RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 FAM182BQ5T319 152 aa21.95■■□□□ 1.1
RTN3-214ENST00000545432 POGKQ9P215 609 aa21.95■■□□□ 1.1
RTN3-214ENST00000545432 RGPD1P0DJD0 1748 aa21.94■■□□□ 1.1
RTN3-214ENST00000545432 A0A0G2JS52 829 aa21.94■■□□□ 1.1
RTN3-214ENST00000545432 MYT1Q01538 1121 aa21.94■■□□□ 1.1
RTN3-214ENST00000545432 ADGRB1O14514 1584 aa21.94■■□□□ 1.1
RTN3-214ENST00000545432 EIF3AQ14152 1382 aaKnown RBP21.93■■□□□ 1.1
RTN3-214ENST00000545432 EZH2Q15910 746 aaKnown RBP21.93■■□□□ 1.1
RTN3-214ENST00000545432 SPATA31A1Q5TZJ5 1347 aa21.93■■□□□ 1.1
RTN3-214ENST00000545432 WASLO00401 505 aaPredicted RBP21.91■■□□□ 1.1
RTN3-214ENST00000545432 FAM196AQ6ZSG2 479 aa21.91■■□□□ 1.1
RTN3-214ENST00000545432 PARD3Q8TEW0 1356 aa21.9■■□□□ 1.1
RTN3-214ENST00000545432 CRYBG1Q9Y4K1 1723 aa21.9■■□□□ 1.1
RTN3-214ENST00000545432 TULP4Q9NRJ4 1543 aa21.9■■□□□ 1.1
RTN3-214ENST00000545432 TNS1Q9HBL0 1735 aaKnown RBP21.89■■□□□ 1.09
RTN3-214ENST00000545432 PRDM11Q9NQV5 511 aa21.88■■□□□ 1.09
RTN3-214ENST00000545432 HIRIP3Q9BW71 556 aaPredicted RBP21.87■■□□□ 1.09
RTN3-214ENST00000545432 TRAK1Q9UPV9 953 aa21.87■■□□□ 1.09
RTN3-214ENST00000545432 BARGINQ6ZT62 677 aa21.86■■□□□ 1.09
RTN3-214ENST00000545432 MINK1Q8N4C8 1332 aaPredicted RBP21.85■■□□□ 1.09
RTN3-214ENST00000545432 TRIM37O94972 964 aa21.85■■□□□ 1.09
RTN3-214ENST00000545432 NGDNQ8NEJ9 315 aaKnown RBP21.85■■□□□ 1.09
RTN3-214ENST00000545432 STAC3Q96MF2 364 aa21.85■■□□□ 1.09
RTN3-214ENST00000545432 KIAA0232Q92628 1395 aa21.85■■□□□ 1.09
RTN3-214ENST00000545432 APBA3O96018 575 aa21.82■■□□□ 1.08
RTN3-214ENST00000545432 PAK3O75914 559 aaPredicted RBP21.8■■□□□ 1.08
RTN3-214ENST00000545432 CHRNA2Q15822 529 aa21.8■■□□□ 1.08
RTN3-214ENST00000545432 NUDT16Q96DE0 195 aaKnown RBP21.8■■□□□ 1.08
RTN3-214ENST00000545432 ATP7BP35670 1465 aa21.79■■□□□ 1.08
RTN3-214ENST00000545432 POLR3AO14802 1390 aaPredicted RBP21.78■■□□□ 1.08
RTN3-214ENST00000545432 SSH2Q76I76 1423 aa21.77■■□□□ 1.08
RTN3-214ENST00000545432 ZC3H6P61129 1189 aaKnown RBP21.76■■□□□ 1.07
RTN3-214ENST00000545432 STRN4Q9NRL3 753 aa21.76■■□□□ 1.07
RTN3-214ENST00000545432 RREB1Q92766 1687 aa21.75■■□□□ 1.07
RTN3-214ENST00000545432 CPDO75976 1380 aa21.75■■□□□ 1.07
RTN3-214ENST00000545432 PLEKHG3A1L390 1219 aa21.75■■□□□ 1.07
RTN3-214ENST00000545432 PDE3BQ13370 1112 aa21.75■■□□□ 1.07
RTN3-214ENST00000545432 NBPF8Q3BBV2 869 aa21.75■■□□□ 1.07
RTN3-214ENST00000545432 NBPF14Q5TI25 921 aa21.75■■□□□ 1.07
RTN3-214ENST00000545432 THRAP3Q9Y2W1 955 aaKnown RBP21.75■■□□□ 1.07
RTN3-214ENST00000545432 TCP11L2Q8N4U5 519 aa21.74■■□□□ 1.07
RTN3-214ENST00000545432 CAMTA1Q9Y6Y1 1673 aa21.74■■□□□ 1.07
RTN3-214ENST00000545432 C11orf95C9JLR9 678 aaPredicted RBP21.73■■□□□ 1.07
RTN3-214ENST00000545432 YY1P25490 414 aa21.73■■□□□ 1.07
RTN3-214ENST00000545432 DCAF11Q8TEB1 546 aa21.73■■□□□ 1.07
RTN3-214ENST00000545432 USP19O94966 1318 aa21.73■■□□□ 1.07
RTN3-214ENST00000545432 PHRF1Q9P1Y6 1649 aaKnown RBP21.73■■□□□ 1.07
RTN3-214ENST00000545432 LARP1Q6PKG0 1096 aaKnown RBP21.72■■□□□ 1.07
RTN3-214ENST00000545432 CCDC61Q9Y6R9 512 aa21.72■■□□□ 1.07
RTN3-214ENST00000545432 EVA1CP58658 441 aa21.71■■□□□ 1.07
RTN3-214ENST00000545432 CDK19Q9BWU1 502 aa21.71■■□□□ 1.07
RTN3-214ENST00000545432 SPON1Q9HCB6 807 aa21.71■■□□□ 1.07
RTN3-214ENST00000545432 ACEP12821 1306 aa21.71■■□□□ 1.07
RTN3-214ENST00000545432 NUP188Q5SRE5 1749 aa21.7■■□□□ 1.06
RTN3-214ENST00000545432 KCNQ2O43526 872 aa21.7■■□□□ 1.06
RTN3-214ENST00000545432 KDM2AQ9Y2K7 1162 aa21.7■■□□□ 1.06
RTN3-214ENST00000545432 LMO7Q8WWI1 1683 aa21.69■■□□□ 1.06
RTN3-214ENST00000545432 USP35Q9P2H5 1018 aa21.69■■□□□ 1.06
RTN3-214ENST00000545432 PLSCR1O15162 318 aa21.68■■□□□ 1.06
RTN3-214ENST00000545432 NUTM2GQ5VZR2 741 aa21.68■■□□□ 1.06
RTN3-214ENST00000545432 NINLQ9Y2I6 1382 aa21.68■■□□□ 1.06
RTN3-214ENST00000545432 ITSN1Q15811 1721 aa21.67■■□□□ 1.06
RTN3-214ENST00000545432 NRKQ7Z2Y5 1582 aa21.66■■□□□ 1.06
RTN3-214ENST00000545432 GCP02774 474 aa21.66■■□□□ 1.06
RTN3-214ENST00000545432 ABTB2Q8N961 1025 aa21.65■■□□□ 1.06
RTN3-214ENST00000545432 ARHGEF28Q8N1W1 1705 aaKnown RBP21.65■■□□□ 1.06
RTN3-214ENST00000545432 BRD4O60885 1362 aaPredicted RBP21.64■■□□□ 1.06
RTN3-214ENST00000545432 RAB3GAP2Q9H2M9 1393 aa21.64■■□□□ 1.06
RTN3-214ENST00000545432 TOPAZ1Q8N9V7 1692 aa21.63■■□□□ 1.05
RTN3-214ENST00000545432 NLRP13Q86W25 1043 aa21.63■■□□□ 1.05
RTN3-214ENST00000545432 PARP4Q9UKK3 1724 aaKnown RBP21.62■■□□□ 1.05
RTN3-214ENST00000545432 COL5A2P05997 1499 aaPredicted RBP21.62■■□□□ 1.05
RTN3-214ENST00000545432 CRB1P82279 1406 aa21.61■■□□□ 1.05
RTN3-214ENST00000545432 PEAK1Q9H792 1746 aa21.6■■□□□ 1.05
RTN3-214ENST00000545432 BCL9O00512 1426 aa21.6■■□□□ 1.05
RTN3-214ENST00000545432 OVOS2A0A0G2JMS6 1433 aa21.59■■□□□ 1.05
RTN3-214ENST00000545432 OVOS2A0A0J9YW53 1432 aa21.59■■□□□ 1.05
RTN3-214ENST00000545432 OVOS2Q6IE36 1432 aa21.59■■□□□ 1.05
RTN3-214ENST00000545432 PROM2Q8N271 834 aa21.59■■□□□ 1.05
RTN3-214ENST00000545432 PPP1R1BQ9UD71 204 aaPredicted RBP21.59■■□□□ 1.05
RTN3-214ENST00000545432 AATKQ6ZMQ8 1374 aa21.59■■□□□ 1.05
RTN3-214ENST00000545432 BCL11BQ9C0K0 894 aaPredicted RBP21.58■■□□□ 1.05
RTN3-214ENST00000545432 ANO8Q9HCE9 1232 aaPredicted RBP21.58■■□□□ 1.05
RTN3-214ENST00000545432 RGPD3A6NKT7 1758 aaPredicted RBP21.58■■□□□ 1.04
RTN3-214ENST00000545432 RGPD4Q7Z3J3 1758 aa21.58■■□□□ 1.04
RTN3-214ENST00000545432 DCAF8L1A6NGE4 600 aa21.56■■□□□ 1.04
RTN3-214ENST00000545432 PTF1AQ7RTS3 328 aa21.54■■□□□ 1.04
RTN3-214ENST00000545432 PTGER2P43116 358 aa21.53■■□□□ 1.04
RTN3-214ENST00000545432 DDB1Q16531 1140 aa21.53■■□□□ 1.04
RTN3-214ENST00000545432 CASZ1Q86V15 1759 aa21.52■■□□□ 1.04
RTN3-214ENST00000545432 SLIT3O75094 1523 aa21.52■■□□□ 1.04
RTN3-214ENST00000545432 CDCA7Q9BWT1 371 aaPredicted RBP21.52■■□□□ 1.04
RTN3-214ENST00000545432 MARCH10Q8NA82 808 aaPredicted RBP21.51■■□□□ 1.03
RTN3-214ENST00000545432 PDGFDQ9GZP0 370 aaPredicted RBP21.51■■□□□ 1.03
RTN3-214ENST00000545432 PPIP5K1Q6PFW1 1433 aa21.51■■□□□ 1.03
RTN3-214ENST00000545432 SBF2Q86WG5 1849 aa21.5■■□□□ 1.03
RTN3-214ENST00000545432 KIAA1210Q9ULL0 1709 aa21.5■■□□□ 1.03
RTN3-214ENST00000545432 NBPF1Q3BBV0 1214 aa21.5■■□□□ 1.03
RTN3-214ENST00000545432 AXIN2Q9Y2T1 843 aa21.5■■□□□ 1.03
RTN3-214ENST00000545432 USP6P35125 1406 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms