RNA–Protein interactions for RNA: ENST00000543772.2

PSMC1-202, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

TSL 2 BASIC

Gene PSMC1, Length 1,389 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-202ENST00000543772 SLAIN2Q9P270 581 aa12.15□□□□□ -0.46
PSMC1-202ENST00000543772 MYO5BQ9ULV0 1848 aa12.15□□□□□ -0.46
PSMC1-202ENST00000543772 JCADQ9P266 1359 aa12.14□□□□□ -0.47
PSMC1-202ENST00000543772 PLEKHG1Q9ULL1 1385 aa12.14□□□□□ -0.47
PSMC1-202ENST00000543772 G3V3G9 751 aa12.14□□□□□ -0.47
PSMC1-202ENST00000543772 NEUROD1Q13562 356 aa12.14□□□□□ -0.47
PSMC1-202ENST00000543772 MFRPQ9BY79 579 aa12.14□□□□□ -0.47
PSMC1-202ENST00000543772 RIMS2Q9UQ26 1411 aa12.14□□□□□ -0.47
PSMC1-202ENST00000543772 COL16A1Q07092 1604 aaPredicted RBP12.14□□□□□ -0.47
PSMC1-202ENST00000543772 CHD2O14647 1828 aaKnown RBP12.13□□□□□ -0.47
PSMC1-202ENST00000543772 NLRP6P59044 892 aa12.13□□□□□ -0.47
PSMC1-202ENST00000543772 TMEM131LA2VDJ0 1609 aa12.12□□□□□ -0.47
PSMC1-202ENST00000543772 MARVELD3Q96A59 401 aa12.12□□□□□ -0.47
PSMC1-202ENST00000543772 LRP6O75581 1613 aa12.11□□□□□ -0.47
PSMC1-202ENST00000543772 PPP1R15AO75807 674 aaPredicted RBP12.11□□□□□ -0.47
PSMC1-202ENST00000543772 TRPM2O94759 1503 aa12.09□□□□□ -0.47
PSMC1-202ENST00000543772 L3MBTL2Q969R5 705 aa12.09□□□□□ -0.47
PSMC1-202ENST00000543772 SPATA31E1Q6ZUB1 1445 aa12.09□□□□□ -0.47
PSMC1-202ENST00000543772 ADAMTS13Q76LX8 1427 aa12.09□□□□□ -0.47
PSMC1-202ENST00000543772 NUTM2DQ5VT03 806 aaPredicted RBP12.08□□□□□ -0.48
PSMC1-202ENST00000543772 TMEM92Q6UXU6 159 aa12.08□□□□□ -0.48
PSMC1-202ENST00000543772 C14orf37Q86TY3 774 aa12.08□□□□□ -0.48
PSMC1-202ENST00000543772 TIMELESSQ9UNS1 1208 aa12.08□□□□□ -0.48
PSMC1-202ENST00000543772 TBX22Q9Y458 520 aa12.08□□□□□ -0.48
PSMC1-202ENST00000543772 CCDC144AA2RUR9 1427 aa12.08□□□□□ -0.48
PSMC1-202ENST00000543772 NCOA3Q9Y6Q9 1424 aa12.08□□□□□ -0.48
PSMC1-202ENST00000543772 AHDC1Q5TGY3 1603 aaPredicted RBP12.08□□□□□ -0.48
PSMC1-202ENST00000543772 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.08□□□□□ -0.48
PSMC1-202ENST00000543772 CHGAP10645 457 aaKnown RBP12.07□□□□□ -0.48
PSMC1-202ENST00000543772 HOXB3P14651 431 aaPredicted RBP12.06□□□□□ -0.48
PSMC1-202ENST00000543772 HDGFP51858 240 aaKnown RBP12.06□□□□□ -0.48
PSMC1-202ENST00000543772 RGL3Q3MIN7 710 aa12.06□□□□□ -0.48
PSMC1-202ENST00000543772 SPATA31A6Q5VVP1 1343 aa12.06□□□□□ -0.48
PSMC1-202ENST00000543772 DIP2AQ14689 1571 aa12.06□□□□□ -0.48
PSMC1-202ENST00000543772 CLTCL1P53675 1640 aa12.06□□□□□ -0.48
PSMC1-202ENST00000543772 SHPRHQ149N8 1683 aa12.06□□□□□ -0.48
PSMC1-202ENST00000543772 SPHKAPQ2M3C7 1700 aa12.06□□□□□ -0.48
PSMC1-202ENST00000543772 MEX3CQ5U5Q3 659 aaKnown RBP12.05□□□□□ -0.48
PSMC1-202ENST00000543772 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.05□□□□□ -0.48
PSMC1-202ENST00000543772 CADPS2Q86UW7 1296 aa12.05□□□□□ -0.48
PSMC1-202ENST00000543772 PTPRUQ92729 1446 aa12.04□□□□□ -0.48
PSMC1-202ENST00000543772 PIK3R4Q99570 1358 aa12.04□□□□□ -0.48
PSMC1-202ENST00000543772 ATF3P18847 181 aa12.04□□□□□ -0.48
PSMC1-202ENST00000543772 ZNF772Q68DY9 489 aaPredicted RBP12.04□□□□□ -0.48
PSMC1-202ENST00000543772 C19orf44Q9H6X5 657 aa12.04□□□□□ -0.48
PSMC1-202ENST00000543772 ZEB1P37275 1124 aaPredicted RBP12.03□□□□□ -0.48
PSMC1-202ENST00000543772 BRINP3Q76B58 766 aa12.03□□□□□ -0.48
PSMC1-202ENST00000543772 HS6ST3Q8IZP7 471 aa12.03□□□□□ -0.48
PSMC1-202ENST00000543772 UPF1Q92900 1129 aaKnown RBP eCLIP12.03□□□□□ -0.48
PSMC1-202ENST00000543772 NBPF8Q3BBV2 869 aa12.02□□□□□ -0.49
PSMC1-202ENST00000543772 NUTM2BA6NNL0 878 aaPredicted RBP12.01□□□□□ -0.49
PSMC1-202ENST00000543772 NUTM2EB1AL46 878 aaPredicted RBP12.01□□□□□ -0.49
PSMC1-202ENST00000543772 NUTM2AQ8IVF1 878 aaPredicted RBP12.01□□□□□ -0.49
PSMC1-202ENST00000543772 DCAF11Q8TEB1 546 aa12.01□□□□□ -0.49
PSMC1-202ENST00000543772 AMOTL2Q9Y2J4 779 aa12.01□□□□□ -0.49
PSMC1-202ENST00000543772 RPGRIP1LQ68CZ1 1315 aa12□□□□□ -0.49
PSMC1-202ENST00000543772 ASXL1Q8IXJ9 1541 aa12□□□□□ -0.49
PSMC1-202ENST00000543772 XRN1Q8IZH2 1706 aaKnown RBP12□□□□□ -0.49
PSMC1-202ENST00000543772 EMP3P54852 163 aa12□□□□□ -0.49
PSMC1-202ENST00000543772 NRXN3Q9Y4C0 1643 aa12□□□□□ -0.49
PSMC1-202ENST00000543772 TONSLQ96HA7 1378 aa11.99□□□□□ -0.49
PSMC1-202ENST00000543772 RXRBP28702 533 aa11.99□□□□□ -0.49
PSMC1-202ENST00000543772 KDM2AQ9Y2K7 1162 aa11.99□□□□□ -0.49
PSMC1-202ENST00000543772 DCCP43146 1447 aa11.99□□□□□ -0.49
PSMC1-202ENST00000543772 MST1RQ04912 1400 aa11.98□□□□□ -0.49
PSMC1-202ENST00000543772 STAC3Q96MF2 364 aa11.98□□□□□ -0.49
PSMC1-202ENST00000543772 NHSL1Q5SYE7 1610 aa11.98□□□□□ -0.49
PSMC1-202ENST00000543772 CDK12Q9NYV4 1490 aaPredicted RBP11.98□□□□□ -0.49
PSMC1-202ENST00000543772 AFF2P51816 1311 aa11.97□□□□□ -0.49
PSMC1-202ENST00000543772 ADGRF5Q8IZF2 1346 aa11.97□□□□□ -0.49
PSMC1-202ENST00000543772 SETBP1Q9Y6X0 1596 aa11.97□□□□□ -0.49
PSMC1-202ENST00000543772 ZNF326Q5BKZ1 582 aaKnown RBP11.97□□□□□ -0.49
PSMC1-202ENST00000543772 METP08581 1390 aa11.95□□□□□ -0.5
PSMC1-202ENST00000543772 DOK7Q18PE1 504 aa11.94□□□□□ -0.5
PSMC1-202ENST00000543772 DDX17Q92841 729 aaKnown RBP11.94□□□□□ -0.5
PSMC1-202ENST00000543772 NEXMIFQ5QGS0 1516 aa11.94□□□□□ -0.5
PSMC1-202ENST00000543772 RGS12O14924 1447 aa11.94□□□□□ -0.5
PSMC1-202ENST00000543772 ADGRL3Q9HAR2 1447 aa11.94□□□□□ -0.5
PSMC1-202ENST00000543772 NRXN1Q9ULB1 1477 aa11.93□□□□□ -0.5
PSMC1-202ENST00000543772 PNPLA6Q8IY17 1366 aa11.93□□□□□ -0.5
PSMC1-202ENST00000543772 KIF3CO14782 793 aa11.93□□□□□ -0.5
PSMC1-202ENST00000543772 C8orf37Q96NL8 207 aa11.93□□□□□ -0.5
PSMC1-202ENST00000543772 KRTAP3-3Q9BYR6 98 aa11.93□□□□□ -0.5
PSMC1-202ENST00000543772 KRTAP3-2Q9BYR7 98 aa11.93□□□□□ -0.5
PSMC1-202ENST00000543772 KIF1BO60333 1816 aa11.93□□□□□ -0.5
PSMC1-202ENST00000543772 NALCNQ8IZF0 1738 aa11.93□□□□□ -0.5
PSMC1-202ENST00000543772 PRAG1Q86YV5 1406 aa11.93□□□□□ -0.5
PSMC1-202ENST00000543772 HOXB1P14653 301 aaPredicted RBP11.92□□□□□ -0.5
PSMC1-202ENST00000543772 NBPF1Q3BBV0 1214 aa11.92□□□□□ -0.5
PSMC1-202ENST00000543772 LRRC59Q96AG4 307 aaKnown RBP11.92□□□□□ -0.5
PSMC1-202ENST00000543772 HS3ST6Q96QI5 342 aa11.92□□□□□ -0.5
PSMC1-202ENST00000543772 C14orf93Q9H972 538 aaKnown RBP11.92□□□□□ -0.5
PSMC1-202ENST00000543772 PPP1R37O75864 691 aa11.92□□□□□ -0.5
PSMC1-202ENST00000543772 MYOM2P54296 1465 aa11.91□□□□□ -0.5
PSMC1-202ENST00000543772 CFAP70Q5T0N1 1121 aa11.91□□□□□ -0.5
PSMC1-202ENST00000543772 POTEB3A0JP26 581 aa11.9□□□□□ -0.5
PSMC1-202ENST00000543772 FAM205CA6NFA0 338 aa11.9□□□□□ -0.5
PSMC1-202ENST00000543772 RBM6P78332 1123 aaKnown RBP11.9□□□□□ -0.5
PSMC1-202ENST00000543772 POTEBQ6S5H4 581 aa11.9□□□□□ -0.5
PSMC1-202ENST00000543772 QTRT2Q9H974 415 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms