RNA–Protein interactions for RNA: ENST00000545807.6

NECAP1-208, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-208ENST00000545807 PPP6R1Q9UPN7 881 aa8.48□□□□□ -1.05
NECAP1-208ENST00000545807 MYBBP1AQ9BQG0 1328 aaKnown RBP8.48□□□□□ -1.05
NECAP1-208ENST00000545807 PIK3C2BO00750 1634 aa8.48□□□□□ -1.05
NECAP1-208ENST00000545807 RALBP1Q15311 655 aa8.48□□□□□ -1.05
NECAP1-208ENST00000545807 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.48□□□□□ -1.05
NECAP1-208ENST00000545807 WWC1Q8IX03 1113 aa8.48□□□□□ -1.05
NECAP1-208ENST00000545807 KIAA1211Q6ZU35 1233 aa8.47□□□□□ -1.05
NECAP1-208ENST00000545807 PNISRQ8TF01 805 aaKnown RBP8.47□□□□□ -1.05
NECAP1-208ENST00000545807 ERBB4Q15303 1308 aa8.47□□□□□ -1.05
NECAP1-208ENST00000545807 MYOM2P54296 1465 aa8.47□□□□□ -1.05
NECAP1-208ENST00000545807 PLEKHH1Q9ULM0 1364 aa8.47□□□□□ -1.05
NECAP1-208ENST00000545807 FBLN1P23142 703 aa8.47□□□□□ -1.05
NECAP1-208ENST00000545807 EVC2Q86UK5 1308 aa8.47□□□□□ -1.05
NECAP1-208ENST00000545807 NLRP13Q86W25 1043 aa8.47□□□□□ -1.05
NECAP1-208ENST00000545807 CCDC146Q8IYE0 955 aa8.47□□□□□ -1.05
NECAP1-208ENST00000545807 CDK19Q9BWU1 502 aa8.47□□□□□ -1.05
NECAP1-208ENST00000545807 NEXMIFQ5QGS0 1516 aa8.46□□□□□ -1.05
NECAP1-208ENST00000545807 GGNBP2Q9H3C7 697 aa8.46□□□□□ -1.05
NECAP1-208ENST00000545807 CABP1Q9NZU7 370 aa8.46□□□□□ -1.05
NECAP1-208ENST00000545807 TAOK2Q9UL54 1235 aa8.46□□□□□ -1.05
NECAP1-208ENST00000545807 A2ML1A8K2U0 1454 aa8.46□□□□□ -1.06
NECAP1-208ENST00000545807 SOX12O15370 315 aa8.46□□□□□ -1.06
NECAP1-208ENST00000545807 MORC1Q86VD1 984 aa8.46□□□□□ -1.06
NECAP1-208ENST00000545807 EID1Q9Y6B2 187 aa8.46□□□□□ -1.06
NECAP1-208ENST00000545807 AGLP35573 1532 aa8.46□□□□□ -1.06
NECAP1-208ENST00000545807 METP08581 1390 aa8.46□□□□□ -1.06
NECAP1-208ENST00000545807 PPLO60437 1756 aa8.46□□□□□ -1.06
NECAP1-208ENST00000545807 PPP2R1AP30153 589 aa8.45□□□□□ -1.06
NECAP1-208ENST00000545807 PRDM10Q9NQV6 1147 aa8.45□□□□□ -1.06
NECAP1-208ENST00000545807 ZBED9Q6R2W3 1325 aa8.45□□□□□ -1.06
NECAP1-208ENST00000545807 NEUROD2Q15784 382 aa8.45□□□□□ -1.06
NECAP1-208ENST00000545807 ZNF622Q969S3 477 aaKnown RBP eCLIP8.45□□□□□ -1.06
NECAP1-208ENST00000545807 HDAC5Q9UQL6 1122 aa8.45□□□□□ -1.06
NECAP1-208ENST00000545807 TMEM131LA2VDJ0 1609 aa8.44□□□□□ -1.06
NECAP1-208ENST00000545807 HDGFP51858 240 aaKnown RBP8.44□□□□□ -1.06
NECAP1-208ENST00000545807 YTHDC2Q9H6S0 1430 aaKnown RBP8.44□□□□□ -1.06
NECAP1-208ENST00000545807 WDR43Q15061 677 aaKnown RBP eCLIP8.44□□□□□ -1.06
NECAP1-208ENST00000545807 AXDND1Q5T1B0 1012 aaPredicted RBP8.44□□□□□ -1.06
NECAP1-208ENST00000545807 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.44□□□□□ -1.06
NECAP1-208ENST00000545807 ADAMTS8Q9UP79 889 aa8.44□□□□□ -1.06
NECAP1-208ENST00000545807 IQGAP1P46940 1657 aa8.44□□□□□ -1.06
NECAP1-208ENST00000545807 GOLGA6L3A6NEY3 463 aa8.43□□□□□ -1.06
NECAP1-208ENST00000545807 OFD1O75665 1012 aa8.43□□□□□ -1.06
NECAP1-208ENST00000545807 KCNA4P22459 653 aa8.43□□□□□ -1.06
NECAP1-208ENST00000545807 CCDC94Q9BW85 323 aaPredicted RBP8.43□□□□□ -1.06
NECAP1-208ENST00000545807 SMG6Q86US8 1419 aaKnown RBP8.43□□□□□ -1.06
NECAP1-208ENST00000545807 NSD3Q9BZ95 1437 aa8.43□□□□□ -1.06
NECAP1-208ENST00000545807 TICAM2Q86XR7 235 aa8.43□□□□□ -1.06
NECAP1-208ENST00000545807 ZC3H13Q5T200 1668 aaKnown RBP8.43□□□□□ -1.06
NECAP1-208ENST00000545807 NRXN1Q9ULB1 1477 aa8.43□□□□□ -1.06
NECAP1-208ENST00000545807 FAM193AP78312 1265 aa8.43□□□□□ -1.06
NECAP1-208ENST00000545807 LAMC1P11047 1609 aa8.42□□□□□ -1.06
NECAP1-208ENST00000545807 ADGRB1O14514 1584 aa8.42□□□□□ -1.06
NECAP1-208ENST00000545807 TMEM2Q9UHN6 1383 aa8.42□□□□□ -1.06
NECAP1-208ENST00000545807 DNTTIP2Q5QJE6 756 aaKnown RBP8.42□□□□□ -1.06
NECAP1-208ENST00000545807 IFT172Q9UG01 1749 aa8.42□□□□□ -1.06
NECAP1-208ENST00000545807 PARD3Q8TEW0 1356 aa8.42□□□□□ -1.06
NECAP1-208ENST00000545807 THEMISQ8N1K5 641 aaPredicted RBP8.42□□□□□ -1.06
NECAP1-208ENST00000545807 PANK2Q9BZ23 570 aa8.42□□□□□ -1.06
NECAP1-208ENST00000545807 PTMAP06454 111 aaKnown RBP8.41□□□□□ -1.06
NECAP1-208ENST00000545807 PMFBP1Q8TBY8 1022 aa8.41□□□□□ -1.06
NECAP1-208ENST00000545807 CDCA7LQ96GN5 454 aa8.41□□□□□ -1.06
NECAP1-208ENST00000545807 YY1AP1Q9H869 796 aa8.41□□□□□ -1.06
NECAP1-208ENST00000545807 ZRANB1Q9UGI0 708 aa8.41□□□□□ -1.06
NECAP1-208ENST00000545807 AMOTL2Q9Y2J4 779 aa8.41□□□□□ -1.06
NECAP1-208ENST00000545807 RRP7AQ9Y3A4 280 aaKnown RBP8.41□□□□□ -1.06
NECAP1-208ENST00000545807 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.4□□□□□ -1.06
NECAP1-208ENST00000545807 FAM13BQ9NYF5 915 aa8.4□□□□□ -1.06
NECAP1-208ENST00000545807 ALKQ9UM73 1620 aa8.4□□□□□ -1.06
NECAP1-208ENST00000545807 ASXL1Q8IXJ9 1541 aa8.4□□□□□ -1.06
NECAP1-208ENST00000545807 MTHFSP49914 203 aa8.4□□□□□ -1.06
NECAP1-208ENST00000545807 BRD4O60885 1362 aaPredicted RBP8.4□□□□□ -1.06
NECAP1-208ENST00000545807 MYCNP04198 464 aaPredicted RBP8.4□□□□□ -1.07
NECAP1-208ENST00000545807 SPATA31D1Q6ZQQ2 1576 aa8.4□□□□□ -1.07
NECAP1-208ENST00000545807 U2SURPO15042 1029 aaKnown RBP8.39□□□□□ -1.07
NECAP1-208ENST00000545807 MRE11P49959 708 aa8.39□□□□□ -1.07
NECAP1-208ENST00000545807 HSPA2P54652 639 aa8.39□□□□□ -1.07
NECAP1-208ENST00000545807 REREQ9P2R6 1566 aa8.39□□□□□ -1.07
NECAP1-208ENST00000545807 DYNC1I1O14576 645 aa8.39□□□□□ -1.07
NECAP1-208ENST00000545807 IRX5P78411 483 aaPredicted RBP8.39□□□□□ -1.07
NECAP1-208ENST00000545807 HDGFL2Q7Z4V5 671 aaPredicted RBP8.39□□□□□ -1.07
NECAP1-208ENST00000545807 DNAJC2Q99543 621 aaKnown RBP8.39□□□□□ -1.07
NECAP1-208ENST00000545807 ARID3AQ99856 593 aa8.39□□□□□ -1.07
NECAP1-208ENST00000545807 TERF2IPQ9NYB0 399 aa8.39□□□□□ -1.07
NECAP1-208ENST00000545807 QRICH2Q9H0J4 1663 aa8.39□□□□□ -1.07
NECAP1-208ENST00000545807 PTPRMP28827 1452 aa8.39□□□□□ -1.07
NECAP1-208ENST00000545807 CGNL1Q0VF96 1302 aa8.39□□□□□ -1.07
NECAP1-208ENST00000545807 NUTM2GQ5VZR2 741 aa8.38□□□□□ -1.07
NECAP1-208ENST00000545807 TMED8Q6PL24 325 aaPredicted RBP8.38□□□□□ -1.07
NECAP1-208ENST00000545807 NUDT16Q96DE0 195 aaKnown RBP8.38□□□□□ -1.07
NECAP1-208ENST00000545807 GEMIN8Q9NWZ8 242 aaKnown RBP8.38□□□□□ -1.07
NECAP1-208ENST00000545807 ISY1Q9ULR0 285 aaKnown RBP8.38□□□□□ -1.07
NECAP1-208ENST00000545807 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.38□□□□□ -1.07
NECAP1-208ENST00000545807 KDM5AP29375 1690 aaKnown RBP8.38□□□□□ -1.07
NECAP1-208ENST00000545807 WASLO00401 505 aaPredicted RBP8.38□□□□□ -1.07
NECAP1-208ENST00000545807 KCNA6P17658 529 aa8.38□□□□□ -1.07
NECAP1-208ENST00000545807 A0A1W2PP64 1363 aa8.38□□□□□ -1.07
NECAP1-208ENST00000545807 APAF1O14727 1248 aa8.38□□□□□ -1.07
NECAP1-208ENST00000545807 ZBTB22O15209 634 aa8.38□□□□□ -1.07
NECAP1-208ENST00000545807 NME9Q86XW9 330 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms