RNA–Protein interactions for RNA: ENST00000546964.5

PFKM-206, Transcript of phosphofructokinase, muscle, humanhuman

TSL 1 (best)

Gene PFKM, Length 3,063 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-206ENST00000546964 NBPF3Q9H094 633 aa13.28□□□□□ -0.28
PFKM-206ENST00000546964 DEF6Q9H4E7 631 aa13.28□□□□□ -0.28
PFKM-206ENST00000546964 ZNF446Q9NWS9 450 aa13.28□□□□□ -0.28
PFKM-206ENST00000546964 RIPOR2Q9Y4F9 1068 aa13.28□□□□□ -0.28
PFKM-206ENST00000546964 RBM26Q5T8P6 1007 aaKnown RBP13.28□□□□□ -0.28
PFKM-206ENST00000546964 TRIM74Q86UV6 250 aa13.28□□□□□ -0.28
PFKM-206ENST00000546964 TRIM73Q86UV7 250 aa13.28□□□□□ -0.28
PFKM-206ENST00000546964 NOLC1Q14978 699 aaKnown RBP eCLIP13.27□□□□□ -0.28
PFKM-206ENST00000546964 CTR9Q6PD62 1173 aa13.27□□□□□ -0.28
PFKM-206ENST00000546964 OATP04181 439 aa13.26□□□□□ -0.29
PFKM-206ENST00000546964 ATP6V1AP38606 617 aa13.26□□□□□ -0.29
PFKM-206ENST00000546964 CCDC91Q7Z6B0 441 aa13.26□□□□□ -0.29
PFKM-206ENST00000546964 PRIMPOLQ96LW4 560 aa13.26□□□□□ -0.29
PFKM-206ENST00000546964 MAP2K2P36507 400 aa13.26□□□□□ -0.29
PFKM-206ENST00000546964 ZSCAN26Q16670 478 aa13.26□□□□□ -0.29
PFKM-206ENST00000546964 ZNF280DQ6N043 979 aa13.26□□□□□ -0.29
PFKM-206ENST00000546964 TMEM165Q9HC07 324 aa13.26□□□□□ -0.29
PFKM-206ENST00000546964 ZKSCAN5Q9Y2L8 839 aa13.26□□□□□ -0.29
PFKM-206ENST00000546964 NEBLO76041 1014 aa13.26□□□□□ -0.29
PFKM-206ENST00000546964 ZRSR2Q15696 482 aaKnown RBP13.26□□□□□ -0.29
PFKM-206ENST00000546964 NEK11Q8NG66 645 aa13.26□□□□□ -0.29
PFKM-206ENST00000546964 NME8Q8N427 588 aa13.25□□□□□ -0.29
PFKM-206ENST00000546964 ATP2B1P20020 1258 aa13.25□□□□□ -0.29
PFKM-206ENST00000546964 CTAGE5O15320 804 aa13.24□□□□□ -0.29
PFKM-206ENST00000546964 GOLGA6L1Q8N7Z2 621 aa13.24□□□□□ -0.29
PFKM-206ENST00000546964 PACS2Q86VP3 889 aa13.24□□□□□ -0.29
PFKM-206ENST00000546964 GOLGA6L6A8MZA4 724 aa13.24□□□□□ -0.29
PFKM-206ENST00000546964 C11orf91Q3C1V1 193 aa13.24□□□□□ -0.29
PFKM-206ENST00000546964 ANKRD20A12PQ8NF67 263 aa13.24□□□□□ -0.29
PFKM-206ENST00000546964 ANTXR1Q9H6X2 564 aa13.24□□□□□ -0.29
PFKM-206ENST00000546964 U2SURPO15042 1029 aaKnown RBP13.23□□□□□ -0.29
PFKM-206ENST00000546964 CCDC181Q5TID7 509 aa13.23□□□□□ -0.29
PFKM-206ENST00000546964 SUDS3Q9H7L9 328 aaPredicted RBP13.23□□□□□ -0.29
PFKM-206ENST00000546964 U2AF1L5P0DN76 240 aaPredicted RBP13.23□□□□□ -0.29
PFKM-206ENST00000546964 U2AF1Q01081 240 aaKnown RBP eCLIP13.23□□□□□ -0.29
PFKM-206ENST00000546964 C8orf34Q49A92 452 aa13.23□□□□□ -0.29
PFKM-206ENST00000546964 NFXL1Q6ZNB6 911 aa13.23□□□□□ -0.29
PFKM-206ENST00000546964 FEZ1Q99689 392 aa13.23□□□□□ -0.29
PFKM-206ENST00000546964 PHLDB1Q86UU1 1377 aa13.22□□□□□ -0.29
PFKM-206ENST00000546964 NAA30Q147X3 362 aaPredicted RBP13.22□□□□□ -0.29
PFKM-206ENST00000546964 PHC3Q8NDX5 983 aa13.22□□□□□ -0.29
PFKM-206ENST00000546964 LIG1P18858 919 aa13.21□□□□□ -0.29
PFKM-206ENST00000546964 CALRP27797 417 aaKnown RBP13.21□□□□□ -0.29
PFKM-206ENST00000546964 MSL3Q8N5Y2 521 aaKnown RBP13.21□□□□□ -0.29
PFKM-206ENST00000546964 FMNL2Q96PY5 1086 aa13.21□□□□□ -0.29
PFKM-206ENST00000546964 ANAPC4Q9UJX5 808 aa13.21□□□□□ -0.29
PFKM-206ENST00000546964 AP1G2O75843 785 aa13.21□□□□□ -0.29
PFKM-206ENST00000546964 KIF4AO95239 1232 aa13.21□□□□□ -0.29
PFKM-206ENST00000546964 KLHL23Q8NBE8 558 aa13.21□□□□□ -0.3
PFKM-206ENST00000546964 YIPF2Q9BWQ6 316 aa13.21□□□□□ -0.3
PFKM-206ENST00000546964 CPSF2Q9P2I0 782 aaKnown RBP13.21□□□□□ -0.3
PFKM-206ENST00000546964 DHX57Q6P158 1386 aaKnown RBP13.2□□□□□ -0.3
PFKM-206ENST00000546964 NOL8Q76FK4 1167 aaKnown RBP13.2□□□□□ -0.3
PFKM-206ENST00000546964 ZNF396Q96N95 335 aaPredicted RBP13.2□□□□□ -0.3
PFKM-206ENST00000546964 FAM210AQ96ND0 272 aa13.2□□□□□ -0.3
PFKM-206ENST00000546964 NAT2P11245 290 aa13.2□□□□□ -0.3
PFKM-206ENST00000546964 TTC30AQ86WT1 665 aa13.19□□□□□ -0.3
PFKM-206ENST00000546964 SPC24Q8NBT2 197 aa13.19□□□□□ -0.3
PFKM-206ENST00000546964 LMNB1P20700 586 aa13.19□□□□□ -0.3
PFKM-206ENST00000546964 GSCP56915 257 aaPredicted RBP13.19□□□□□ -0.3
PFKM-206ENST00000546964 SNX1Q13596 522 aa13.19□□□□□ -0.3
PFKM-206ENST00000546964 KRBA2Q6ZNG9 492 aa13.19□□□□□ -0.3
PFKM-206ENST00000546964 ARPC5LQ9BPX5 153 aa13.19□□□□□ -0.3
PFKM-206ENST00000546964 EPB41L2O43491 1005 aaKnown RBP13.19□□□□□ -0.3
PFKM-206ENST00000546964 TTC31Q49AM3 519 aaPredicted RBP13.19□□□□□ -0.3
PFKM-206ENST00000546964 CDC37L1Q7L3B6 337 aa13.19□□□□□ -0.3
PFKM-206ENST00000546964 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.19□□□□□ -0.3
PFKM-206ENST00000546964 CTNNA3Q9UI47 895 aa13.19□□□□□ -0.3
PFKM-206ENST00000546964 NEXNQ0ZGT2 675 aa13.18□□□□□ -0.3
PFKM-206ENST00000546964 AKNAD1Q5T1N1 836 aa13.18□□□□□ -0.3
PFKM-206ENST00000546964 SMARCA5O60264 1052 aaPredicted RBP13.18□□□□□ -0.3
PFKM-206ENST00000546964 PEX14O75381 377 aa13.18□□□□□ -0.3
PFKM-206ENST00000546964 FCHSD2O94868 740 aa13.18□□□□□ -0.3
PFKM-206ENST00000546964 SMARCA2P51531 1590 aa13.17□□□□□ -0.3
PFKM-206ENST00000546964 KINO60870 393 aaKnown RBP13.17□□□□□ -0.3
PFKM-206ENST00000546964 HMGN5P82970 282 aaKnown RBP13.17□□□□□ -0.3
PFKM-206ENST00000546964 SWT1Q5T5J6 900 aaKnown RBP13.17□□□□□ -0.3
PFKM-206ENST00000546964 GPBP1L1Q9HC44 474 aaPredicted RBP13.17□□□□□ -0.3
PFKM-206ENST00000546964 NUDCQ9Y266 331 aa13.17□□□□□ -0.3
PFKM-206ENST00000546964 CCDC15Q0P6D6 951 aa13.17□□□□□ -0.3
PFKM-206ENST00000546964 CENPOQ9BU64 300 aa13.17□□□□□ -0.3
PFKM-206ENST00000546964 IQSEC3Q9UPP2 1182 aaPredicted RBP13.17□□□□□ -0.3
PFKM-206ENST00000546964 TESPA1A2RU30 521 aaPredicted RBP13.16□□□□□ -0.3
PFKM-206ENST00000546964 ANKRD65E5RJM6 399 aa13.16□□□□□ -0.3
PFKM-206ENST00000546964 CCDC191Q8NCU4 936 aa13.16□□□□□ -0.3
PFKM-206ENST00000546964 MRS2Q9HD23 443 aa13.16□□□□□ -0.3
PFKM-206ENST00000546964 CADPSQ9ULU8 1353 aa13.16□□□□□ -0.3
PFKM-206ENST00000546964 HMGXB3Q12766 1538 aa13.16□□□□□ -0.3
PFKM-206ENST00000546964 RBM47A0AV96 593 aaKnown RBP13.16□□□□□ -0.3
PFKM-206ENST00000546964 RIOK3O14730 519 aaKnown RBP13.16□□□□□ -0.3
PFKM-206ENST00000546964 INF2Q27J81 1249 aa13.16□□□□□ -0.3
PFKM-206ENST00000546964 HDGFL1Q5TGJ6 251 aa13.16□□□□□ -0.3
PFKM-206ENST00000546964 ETAA1Q9NY74 926 aa13.16□□□□□ -0.3
PFKM-206ENST00000546964 DDX41Q9UJV9 622 aaKnown RBP13.16□□□□□ -0.3
PFKM-206ENST00000546964 CTDP1Q9Y5B0 961 aaPredicted RBP13.16□□□□□ -0.3
PFKM-206ENST00000546964 PEG3Q9GZU2 1588 aa13.16□□□□□ -0.3
PFKM-206ENST00000546964 NINLQ9Y2I6 1382 aa13.16□□□□□ -0.3
PFKM-206ENST00000546964 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.16□□□□□ -0.3
PFKM-206ENST00000546964 SEC24BO95487 1268 aa13.16□□□□□ -0.3
PFKM-206ENST00000546964 BMS1Q14692 1282 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms