RNA–Protein interactions for RNA: ENST00000544342.1

AL590560.1-203, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene AL590560.1, Length 408 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL590560.1-203ENST00000544342 PRDM11Q9NQV5 511 aa11.86□□□□□ -0.51
AL590560.1-203ENST00000544342 TNS1Q9HBL0 1735 aaKnown RBP11.86□□□□□ -0.51
AL590560.1-203ENST00000544342 SPATA31A5Q5VU36 1347 aa11.86□□□□□ -0.51
AL590560.1-203ENST00000544342 SPATA31A7Q8IWB4 1347 aa11.86□□□□□ -0.51
AL590560.1-203ENST00000544342 THSD7AQ9UPZ6 1657 aa11.85□□□□□ -0.51
AL590560.1-203ENST00000544342 NGDNQ8NEJ9 315 aaKnown RBP11.85□□□□□ -0.51
AL590560.1-203ENST00000544342 CRYBG1Q9Y4K1 1723 aa11.85□□□□□ -0.51
AL590560.1-203ENST00000544342 PARD3Q8TEW0 1356 aa11.84□□□□□ -0.51
AL590560.1-203ENST00000544342 PAK3O75914 559 aaPredicted RBP11.84□□□□□ -0.51
AL590560.1-203ENST00000544342 EN1Q05925 392 aaPredicted RBP11.84□□□□□ -0.51
AL590560.1-203ENST00000544342 STAC3Q96MF2 364 aa11.84□□□□□ -0.51
AL590560.1-203ENST00000544342 FAM196AQ6ZSG2 479 aa11.83□□□□□ -0.52
AL590560.1-203ENST00000544342 TRAK1Q9UPV9 953 aa11.83□□□□□ -0.52
AL590560.1-203ENST00000544342 ADGRB1O14514 1584 aa11.83□□□□□ -0.52
AL590560.1-203ENST00000544342 ATP7BP35670 1465 aa11.83□□□□□ -0.52
AL590560.1-203ENST00000544342 WASLO00401 505 aaPredicted RBP11.82□□□□□ -0.52
AL590560.1-203ENST00000544342 HIRIP3Q9BW71 556 aaPredicted RBP11.82□□□□□ -0.52
AL590560.1-203ENST00000544342 MINK1Q8N4C8 1332 aaPredicted RBP11.82□□□□□ -0.52
AL590560.1-203ENST00000544342 R3HDM1Q15032 1099 aaKnown RBP11.81□□□□□ -0.52
AL590560.1-203ENST00000544342 PHRF1Q9P1Y6 1649 aaKnown RBP11.81□□□□□ -0.52
AL590560.1-203ENST00000544342 SPATA31A1Q5TZJ5 1347 aa11.8□□□□□ -0.52
AL590560.1-203ENST00000544342 ARHGEF28Q8N1W1 1705 aaKnown RBP11.8□□□□□ -0.52
AL590560.1-203ENST00000544342 FAM182BQ5T319 152 aa11.79□□□□□ -0.52
AL590560.1-203ENST00000544342 PRR36Q9H6K5 1346 aa11.79□□□□□ -0.52
AL590560.1-203ENST00000544342 KIAA0232Q92628 1395 aa11.79□□□□□ -0.52
AL590560.1-203ENST00000544342 C11orf95C9JLR9 678 aaPredicted RBP11.78□□□□□ -0.52
AL590560.1-203ENST00000544342 EVA1CP58658 441 aa11.78□□□□□ -0.52
AL590560.1-203ENST00000544342 PDE3BQ13370 1112 aa11.78□□□□□ -0.52
AL590560.1-203ENST00000544342 EZH2Q15910 746 aaKnown RBP11.78□□□□□ -0.52
AL590560.1-203ENST00000544342 NBPF8Q3BBV2 869 aa11.78□□□□□ -0.52
AL590560.1-203ENST00000544342 NBPF14Q5TI25 921 aa11.78□□□□□ -0.52
AL590560.1-203ENST00000544342 STRN4Q9NRL3 753 aa11.78□□□□□ -0.52
AL590560.1-203ENST00000544342 RREB1Q92766 1687 aa11.78□□□□□ -0.52
AL590560.1-203ENST00000544342 DCAF8L1A6NGE4 600 aa11.77□□□□□ -0.53
AL590560.1-203ENST00000544342 TRIM37O94972 964 aa11.77□□□□□ -0.53
AL590560.1-203ENST00000544342 APBA3O96018 575 aa11.77□□□□□ -0.53
AL590560.1-203ENST00000544342 DCAF11Q8TEB1 546 aa11.77□□□□□ -0.53
AL590560.1-203ENST00000544342 CAMKK2Q96RR4 588 aa11.77□□□□□ -0.53
AL590560.1-203ENST00000544342 KDM2AQ9Y2K7 1162 aa11.77□□□□□ -0.53
AL590560.1-203ENST00000544342 BARGINQ6ZT62 677 aa11.76□□□□□ -0.53
AL590560.1-203ENST00000544342 NUDT16Q96DE0 195 aaKnown RBP11.76□□□□□ -0.53
AL590560.1-203ENST00000544342 NUP188Q5SRE5 1749 aa11.75□□□□□ -0.53
AL590560.1-203ENST00000544342 CHRNA2Q15822 529 aa11.75□□□□□ -0.53
AL590560.1-203ENST00000544342 THRAP3Q9Y2W1 955 aaKnown RBP11.75□□□□□ -0.53
AL590560.1-203ENST00000544342 SSH2Q76I76 1423 aa11.75□□□□□ -0.53
AL590560.1-203ENST00000544342 TOPAZ1Q8N9V7 1692 aa11.75□□□□□ -0.53
AL590560.1-203ENST00000544342 ZC3H6P61129 1189 aaKnown RBP11.74□□□□□ -0.53
AL590560.1-203ENST00000544342 USP35Q9P2H5 1018 aa11.74□□□□□ -0.53
AL590560.1-203ENST00000544342 POLR3AO14802 1390 aaPredicted RBP11.74□□□□□ -0.53
AL590560.1-203ENST00000544342 RAB3GAP2Q9H2M9 1393 aa11.74□□□□□ -0.53
AL590560.1-203ENST00000544342 PARP4Q9UKK3 1724 aaKnown RBP11.74□□□□□ -0.53
AL590560.1-203ENST00000544342 RGPD3A6NKT7 1758 aaPredicted RBP11.73□□□□□ -0.53
AL590560.1-203ENST00000544342 CPDO75976 1380 aa11.73□□□□□ -0.53
AL590560.1-203ENST00000544342 NRKQ7Z2Y5 1582 aa11.73□□□□□ -0.53
AL590560.1-203ENST00000544342 RGPD4Q7Z3J3 1758 aa11.73□□□□□ -0.53
AL590560.1-203ENST00000544342 TCP11L2Q8N4U5 519 aa11.73□□□□□ -0.53
AL590560.1-203ENST00000544342 ABTB2Q8N961 1025 aa11.73□□□□□ -0.53
AL590560.1-203ENST00000544342 PPP1R1BQ9UD71 204 aaPredicted RBP11.73□□□□□ -0.53
AL590560.1-203ENST00000544342 KIAA1210Q9ULL0 1709 aa11.73□□□□□ -0.53
AL590560.1-203ENST00000544342 CCDC61Q9Y6R9 512 aa11.73□□□□□ -0.53
AL590560.1-203ENST00000544342 ACEP12821 1306 aa11.72□□□□□ -0.53
AL590560.1-203ENST00000544342 CDK19Q9BWU1 502 aa11.72□□□□□ -0.53
AL590560.1-203ENST00000544342 LMO7Q8WWI1 1683 aa11.71□□□□□ -0.53
AL590560.1-203ENST00000544342 BRD4O60885 1362 aaPredicted RBP11.71□□□□□ -0.53
AL590560.1-203ENST00000544342 PLEKHG3A1L390 1219 aa11.71□□□□□ -0.53
AL590560.1-203ENST00000544342 YY1P25490 414 aa11.71□□□□□ -0.53
AL590560.1-203ENST00000544342 NUTM2GQ5VZR2 741 aa11.71□□□□□ -0.53
AL590560.1-203ENST00000544342 NLRP13Q86W25 1043 aa11.71□□□□□ -0.53
AL590560.1-203ENST00000544342 SPON1Q9HCB6 807 aa11.71□□□□□ -0.53
AL590560.1-203ENST00000544342 NINLQ9Y2I6 1382 aa11.7□□□□□ -0.54
AL590560.1-203ENST00000544342 CAMTA1Q9Y6Y1 1673 aa11.7□□□□□ -0.54
AL590560.1-203ENST00000544342 SBF2Q86WG5 1849 aa11.7□□□□□ -0.54
AL590560.1-203ENST00000544342 OVOS2A0A0G2JMS6 1433 aa11.69□□□□□ -0.54
AL590560.1-203ENST00000544342 OVOS2A0A0J9YW53 1432 aa11.69□□□□□ -0.54
AL590560.1-203ENST00000544342 OVOS2Q6IE36 1432 aa11.69□□□□□ -0.54
AL590560.1-203ENST00000544342 USP19O94966 1318 aa11.69□□□□□ -0.54
AL590560.1-203ENST00000544342 LARP1Q6PKG0 1096 aaKnown RBP11.69□□□□□ -0.54
AL590560.1-203ENST00000544342 KCNQ2O43526 872 aa11.68□□□□□ -0.54
AL590560.1-203ENST00000544342 COL5A2P05997 1499 aaPredicted RBP11.68□□□□□ -0.54
AL590560.1-203ENST00000544342 CRB1P82279 1406 aa11.68□□□□□ -0.54
AL590560.1-203ENST00000544342 AKAP12Q02952 1782 aa11.67□□□□□ -0.54
AL590560.1-203ENST00000544342 GCP02774 474 aa11.67□□□□□ -0.54
AL590560.1-203ENST00000544342 SRPK2P78362 688 aaKnown RBP11.67□□□□□ -0.54
AL590560.1-203ENST00000544342 PLSCR1O15162 318 aa11.66□□□□□ -0.54
AL590560.1-203ENST00000544342 PPIP5K1Q6PFW1 1433 aa11.66□□□□□ -0.54
AL590560.1-203ENST00000544342 WNK3Q9BYP7 1800 aa11.65□□□□□ -0.54
AL590560.1-203ENST00000544342 DDB1Q16531 1140 aa11.65□□□□□ -0.54
AL590560.1-203ENST00000544342 CDCA7Q9BWT1 371 aaPredicted RBP11.65□□□□□ -0.54
AL590560.1-203ENST00000544342 PEAK1Q9H792 1746 aa11.65□□□□□ -0.54
AL590560.1-203ENST00000544342 AATKQ6ZMQ8 1374 aa11.65□□□□□ -0.55
AL590560.1-203ENST00000544342 QRICH2Q9H0J4 1663 aa11.65□□□□□ -0.55
AL590560.1-203ENST00000544342 LRRC37A3O60309 1634 aa11.64□□□□□ -0.55
AL590560.1-203ENST00000544342 CENPJQ9HC77 1338 aaPredicted RBP11.63□□□□□ -0.55
AL590560.1-203ENST00000544342 NLRP6P59044 892 aa11.63□□□□□ -0.55
AL590560.1-203ENST00000544342 TOM1L2Q6ZVM7 507 aa11.63□□□□□ -0.55
AL590560.1-203ENST00000544342 BCL11BQ9C0K0 894 aaPredicted RBP11.63□□□□□ -0.55
AL590560.1-203ENST00000544342 CASZ1Q86V15 1759 aa11.62□□□□□ -0.55
AL590560.1-203ENST00000544342 SLIT3O75094 1523 aa11.62□□□□□ -0.55
AL590560.1-203ENST00000544342 ZBTB7CA1YPR0 619 aa11.62□□□□□ -0.55
AL590560.1-203ENST00000544342 PELP1Q8IZL8 1130 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms