RNA–Protein interactions for RNA: ENST00000543938.5

AP3B2-210, Transcript of adaptor related protein complex 3 subunit beta 2, humanhuman

TSL 2

Gene AP3B2, Length 2,650 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B2-210ENST00000543938 PDE3BQ13370 1112 aa15.55■□□□□ 0.08
AP3B2-210ENST00000543938 C20orf194Q5TEA3 1177 aa15.55■□□□□ 0.08
AP3B2-210ENST00000543938 NEO1Q92859 1461 aa15.55■□□□□ 0.08
AP3B2-210ENST00000543938 KIF1CO43896 1103 aaKnown RBP15.54■□□□□ 0.08
AP3B2-210ENST00000543938 ARAP3Q8WWN8 1544 aa15.54■□□□□ 0.08
AP3B2-210ENST00000543938 PNISRQ8TF01 805 aaKnown RBP15.54■□□□□ 0.08
AP3B2-210ENST00000543938 RASSF4Q9H2L5 321 aa15.54■□□□□ 0.08
AP3B2-210ENST00000543938 RAD51AP2Q09MP3 1159 aa15.53■□□□□ 0.08
AP3B2-210ENST00000543938 SGSM3Q96HU1 749 aa15.53■□□□□ 0.08
AP3B2-210ENST00000543938 TBC1D32Q96NH3 1257 aa15.53■□□□□ 0.08
AP3B2-210ENST00000543938 MORC2Q9Y6X9 1032 aaPredicted RBP15.53■□□□□ 0.08
AP3B2-210ENST00000543938 ZNF692Q9BU19 519 aaPredicted RBP15.53■□□□□ 0.08
AP3B2-210ENST00000543938 DDX41Q9UJV9 622 aaKnown RBP15.53■□□□□ 0.08
AP3B2-210ENST00000543938 PLCH2O75038 1416 aa15.53■□□□□ 0.08
AP3B2-210ENST00000543938 CFAP65Q6ZU64 1925 aaKnown RBP15.53■□□□□ 0.08
AP3B2-210ENST00000543938 GBP4Q96PP9 640 aa15.52■□□□□ 0.08
AP3B2-210ENST00000543938 NBPF10Q6P3W6 841 aaKnown RBP15.52■□□□□ 0.07
AP3B2-210ENST00000543938 TIAM1Q13009 1591 aa15.52■□□□□ 0.07
AP3B2-210ENST00000543938 CFAP74Q9C0B2 1584 aa15.52■□□□□ 0.07
AP3B2-210ENST00000543938 TRERF1Q96PN7 1200 aa15.51■□□□□ 0.07
AP3B2-210ENST00000543938 MYO5CQ9NQX4 1742 aa15.51■□□□□ 0.07
AP3B2-210ENST00000543938 ZNF445P59923 1031 aa15.51■□□□□ 0.07
AP3B2-210ENST00000543938 EHBP1L1Q8N3D4 1523 aa15.51■□□□□ 0.07
AP3B2-210ENST00000543938 PLIN1O60240 522 aa15.51■□□□□ 0.07
AP3B2-210ENST00000543938 EIF4G2P78344 907 aaKnown RBP eCLIP15.51■□□□□ 0.07
AP3B2-210ENST00000543938 RBM28Q9NW13 759 aaKnown RBP15.51■□□□□ 0.07
AP3B2-210ENST00000543938 CTNNA3Q9UI47 895 aa15.51■□□□□ 0.07
AP3B2-210ENST00000543938 MTUS2Q5JR59 1369 aa15.5■□□□□ 0.07
AP3B2-210ENST00000543938 FAM177BA6PVY3 158 aa15.5■□□□□ 0.07
AP3B2-210ENST00000543938 SPRYD3Q8NCJ5 442 aa15.5■□□□□ 0.07
AP3B2-210ENST00000543938 COL17A1Q9UMD9 1497 aaPredicted RBP15.5■□□□□ 0.07
AP3B2-210ENST00000543938 ERICH4A6NGS2 130 aa15.5■□□□□ 0.07
AP3B2-210ENST00000543938 HNRNPH2P55795 449 aaKnown RBP15.49■□□□□ 0.07
AP3B2-210ENST00000543938 MNS1Q8NEH6 495 aa15.49■□□□□ 0.07
AP3B2-210ENST00000543938 MED4Q9NPJ6 270 aa15.49■□□□□ 0.07
AP3B2-210ENST00000543938 FANCAO15360 1455 aa15.49■□□□□ 0.07
AP3B2-210ENST00000543938 MAFGO15525 162 aa15.49■□□□□ 0.07
AP3B2-210ENST00000543938 DDIT3P35638 169 aa15.49■□□□□ 0.07
AP3B2-210ENST00000543938 CC2D2BQ6DHV5 1058 aa15.49■□□□□ 0.07
AP3B2-210ENST00000543938 CTIFO43310 598 aaKnown RBP15.48■□□□□ 0.07
AP3B2-210ENST00000543938 ZNF853P0CG23 659 aa15.48■□□□□ 0.07
AP3B2-210ENST00000543938 CDCA8Q53HL2 280 aa15.48■□□□□ 0.07
AP3B2-210ENST00000543938 LRPPRCP42704 1394 aaKnown RBP15.48■□□□□ 0.07
AP3B2-210ENST00000543938 TDO2P48775 406 aa15.48■□□□□ 0.07
AP3B2-210ENST00000543938 BSDC1Q9NW68 430 aaPredicted RBP15.48■□□□□ 0.07
AP3B2-210ENST00000543938 CCDC144AA2RUR9 1427 aa15.47■□□□□ 0.07
AP3B2-210ENST00000543938 TNPO1Q92973 898 aaKnown RBP15.47■□□□□ 0.07
AP3B2-210ENST00000543938 TMX1Q9H3N1 280 aa15.47■□□□□ 0.07
AP3B2-210ENST00000543938 CCDC189A1A4V9 331 aa15.47■□□□□ 0.07
AP3B2-210ENST00000543938 SSR1P43307 286 aaKnown RBP15.47■□□□□ 0.07
AP3B2-210ENST00000543938 PIBF1Q8WXW3 757 aa15.46■□□□□ 0.07
AP3B2-210ENST00000543938 PREX2Q70Z35 1606 aa15.46■□□□□ 0.07
AP3B2-210ENST00000543938 CASQ1P31415 396 aa15.46■□□□□ 0.07
AP3B2-210ENST00000543938 ZKSCAN8Q15776 578 aaPredicted RBP15.46■□□□□ 0.07
AP3B2-210ENST00000543938 KLHL40Q2TBA0 621 aa15.46■□□□□ 0.07
AP3B2-210ENST00000543938 EFCAB2Q5VUJ9 269 aa15.46■□□□□ 0.07
AP3B2-210ENST00000543938 TERF2IPQ9NYB0 399 aa15.46■□□□□ 0.07
AP3B2-210ENST00000543938 LRRC9Q6ZRR7 1453 aa15.45■□□□□ 0.06
AP3B2-210ENST00000543938 OTUD6BQ8N6M0 293 aa15.45■□□□□ 0.06
AP3B2-210ENST00000543938 KIAA1107Q9UPP5 1409 aa15.45■□□□□ 0.06
AP3B2-210ENST00000543938 NCOA3Q9Y6Q9 1424 aa15.45■□□□□ 0.06
AP3B2-210ENST00000543938 CDC42BPBQ9Y5S2 1711 aa15.45■□□□□ 0.06
AP3B2-210ENST00000543938 CIZ1Q9ULV3 898 aaPredicted RBP15.45■□□□□ 0.06
AP3B2-210ENST00000543938 CDC42BPAQ5VT25 1732 aa15.44■□□□□ 0.06
AP3B2-210ENST00000543938 CYP2C19P33261 490 aa15.44■□□□□ 0.06
AP3B2-210ENST00000543938 SYCP1Q15431 976 aa15.44■□□□□ 0.06
AP3B2-210ENST00000543938 KRT222Q8N1A0 295 aa15.44■□□□□ 0.06
AP3B2-210ENST00000543938 NOLC1Q14978 699 aaKnown RBP eCLIP15.44■□□□□ 0.06
AP3B2-210ENST00000543938 RGL3Q3MIN7 710 aa15.44■□□□□ 0.06
AP3B2-210ENST00000543938 NBPF6Q5VWK0 638 aa15.44■□□□□ 0.06
AP3B2-210ENST00000543938 NBPF5PQ86XG9 351 aaPredicted RBP15.44■□□□□ 0.06
AP3B2-210ENST00000543938 NBPF4Q96M43 638 aa15.44■□□□□ 0.06
AP3B2-210ENST00000543938 RBSNQ9H1K0 784 aa15.44■□□□□ 0.06
AP3B2-210ENST00000543938 SUFUQ9UMX1 484 aa15.44■□□□□ 0.06
AP3B2-210ENST00000543938 GPATCH8Q9UKJ3 1502 aaKnown RBP15.43■□□□□ 0.06
AP3B2-210ENST00000543938 NPC1L1Q9UHC9 1359 aa15.43■□□□□ 0.06
AP3B2-210ENST00000543938 FKBP5Q13451 457 aaPredicted RBP15.43■□□□□ 0.06
AP3B2-210ENST00000543938 DNAJC21Q5F1R6 531 aaKnown RBP15.43■□□□□ 0.06
AP3B2-210ENST00000543938 CXorf56Q9H5V9 222 aa15.43■□□□□ 0.06
AP3B2-210ENST00000543938 DIAPH3Q9NSV4 1193 aa15.43■□□□□ 0.06
AP3B2-210ENST00000543938 SUPT6HQ7KZ85 1726 aaKnown RBP15.43■□□□□ 0.06
AP3B2-210ENST00000543938 ARHGAP5Q13017 1502 aa15.43■□□□□ 0.06
AP3B2-210ENST00000543938 SENP3-EIF4A1A0A087X0R7 540 aa15.43■□□□□ 0.06
AP3B2-210ENST00000543938 ZNF526Q8TF50 670 aaPredicted RBP15.43■□□□□ 0.06
AP3B2-210ENST00000543938 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.42■□□□□ 0.06
AP3B2-210ENST00000543938 BORCS6Q96GS4 357 aa15.42■□□□□ 0.06
AP3B2-210ENST00000543938 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.42■□□□□ 0.06
AP3B2-210ENST00000543938 MAPK8IP3Q9UPT6 1336 aa15.42■□□□□ 0.06
AP3B2-210ENST00000543938 GOLGA6L6A8MZA4 724 aa15.41■□□□□ 0.06
AP3B2-210ENST00000543938 REC8O95072 547 aa15.41■□□□□ 0.06
AP3B2-210ENST00000543938 RAB3GAP1Q15042 981 aa15.41■□□□□ 0.06
AP3B2-210ENST00000543938 SPTLC3Q9NUV7 552 aa15.41■□□□□ 0.06
AP3B2-210ENST00000543938 GSCP56915 257 aaPredicted RBP15.41■□□□□ 0.06
AP3B2-210ENST00000543938 TOMM22Q9NS69 142 aa15.41■□□□□ 0.06
AP3B2-210ENST00000543938 DENND4BO75064 1496 aaPredicted RBP15.41■□□□□ 0.06
AP3B2-210ENST00000543938 ADGRL1O94910 1474 aa15.4■□□□□ 0.06
AP3B2-210ENST00000543938 JRKLQ9Y4A0 524 aa15.4■□□□□ 0.06
AP3B2-210ENST00000543938 PPP1R12AO14974 1030 aaPredicted RBP15.4■□□□□ 0.06
AP3B2-210ENST00000543938 MUM1L1Q5H9M0 696 aa15.4■□□□□ 0.06
AP3B2-210ENST00000543938 KIF18AQ8NI77 898 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms