RNA–Protein interactions for RNA: ENST00000543585.1

SCNN1A-220, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-220ENST00000543585 BCL9LQ86UU0 1499 aa22.52■■□□□ 1.2
SCNN1A-220ENST00000543585 SBNO2Q9Y2G9 1366 aa22.51■■□□□ 1.19
SCNN1A-220ENST00000543585 EVC2Q86UK5 1308 aa22.51■■□□□ 1.19
SCNN1A-220ENST00000543585 SLIT2O94813 1529 aa22.5■■□□□ 1.19
SCNN1A-220ENST00000543585 ATRNO75882 1429 aa22.49■■□□□ 1.19
SCNN1A-220ENST00000543585 NRAPQ86VF7 1730 aa22.49■■□□□ 1.19
SCNN1A-220ENST00000543585 QTRT2Q9H974 415 aaKnown RBP22.49■■□□□ 1.19
SCNN1A-220ENST00000543585 USP21Q9UK80 565 aa22.49■■□□□ 1.19
SCNN1A-220ENST00000543585 PAK3O75914 559 aaPredicted RBP22.48■■□□□ 1.19
SCNN1A-220ENST00000543585 RXRBP28702 533 aa22.47■■□□□ 1.19
SCNN1A-220ENST00000543585 CABP1Q9NZU7 370 aa22.47■■□□□ 1.19
SCNN1A-220ENST00000543585 MON2Q7Z3U7 1717 aa22.47■■□□□ 1.19
SCNN1A-220ENST00000543585 CDK12Q9NYV4 1490 aaPredicted RBP22.47■■□□□ 1.19
SCNN1A-220ENST00000543585 NRKQ7Z2Y5 1582 aa22.46■■□□□ 1.19
SCNN1A-220ENST00000543585 PIK3C2AO00443 1686 aa22.46■■□□□ 1.19
SCNN1A-220ENST00000543585 COL14A1Q05707 1796 aaKnown RBP22.45■■□□□ 1.19
SCNN1A-220ENST00000543585 RGS12O14924 1447 aa22.45■■□□□ 1.18
SCNN1A-220ENST00000543585 USP6P35125 1406 aa22.44■■□□□ 1.18
SCNN1A-220ENST00000543585 GLI3P10071 1580 aa22.43■■□□□ 1.18
SCNN1A-220ENST00000543585 SSH2Q76I76 1423 aa22.43■■□□□ 1.18
SCNN1A-220ENST00000543585 HAP1P54257 671 aaPredicted RBP22.43■■□□□ 1.18
SCNN1A-220ENST00000543585 RBM6P78332 1123 aaKnown RBP22.43■■□□□ 1.18
SCNN1A-220ENST00000543585 FAM83GA6ND36 823 aa22.42■■□□□ 1.18
SCNN1A-220ENST00000543585 NUTM2GQ5VZR2 741 aa22.42■■□□□ 1.18
SCNN1A-220ENST00000543585 TESK2Q96S53 571 aa22.42■■□□□ 1.18
SCNN1A-220ENST00000543585 TRPC5Q9UL62 973 aaPredicted RBP22.42■■□□□ 1.18
SCNN1A-220ENST00000543585 BRWD3Q6RI45 1802 aa22.41■■□□□ 1.18
SCNN1A-220ENST00000543585 TIMELESSQ9UNS1 1208 aa22.41■■□□□ 1.18
SCNN1A-220ENST00000543585 ATAD2Q6PL18 1390 aa22.4■■□□□ 1.18
SCNN1A-220ENST00000543585 ST20-MTHFSA0A0A6YYL1 179 aa22.4■■□□□ 1.18
SCNN1A-220ENST00000543585 CCER1Q8TC90 406 aaPredicted RBP22.4■■□□□ 1.18
SCNN1A-220ENST00000543585 CD163L1Q9NR16 1453 aa22.4■■□□□ 1.18
SCNN1A-220ENST00000543585 UNC5CLQ8IV45 518 aa22.39■■□□□ 1.17
SCNN1A-220ENST00000543585 CPSF1Q10570 1443 aaKnown RBP22.39■■□□□ 1.17
SCNN1A-220ENST00000543585 USP47Q96K76 1375 aa22.38■■□□□ 1.17
SCNN1A-220ENST00000543585 BRD4O60885 1362 aaPredicted RBP22.37■■□□□ 1.17
SCNN1A-220ENST00000543585 USP19O94966 1318 aa22.36■■□□□ 1.17
SCNN1A-220ENST00000543585 ABTB2Q8N961 1025 aa22.36■■□□□ 1.17
SCNN1A-220ENST00000543585 LMO7Q8WWI1 1683 aa22.35■■□□□ 1.17
SCNN1A-220ENST00000543585 KIAA0232Q92628 1395 aa22.35■■□□□ 1.17
SCNN1A-220ENST00000543585 GJD4Q96KN9 370 aaPredicted RBP22.34■■□□□ 1.17
SCNN1A-220ENST00000543585 SLIT3O75094 1523 aa22.34■■□□□ 1.17
SCNN1A-220ENST00000543585 USP54Q70EL1 1684 aa22.33■■□□□ 1.17
SCNN1A-220ENST00000543585 RGPD5Q99666 1765 aa22.33■■□□□ 1.17
SCNN1A-220ENST00000543585 COL18A1P39060 1754 aa22.32■■□□□ 1.16
SCNN1A-220ENST00000543585 EP400Q96L91 3159 aa22.32■■□□□ 1.16
SCNN1A-220ENST00000543585 TTC21BQ7Z4L5 1316 aa22.31■■□□□ 1.16
SCNN1A-220ENST00000543585 SLC12A5Q9H2X9 1139 aa22.31■■□□□ 1.16
SCNN1A-220ENST00000543585 BTG4Q9NY30 223 aa22.31■■□□□ 1.16
SCNN1A-220ENST00000543585 KTN1Q86UP2 1357 aaKnown RBP22.3■■□□□ 1.16
SCNN1A-220ENST00000543585 ZC3H6P61129 1189 aaKnown RBP22.3■■□□□ 1.16
SCNN1A-220ENST00000543585 CHRNA2Q15822 529 aa22.3■■□□□ 1.16
SCNN1A-220ENST00000543585 VPS72Q15906 364 aa22.3■■□□□ 1.16
SCNN1A-220ENST00000543585 ZNF692Q9BU19 519 aaPredicted RBP22.3■■□□□ 1.16
SCNN1A-220ENST00000543585 PRDM11Q9NQV5 511 aa22.3■■□□□ 1.16
SCNN1A-220ENST00000543585 MYOM1P52179 1685 aa22.3■■□□□ 1.16
SCNN1A-220ENST00000543585 PUS7Q96PZ0 661 aaKnown RBP22.29■■□□□ 1.16
SCNN1A-220ENST00000543585 CAMTA1Q9Y6Y1 1673 aa22.29■■□□□ 1.16
SCNN1A-220ENST00000543585 NLRP13Q86W25 1043 aa22.28■■□□□ 1.16
SCNN1A-220ENST00000543585 CPDO75976 1380 aa22.27■■□□□ 1.16
SCNN1A-220ENST00000543585 GCP02774 474 aa22.27■■□□□ 1.16
SCNN1A-220ENST00000543585 NLRP6P59044 892 aa22.27■■□□□ 1.16
SCNN1A-220ENST00000543585 TMC1Q8TDI8 760 aa22.27■■□□□ 1.16
SCNN1A-220ENST00000543585 A0A1W2PP64 1363 aa22.26■■□□□ 1.15
SCNN1A-220ENST00000543585 UPF1Q92900 1129 aaKnown RBP eCLIP22.25■■□□□ 1.15
SCNN1A-220ENST00000543585 ZRANB1Q9UGI0 708 aa22.25■■□□□ 1.15
SCNN1A-220ENST00000543585 NFAT5O94916 1531 aa22.25■■□□□ 1.15
SCNN1A-220ENST00000543585 TTC21AQ8NDW8 1320 aa22.25■■□□□ 1.15
SCNN1A-220ENST00000543585 LTN1O94822 1766 aa22.25■■□□□ 1.15
SCNN1A-220ENST00000543585 THSD7AQ9UPZ6 1657 aa22.23■■□□□ 1.15
SCNN1A-220ENST00000543585 CCDC9Q9Y3X0 531 aaKnown RBP22.22■■□□□ 1.15
SCNN1A-220ENST00000543585 EDC4Q6P2E9 1401 aaKnown RBP22.22■■□□□ 1.15
SCNN1A-220ENST00000543585 TMF1P82094 1093 aa22.21■■□□□ 1.15
SCNN1A-220ENST00000543585 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.21■■□□□ 1.15
SCNN1A-220ENST00000543585 SPATA31A5Q5VU36 1347 aa22.21■■□□□ 1.15
SCNN1A-220ENST00000543585 SPATA31A7Q8IWB4 1347 aa22.21■■□□□ 1.15
SCNN1A-220ENST00000543585 NINLQ9Y2I6 1382 aa22.21■■□□□ 1.15
SCNN1A-220ENST00000543585 ONECUT3O60422 494 aaPredicted RBP22.2■■□□□ 1.14
SCNN1A-220ENST00000543585 NME9Q86XW9 330 aa22.2■■□□□ 1.14
SCNN1A-220ENST00000543585 USP31Q70CQ4 1352 aa22.2■■□□□ 1.14
SCNN1A-220ENST00000543585 HDGFL2Q7Z4V5 671 aaPredicted RBP22.19■■□□□ 1.14
SCNN1A-220ENST00000543585 COL5A2P05997 1499 aaPredicted RBP22.18■■□□□ 1.14
SCNN1A-220ENST00000543585 SLC24A1O60721 1099 aa22.18■■□□□ 1.14
SCNN1A-220ENST00000543585 SEPT12Q8IYM1 358 aa22.18■■□□□ 1.14
SCNN1A-220ENST00000543585 STRN4Q9NRL3 753 aa22.18■■□□□ 1.14
SCNN1A-220ENST00000543585 KIF20BQ96Q89 1820 aa22.17■■□□□ 1.14
SCNN1A-220ENST00000543585 WNK3Q9BYP7 1800 aa22.17■■□□□ 1.14
SCNN1A-220ENST00000543585 TERF2IPQ9NYB0 399 aa22.17■■□□□ 1.14
SCNN1A-220ENST00000543585 AATKQ6ZMQ8 1374 aa22.16■■□□□ 1.14
SCNN1A-220ENST00000543585 ANKRD36BQ8N2N9 1353 aa22.16■■□□□ 1.14
SCNN1A-220ENST00000543585 SPATA31A1Q5TZJ5 1347 aa22.16■■□□□ 1.14
SCNN1A-220ENST00000543585 FAM98CQ17RN3 349 aaKnown RBP22.16■■□□□ 1.14
SCNN1A-220ENST00000543585 OVOS2A0A0J9YW53 1432 aa22.15■■□□□ 1.14
SCNN1A-220ENST00000543585 OVOS2Q6IE36 1432 aa22.15■■□□□ 1.14
SCNN1A-220ENST00000543585 SOX12O15370 315 aa22.15■■□□□ 1.14
SCNN1A-220ENST00000543585 ZBTB7CA1YPR0 619 aa22.14■■□□□ 1.13
SCNN1A-220ENST00000543585 LARP1Q6PKG0 1096 aaKnown RBP22.14■■□□□ 1.13
SCNN1A-220ENST00000543585 ARHGEF25Q86VW2 580 aa22.14■■□□□ 1.13
SCNN1A-220ENST00000543585 HSPA5P11021 654 aaKnown RBP22.13■■□□□ 1.13
SCNN1A-220ENST00000543585 AXIN2Q9Y2T1 843 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms