RNA–Protein interactions for RNA: ENST00000543510.1

TMEM258-207, Transcript of transmembrane protein 258, humanhuman

TSL 2 BASIC

Gene TMEM258, Length 1,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-207ENST00000543510 MYBBP1AQ9BQG0 1328 aaKnown RBP20.25■□□□□ 0.83
TMEM258-207ENST00000543510 POLR3AO14802 1390 aaPredicted RBP20.24■□□□□ 0.83
TMEM258-207ENST00000543510 TNNT2P45379 298 aaPredicted RBP20.24■□□□□ 0.83
TMEM258-207ENST00000543510 SLAIN2Q9P270 581 aa20.24■□□□□ 0.83
TMEM258-207ENST00000543510 PARD3Q8TEW0 1356 aa20.24■□□□□ 0.83
TMEM258-207ENST00000543510 MORC1Q86VD1 984 aa20.23■□□□□ 0.83
TMEM258-207ENST00000543510 NME9Q86XW9 330 aa20.22■□□□□ 0.83
TMEM258-207ENST00000543510 NRKQ7Z2Y5 1582 aa20.22■□□□□ 0.83
TMEM258-207ENST00000543510 TTC21BQ7Z4L5 1316 aa20.22■□□□□ 0.83
TMEM258-207ENST00000543510 FYB1O15117 783 aa20.21■□□□□ 0.83
TMEM258-207ENST00000543510 DDX17Q92841 729 aaKnown RBP20.21■□□□□ 0.83
TMEM258-207ENST00000543510 ANKRD26Q9UPS8 1709 aa20.21■□□□□ 0.83
TMEM258-207ENST00000543510 ZRANB1Q9UGI0 708 aa20.2■□□□□ 0.82
TMEM258-207ENST00000543510 FAM9BQ8IZU0 186 aa20.19■□□□□ 0.82
TMEM258-207ENST00000543510 NPC1L1Q9UHC9 1359 aa20.19■□□□□ 0.82
TMEM258-207ENST00000543510 BRD4O60885 1362 aaPredicted RBP20.19■□□□□ 0.82
TMEM258-207ENST00000543510 LMOD2Q6P5Q4 547 aa20.19■□□□□ 0.82
TMEM258-207ENST00000543510 BRINP3Q76B58 766 aa20.19■□□□□ 0.82
TMEM258-207ENST00000543510 NSD2O96028 1365 aa20.18■□□□□ 0.82
TMEM258-207ENST00000543510 PLEKHG5O94827 1062 aa20.18■□□□□ 0.82
TMEM258-207ENST00000543510 NUTM2GQ5VZR2 741 aa20.18■□□□□ 0.82
TMEM258-207ENST00000543510 KRT28Q7Z3Y7 464 aa20.18■□□□□ 0.82
TMEM258-207ENST00000543510 SCAF1Q9H7N4 1312 aaKnown RBP20.16■□□□□ 0.82
TMEM258-207ENST00000543510 NLRP13Q86W25 1043 aa20.16■□□□□ 0.82
TMEM258-207ENST00000543510 COG3Q96JB2 828 aa20.16■□□□□ 0.82
TMEM258-207ENST00000543510 TTC21AQ8NDW8 1320 aa20.16■□□□□ 0.82
TMEM258-207ENST00000543510 ABTB2Q8N961 1025 aa20.16■□□□□ 0.82
TMEM258-207ENST00000543510 HNRNPUQ00839 825 aaKnown RBP eCLIP20.15■□□□□ 0.82
TMEM258-207ENST00000543510 NPHP3Q7Z494 1330 aa20.14■□□□□ 0.82
TMEM258-207ENST00000543510 SOX12O15370 315 aa20.14■□□□□ 0.81
TMEM258-207ENST00000543510 PIP4K2BP78356 416 aa20.14■□□□□ 0.81
TMEM258-207ENST00000543510 PIK3C2AO00443 1686 aa20.14■□□□□ 0.81
TMEM258-207ENST00000543510 SSH2Q76I76 1423 aa20.14■□□□□ 0.81
TMEM258-207ENST00000543510 PPP2R1AP30153 589 aa20.13■□□□□ 0.81
TMEM258-207ENST00000543510 PNISRQ8TF01 805 aaKnown RBP20.13■□□□□ 0.81
TMEM258-207ENST00000543510 ROBO1Q9Y6N7 1651 aa20.13■□□□□ 0.81
TMEM258-207ENST00000543510 TOM1O60784 492 aa20.13■□□□□ 0.81
TMEM258-207ENST00000543510 NLRP6P59044 892 aa20.13■□□□□ 0.81
TMEM258-207ENST00000543510 UBAP1LF5GYI3 381 aa20.12■□□□□ 0.81
TMEM258-207ENST00000543510 TRPM3Q9HCF6 1732 aaPredicted RBP20.11■□□□□ 0.81
TMEM258-207ENST00000543510 CERKQ8TCT0 537 aa20.11■□□□□ 0.81
TMEM258-207ENST00000543510 MAP2P11137 1827 aaKnown RBP20.1■□□□□ 0.81
TMEM258-207ENST00000543510 FBLN1P23142 703 aa20.1■□□□□ 0.81
TMEM258-207ENST00000543510 GTF3C3Q9Y5Q9 886 aa20.09■□□□□ 0.81
TMEM258-207ENST00000543510 NHSL1Q5SYE7 1610 aa20.07■□□□□ 0.8
TMEM258-207ENST00000543510 PPM1GO15355 546 aaPredicted RBP20.07■□□□□ 0.8
TMEM258-207ENST00000543510 PXDNQ92626 1479 aa20.07■□□□□ 0.8
TMEM258-207ENST00000543510 OVOS2A0A0J9YW53 1432 aa20.06■□□□□ 0.8
TMEM258-207ENST00000543510 OVOS2Q6IE36 1432 aa20.06■□□□□ 0.8
TMEM258-207ENST00000543510 MARF1Q9Y4F3 1742 aaKnown RBP20.06■□□□□ 0.8
TMEM258-207ENST00000543510 MTHFSP49914 203 aa20.05■□□□□ 0.8
TMEM258-207ENST00000543510 ALS2Q96Q42 1657 aa20.05■□□□□ 0.8
TMEM258-207ENST00000543510 USP31Q70CQ4 1352 aa20.04■□□□□ 0.8
TMEM258-207ENST00000543510 IQSEC2Q5JU85 1478 aa20.04■□□□□ 0.8
TMEM258-207ENST00000543510 ZBTB7CA1YPR0 619 aa20.03■□□□□ 0.8
TMEM258-207ENST00000543510 RRS1Q15050 365 aaKnown RBP20.03■□□□□ 0.8
TMEM258-207ENST00000543510 SBNO1A3KN83 1393 aa20.03■□□□□ 0.8
TMEM258-207ENST00000543510 TNS3Q68CZ2 1445 aa20.03■□□□□ 0.8
TMEM258-207ENST00000543510 PHLPP1O60346 1717 aa20.02■□□□□ 0.8
TMEM258-207ENST00000543510 USP54Q70EL1 1684 aa20.01■□□□□ 0.79
TMEM258-207ENST00000543510 SOS2Q07890 1332 aaPredicted RBP20.01■□□□□ 0.79
TMEM258-207ENST00000543510 SPATA31A3Q5VYP0 1347 aa20.01■□□□□ 0.79
TMEM258-207ENST00000543510 CFAP53Q96M91 514 aa20■□□□□ 0.79
TMEM258-207ENST00000543510 EMILIN1Q9Y6C2 1016 aa20■□□□□ 0.79
TMEM258-207ENST00000543510 ZBED9Q6R2W3 1325 aa20■□□□□ 0.79
TMEM258-207ENST00000543510 CABLES1Q8TDN4 633 aa19.99■□□□□ 0.79
TMEM258-207ENST00000543510 POLKQ9UBT6 870 aa19.99■□□□□ 0.79
TMEM258-207ENST00000543510 ARHGEF10O15013 1369 aa19.98■□□□□ 0.79
TMEM258-207ENST00000543510 LTN1O94822 1766 aa19.98■□□□□ 0.79
TMEM258-207ENST00000543510 AHDC1Q5TGY3 1603 aaPredicted RBP19.98■□□□□ 0.79
TMEM258-207ENST00000543510 AATKQ6ZMQ8 1374 aa19.98■□□□□ 0.79
TMEM258-207ENST00000543510 HAP1P54257 671 aaPredicted RBP19.97■□□□□ 0.79
TMEM258-207ENST00000543510 KCNH5Q8NCM2 988 aa19.97■□□□□ 0.79
TMEM258-207ENST00000543510 INSRP06213 1382 aa19.96■□□□□ 0.79
TMEM258-207ENST00000543510 AMPHP49418 695 aa19.96■□□□□ 0.79
TMEM258-207ENST00000543510 WDR43Q15061 677 aaKnown RBP eCLIP19.96■□□□□ 0.79
TMEM258-207ENST00000543510 GCP02774 474 aa19.95■□□□□ 0.78
TMEM258-207ENST00000543510 PHRF1Q9P1Y6 1649 aaKnown RBP19.95■□□□□ 0.78
TMEM258-207ENST00000543510 MED1Q15648 1581 aaPredicted RBP19.95■□□□□ 0.78
TMEM258-207ENST00000543510 MAP3K19Q56UN5 1328 aa19.95■□□□□ 0.78
TMEM258-207ENST00000543510 LRRC59Q96AG4 307 aaKnown RBP19.94■□□□□ 0.78
TMEM258-207ENST00000543510 ZC3H6P61129 1189 aaKnown RBP19.94■□□□□ 0.78
TMEM258-207ENST00000543510 SLIT3O75094 1523 aa19.93■□□□□ 0.78
TMEM258-207ENST00000543510 PEAK1Q9H792 1746 aa19.93■□□□□ 0.78
TMEM258-207ENST00000543510 USP19O94966 1318 aa19.92■□□□□ 0.78
TMEM258-207ENST00000543510 NFAT5O94916 1531 aa19.92■□□□□ 0.78
TMEM258-207ENST00000543510 U2SURPO15042 1029 aaKnown RBP19.91■□□□□ 0.78
TMEM258-207ENST00000543510 COL16A1Q07092 1604 aaPredicted RBP19.91■□□□□ 0.78
TMEM258-207ENST00000543510 CRYBG1Q9Y4K1 1723 aa19.91■□□□□ 0.78
TMEM258-207ENST00000543510 DIAPH1O60610 1272 aaKnown RBP19.91■□□□□ 0.78
TMEM258-207ENST00000543510 CDK12Q9NYV4 1490 aaPredicted RBP19.9■□□□□ 0.78
TMEM258-207ENST00000543510 SHPRHQ149N8 1683 aa19.9■□□□□ 0.78
TMEM258-207ENST00000543510 SMG6Q86US8 1419 aaKnown RBP19.89■□□□□ 0.78
TMEM258-207ENST00000543510 SENP3-EIF4A1A0A087X0R7 540 aa19.89■□□□□ 0.77
TMEM258-207ENST00000543510 HSP90AB2PQ58FF8 381 aa19.89■□□□□ 0.77
TMEM258-207ENST00000543510 LTV1Q96GA3 475 aaPredicted RBP19.89■□□□□ 0.77
TMEM258-207ENST00000543510 ABCA3Q99758 1704 aa19.89■□□□□ 0.77
TMEM258-207ENST00000543510 ADAMTS8Q9UP79 889 aa19.88■□□□□ 0.77
TMEM258-207ENST00000543510 NUDCQ9Y266 331 aa19.88■□□□□ 0.77
TMEM258-207ENST00000543510 FLT4P35916 1363 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms