q9NR16 1453 aa17.05■□□□□ 0.32
PFDN5-204ENST00000547130 USP54Q70EL1 1684 aa17.04■□□□□ 0.32
PFDN5-204ENST00000547130 TTC21BQ7Z4L5 1316 aa17.04■□□□□ 0.32
PFDN5-204ENST00000547130 TTC21AQ8NDW8 1320 aa17.04■□□□□ 0.32
PFDN5-204ENST00000547130 HDGFL2Q7Z4V5 671 aaPredicted RBP17.04■□□□□ 0.32
PFDN5-204ENST00000547130 ZNF692Q9BU19 519 aaPredicted RBP17.04■□□□□ 0.32
PFDN5-204ENST00000547130 CPDO75976 1380 aa17.03■□□□□ 0.32
PFDN5-204ENST00000547130 UPF1Q92900 1129 aaKnown RBP eCLIP17.03■□□□□ 0.32
PFDN5-204ENST00000547130 TESK2Q96S53 571 aa17.03■□□□□ 0.32
PFDN5-204ENST00000547130 A0A1W2PP64 1363 aa17.02■□□□□ 0.32
PFDN5-204ENST00000547130 NINLQ9Y2I6 1382 aa17.02■□□□□ 0.32
PFDN5-204ENST00000547130 THSD7AQ9UPZ6 1657 aa17.02■□□□□ 0.32
PFDN5-204ENST00000547130 SOX12O15370 315 aa17.02■□□□□ 0.32
PFDN5-204ENST00000547130 GCP02774 474 aa17.02■□□□□ 0.32
PFDN5-204ENST00000547130 LTN1O94822 1766 aa17.02■□□□□ 0.31
PFDN5-204ENST00000547130 MYOM1P52179 1685 aa17.01■□□□□ 0.31
PFDN5-204ENST00000547130 CAMTA1Q9Y6Y1 1673 aa17.01■□□□□ 0.31
PFDN5-204ENST00000547130 SLC24A1O60721 1099 aa17.01■□□□□ 0.31
PFDN5-204ENST00000547130 TMF1P82094 1093 aa17.01■□□□□ 0.31
PFDN5-204ENST00000547130 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.01■□□□□ 0.31
PFDN5-204ENST00000547130 EDC4Q6P2E9 1401 aaKnown RBP17.01■□□□□ 0.31
PFDN5-204ENST00000547130 COL5A2P05997 1499 aaPredicted RBP17■□□□□ 0.31
PFDN5-204ENST00000547130 FAM98CQ17RN3 349 aaKnown RBP17■□□□□ 0.31
PFDN5-204ENST00000547130 SEPT12Q8IYM1 358 aa17■□□□□ 0.31
PFDN5-204ENST00000547130 TERF2IPQ9NYB0 399 aa17■□□□□ 0.31
PFDN5-204ENST00000547130 NFAT5O94916 1531 aa17■□□□□ 0.31
PFDN5-204ENST00000547130 RGPD5Q99666 1765 aa17■□□□□ 0.31
PFDN5-204ENST00000547130 EVA1CP58658 441 aa16.99■□□□□ 0.31
PFDN5-204ENST00000547130 SLC12A5Q9H2X9 1139 aa16.99■□□□□ 0.31
PFDN5-204ENST00000547130 SPATA31A5Q5VU36 1347 aa16.98■□□□□ 0.31
PFDN5-204ENST00000547130 SPATA31A7Q8IWB4 1347 aa16.98■□□□□ 0.31
PFDN5-204ENST00000547130 KIF20BQ96Q89 1820 aa16.98■□□□□ 0.31
PFDN5-204ENST00000547130 WNK3Q9BYP7 1800 aa16.98■□□□□ 0.31
PFDN5-204ENST00000547130 USP35Q9P2H5 1018 aa16.98■□□□□ 0.31
PFDN5-204ENST00000547130 COL18A1P39060 1754 aa16.97■□□□□ 0.31
PFDN5-204ENST00000547130 KCNH5Q8NCM2 988 aa16.97■□□□□ 0.31
PFDN5-204ENST00000547130 PUS7Q96PZ0 661 aaKnown RBP16.97■□□□□ 0.31
PFDN5-204ENST00000547130 NME9Q86XW9 330 aa16.96■□□□□ 0.31
PFDN5-204ENST00000547130 ANKRD36BQ8N2N9 1353 aa16.95■□□□□ 0.3
PFDN5-204ENST00000547130 ABCC6O95255 1503 aa16.95■□□□□ 0.3
PFDN5-204ENST00000547130 SPATA31A1Q5TZJ5 1347 aa16.95■□□□□ 0.3
PFDN5-204ENST00000547130 AATKQ6ZMQ8 1374 aa16.94■□□□□ 0.3
PFDN5-204ENST00000547130 CDCA8Q53HL2 280 aa16.94■□□□□ 0.3
PFDN5-204ENST00000547130 KRT27Q7Z3Y8 459 aa16.94■□□□□ 0.3
PFDN5-204ENST00000547130 ZRANB1Q9UGI0 708 aa16.94■□□□□ 0.3
PFDN5-204ENST00000547130 OVOS2A0A0J9YW53 1432 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 853.6 ms