RNA–Protein interactions for RNA: ENST00000543991.1

SMCO2-206, Transcript of single-pass membrane protein with coiled-coil domains 2, humanhuman

TSL 3

Gene SMCO2, Length 486 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2-206ENST00000543991 ZBBXA8MT70 800 aa11.54□□□□□ -0.56
SMCO2-206ENST00000543991 DXOO77932 396 aaKnown RBP11.54□□□□□ -0.56
SMCO2-206ENST00000543991 PDE4CQ08493 712 aa11.54□□□□□ -0.56
SMCO2-206ENST00000543991 THSD4Q6ZMP0 1018 aa11.54□□□□□ -0.56
SMCO2-206ENST00000543991 FAM160A2Q8N612 972 aaPredicted RBP11.54□□□□□ -0.56
SMCO2-206ENST00000543991 SPSB2Q99619 263 aa11.54□□□□□ -0.56
SMCO2-206ENST00000543991 TFIP11Q9UBB9 837 aaKnown RBP11.54□□□□□ -0.56
SMCO2-206ENST00000543991 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.53□□□□□ -0.56
SMCO2-206ENST00000543991 FBXO45P0C2W1 286 aa11.53□□□□□ -0.56
SMCO2-206ENST00000543991 CTHP32929 405 aa11.53□□□□□ -0.56
SMCO2-206ENST00000543991 SRPK2P78362 688 aaKnown RBP11.53□□□□□ -0.56
SMCO2-206ENST00000543991 KCTD17Q8N5Z5 321 aa11.53□□□□□ -0.56
SMCO2-206ENST00000543991 CCNYL3P0C7X3 344 aa11.52□□□□□ -0.57
SMCO2-206ENST00000543991 MMP16P51512 607 aa11.52□□□□□ -0.57
SMCO2-206ENST00000543991 COPS2P61201 443 aa11.52□□□□□ -0.57
SMCO2-206ENST00000543991 EVA1BQ9NVM1 165 aa11.52□□□□□ -0.57
SMCO2-206ENST00000543991 LMOD1P29536 600 aaPredicted RBP11.51□□□□□ -0.57
SMCO2-206ENST00000543991 NYAP1Q6ZVC0 841 aa11.51□□□□□ -0.57
SMCO2-206ENST00000543991 KRTAP3-3Q9BYR6 98 aa11.51□□□□□ -0.57
SMCO2-206ENST00000543991 KRTAP3-2Q9BYR7 98 aa11.51□□□□□ -0.57
SMCO2-206ENST00000543991 ARMC2Q8NEN0 867 aa11.5□□□□□ -0.57
SMCO2-206ENST00000543991 NUDT12Q9BQG2 462 aa11.5□□□□□ -0.57
SMCO2-206ENST00000543991 KCNH2Q12809 1159 aa11.49□□□□□ -0.57
SMCO2-206ENST00000543991 KCTD12Q96CX2 325 aaKnown RBP11.49□□□□□ -0.57
SMCO2-206ENST00000543991 TBC1D9Q6ZT07 1266 aa11.48□□□□□ -0.57
SMCO2-206ENST00000543991 GPKOWQ92917 476 aaPredicted RBP eCLIP11.48□□□□□ -0.57
SMCO2-206ENST00000543991 GPSM3Q9Y4H4 160 aa11.48□□□□□ -0.57
SMCO2-206ENST00000543991 MAFBQ9Y5Q3 323 aaPredicted RBP11.48□□□□□ -0.57
SMCO2-206ENST00000543991 NACADO15069 1562 aa11.48□□□□□ -0.57
SMCO2-206ENST00000543991 ATP9BO43861 1147 aa11.47□□□□□ -0.57
SMCO2-206ENST00000543991 ZPR1O75312 459 aa11.47□□□□□ -0.57
SMCO2-206ENST00000543991 PRDM9Q9NQV7 894 aa11.47□□□□□ -0.57
SMCO2-206ENST00000543991 ADH1BP00325 375 aa11.46□□□□□ -0.57
SMCO2-206ENST00000543991 CSB-PGBD3P0DP91 1061 aa11.46□□□□□ -0.57
SMCO2-206ENST00000543991 PTK2Q05397 1052 aa11.46□□□□□ -0.57
SMCO2-206ENST00000543991 PDXDC2PQ6P474 469 aa11.46□□□□□ -0.57
SMCO2-206ENST00000543991 AEBP1Q8IUX7 1158 aa11.45□□□□□ -0.58
SMCO2-206ENST00000543991 NFATC2IPQ8NCF5 419 aa11.45□□□□□ -0.58
SMCO2-206ENST00000543991 USTQ9Y2C2 406 aa11.45□□□□□ -0.58
SMCO2-206ENST00000543991 NBPF14Q5TI25 921 aa11.44□□□□□ -0.58
SMCO2-206ENST00000543991 ZNF592Q92610 1267 aa11.44□□□□□ -0.58
SMCO2-206ENST00000543991 MTRQ99707 1265 aa11.44□□□□□ -0.58
SMCO2-206ENST00000543991 TLL1O43897 1013 aa11.43□□□□□ -0.58
SMCO2-206ENST00000543991 CECR2Q9BXF3 1484 aa11.43□□□□□ -0.58
SMCO2-206ENST00000543991 ATG7O95352 703 aa11.42□□□□□ -0.58
SMCO2-206ENST00000543991 MCCD1P59942 119 aaPredicted RBP11.42□□□□□ -0.58
SMCO2-206ENST00000543991 POTEMA6NI47 508 aa11.4□□□□□ -0.58
SMCO2-206ENST00000543991 PIK3CDO00329 1044 aa11.4□□□□□ -0.58
SMCO2-206ENST00000543991 CDCA8Q53HL2 280 aa11.4□□□□□ -0.58
SMCO2-206ENST00000543991 TJAP1Q5JTD0 557 aa11.4□□□□□ -0.58
SMCO2-206ENST00000543991 OCSTAMPQ9BR26 566 aa11.4□□□□□ -0.58
SMCO2-206ENST00000543991 VRTNQ9H8Y1 702 aa11.4□□□□□ -0.58
SMCO2-206ENST00000543991 IL21Q9HBE4 155 aa11.4□□□□□ -0.58
SMCO2-206ENST00000543991 MYT1LQ9UL68 1186 aa11.4□□□□□ -0.58
SMCO2-206ENST00000543991 SLC6A16Q9GZN6 736 aa11.39□□□□□ -0.59
SMCO2-206ENST00000543991 UNC93B1Q9H1C4 597 aa11.39□□□□□ -0.59
SMCO2-206ENST00000543991 CEP126Q9P2H0 1117 aa11.39□□□□□ -0.59
SMCO2-206ENST00000543991 SKIP12755 728 aa11.38□□□□□ -0.59
SMCO2-206ENST00000543991 PTPN5P54829 565 aa11.38□□□□□ -0.59
SMCO2-206ENST00000543991 KANK4Q5T7N3 995 aaPredicted RBP11.38□□□□□ -0.59
SMCO2-206ENST00000543991 CCDC24Q8N4L8 307 aa11.38□□□□□ -0.59
SMCO2-206ENST00000543991 PCDHB9Q9Y5E1 797 aa11.38□□□□□ -0.59
SMCO2-206ENST00000543991 PTCRAQ6ISU1 281 aaPredicted RBP11.37□□□□□ -0.59
SMCO2-206ENST00000543991 PLEKHM2Q8IWE5 1019 aa11.37□□□□□ -0.59
SMCO2-206ENST00000543991 ZNF516Q92618 1163 aa11.37□□□□□ -0.59
SMCO2-206ENST00000543991 ARHGAP9Q9BRR9 750 aa11.37□□□□□ -0.59
SMCO2-206ENST00000543991 USP17L3A6NCW0 530 aa11.36□□□□□ -0.59
SMCO2-206ENST00000543991 USP17L4A6NCW7 530 aa11.36□□□□□ -0.59
SMCO2-206ENST00000543991 USP17L2Q6R6M4 530 aa11.36□□□□□ -0.59
SMCO2-206ENST00000543991 USP17L1Q7RTZ2 530 aa11.36□□□□□ -0.59
SMCO2-206ENST00000543991 ADAM32Q8TC27 787 aa11.36□□□□□ -0.59
SMCO2-206ENST00000543991 CCDC9Q9Y3X0 531 aaKnown RBP11.36□□□□□ -0.59
SMCO2-206ENST00000543991 USP17L5A8MUK1 530 aa11.35□□□□□ -0.59
SMCO2-206ENST00000543991 PATL2C9JE40 543 aaKnown RBP11.35□□□□□ -0.59
SMCO2-206ENST00000543991 BRD1O95696 1058 aa11.35□□□□□ -0.59
SMCO2-206ENST00000543991 SLFNL1Q499Z3 407 aa11.35□□□□□ -0.59
SMCO2-206ENST00000543991 SH3BP5LQ7L8J4 393 aa11.35□□□□□ -0.59
SMCO2-206ENST00000543991 FAM174AQ8TBP5 190 aa11.35□□□□□ -0.59
SMCO2-206ENST00000543991 ZBTB33Q86T24 672 aa11.34□□□□□ -0.59
SMCO2-206ENST00000543991 ELOAQ14241 798 aaKnown RBP11.33□□□□□ -0.6
SMCO2-206ENST00000543991 RNF135Q8IUD6 432 aa11.33□□□□□ -0.6
SMCO2-206ENST00000543991 PHTF2Q8N3S3 785 aa11.33□□□□□ -0.6
SMCO2-206ENST00000543991 BICRAQ9NZM4 1560 aa11.33□□□□□ -0.6
SMCO2-206ENST00000543991 TMEM88BA6NKF7 163 aa11.32□□□□□ -0.6
SMCO2-206ENST00000543991 KCNA1Q09470 495 aa11.32□□□□□ -0.6
SMCO2-206ENST00000543991 CARNS1A5YM72 827 aa11.31□□□□□ -0.6
SMCO2-206ENST00000543991 LZTS3O60299 673 aaPredicted RBP11.31□□□□□ -0.6
SMCO2-206ENST00000543991 SH3RF1Q7Z6J0 888 aa11.3□□□□□ -0.6
SMCO2-206ENST00000543991 DZIP3Q86Y13 1208 aaKnown RBP11.3□□□□□ -0.6
SMCO2-206ENST00000543991 DEPDC4Q8N2C3 294 aa11.3□□□□□ -0.6
SMCO2-206ENST00000543991 PLPP7Q8NBV4 271 aa11.3□□□□□ -0.6
SMCO2-206ENST00000543991 CHIC2Q9UKJ5 165 aa11.3□□□□□ -0.6
SMCO2-206ENST00000543991 CC2D2AQ9P2K1 1620 aa11.3□□□□□ -0.6
SMCO2-206ENST00000543991 S1PR4O95977 384 aa11.29□□□□□ -0.6
SMCO2-206ENST00000543991 MAP7D1Q3KQU3 841 aa11.29□□□□□ -0.6
SMCO2-206ENST00000543991 CDAN1Q8IWY9 1227 aa11.29□□□□□ -0.6
SMCO2-206ENST00000543991 NKX2-3Q8TAU0 364 aa11.29□□□□□ -0.6
SMCO2-206ENST00000543991 BAP1Q92560 729 aa11.29□□□□□ -0.6
SMCO2-206ENST00000543991 MKRN1Q9UHC7 482 aaKnown RBP11.29□□□□□ -0.6
SMCO2-206ENST00000543991 BPHLQ86WA6 291 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms