RNA–Protein interactions for RNA: ENST00000543184.5

PRAME-214, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,758 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-214ENST00000543184 TCP11L2Q8N4U5 519 aa18.14■□□□□ 0.5
PRAME-214ENST00000543184 SLC12A5Q9H2X9 1139 aa18.14■□□□□ 0.5
PRAME-214ENST00000543184 PDE3AQ14432 1141 aa18.13■□□□□ 0.49
PRAME-214ENST00000543184 MYOM1P52179 1685 aa18.13■□□□□ 0.49
PRAME-214ENST00000543184 BECN1Q14457 450 aa18.13■□□□□ 0.49
PRAME-214ENST00000543184 AMOTL2Q9Y2J4 779 aa18.13■□□□□ 0.49
PRAME-214ENST00000543184 IQGAP1P46940 1657 aa18.13■□□□□ 0.49
PRAME-214ENST00000543184 AEBP2Q6ZN18 517 aaPredicted RBP18.13■□□□□ 0.49
PRAME-214ENST00000543184 IFT172Q9UG01 1749 aa18.12■□□□□ 0.49
PRAME-214ENST00000543184 KCNA6P17658 529 aa18.12■□□□□ 0.49
PRAME-214ENST00000543184 MORC1Q86VD1 984 aa18.12■□□□□ 0.49
PRAME-214ENST00000543184 NRXN1Q9ULB1 1477 aa18.11■□□□□ 0.49
PRAME-214ENST00000543184 ADAMTS13Q76LX8 1427 aa18.11■□□□□ 0.49
PRAME-214ENST00000543184 PANK2Q9BZ23 570 aa18.11■□□□□ 0.49
PRAME-214ENST00000543184 ANTXR1Q9H6X2 564 aa18.11■□□□□ 0.49
PRAME-214ENST00000543184 ALKQ9UM73 1620 aa18.11■□□□□ 0.49
PRAME-214ENST00000543184 LMTK3Q96Q04 1460 aa18.11■□□□□ 0.49
PRAME-214ENST00000543184 MAPK8IP3Q9UPT6 1336 aa18.1■□□□□ 0.49
PRAME-214ENST00000543184 MFAP1P55081 439 aaKnown RBP18.1■□□□□ 0.49
PRAME-214ENST00000543184 TSR2Q969E8 191 aaKnown RBP18.09■□□□□ 0.49
PRAME-214ENST00000543184 STAC3Q96MF2 364 aa18.09■□□□□ 0.49
PRAME-214ENST00000543184 PLEKHG1Q9ULL1 1385 aa18.09■□□□□ 0.49
PRAME-214ENST00000543184 FAM43AQ8N2R8 423 aa18.09■□□□□ 0.49
PRAME-214ENST00000543184 YTHDC2Q9H6S0 1430 aaKnown RBP18.08■□□□□ 0.49
PRAME-214ENST00000543184 CABP2Q9NPB3 220 aa18.08■□□□□ 0.48
PRAME-214ENST00000543184 MTHFSP49914 203 aa18.08■□□□□ 0.48
PRAME-214ENST00000543184 TBC1D32Q96NH3 1257 aa18.08■□□□□ 0.48
PRAME-214ENST00000543184 ARHGAP23Q9P227 1491 aa18.07■□□□□ 0.48
PRAME-214ENST00000543184 ADGRB1O14514 1584 aa18.07■□□□□ 0.48
PRAME-214ENST00000543184 PTPRUQ92729 1446 aa18.07■□□□□ 0.48
PRAME-214ENST00000543184 C14orf37Q86TY3 774 aa18.07■□□□□ 0.48
PRAME-214ENST00000543184 UPF2Q9HAU5 1272 aaKnown RBP18.07■□□□□ 0.48
PRAME-214ENST00000543184 SLIT1O75093 1534 aa18.06■□□□□ 0.48
PRAME-214ENST00000543184 ROBO2Q9HCK4 1378 aa18.06■□□□□ 0.48
PRAME-214ENST00000543184 NPHP4O75161 1426 aaPredicted RBP18.05■□□□□ 0.48
PRAME-214ENST00000543184 NRXN3Q9Y4C0 1643 aa18.05■□□□□ 0.48
PRAME-214ENST00000543184 VIRMAQ69YN4 1812 aaKnown RBP18.05■□□□□ 0.48
PRAME-214ENST00000543184 RUNDC1Q96C34 613 aa18.05■□□□□ 0.48
PRAME-214ENST00000543184 NSD3Q9BZ95 1437 aa18.05■□□□□ 0.48
PRAME-214ENST00000543184 NEURL4Q96JN8 1562 aa18.05■□□□□ 0.48
PRAME-214ENST00000543184 XRCC6P12956 609 aaKnown RBP eCLIP18.04■□□□□ 0.48
PRAME-214ENST00000543184 SRPK2P78362 688 aaKnown RBP18.04■□□□□ 0.48
PRAME-214ENST00000543184 PMFBP1Q8TBY8 1022 aa18.04■□□□□ 0.48
PRAME-214ENST00000543184 KDM5AP29375 1690 aaKnown RBP18.04■□□□□ 0.48
PRAME-214ENST00000543184 ZNF335Q9H4Z2 1342 aaPredicted RBP18.03■□□□□ 0.48
PRAME-214ENST00000543184 U2AF1L5P0DN76 240 aaPredicted RBP18.03■□□□□ 0.48
PRAME-214ENST00000543184 U2AF1Q01081 240 aaKnown RBP eCLIP18.03■□□□□ 0.482e-24■□□□□ 8.6
PRAME-214ENST00000543184 TBX22Q9Y458 520 aa18.03■□□□□ 0.48
PRAME-214ENST00000543184 NPC1L1Q9UHC9 1359 aa18.02■□□□□ 0.47
PRAME-214ENST00000543184 FTSJ3Q8IY81 847 aaKnown RBP18.01■□□□□ 0.47
PRAME-214ENST00000543184 UBE2Q2Q8WVN8 375 aa18.01■□□□□ 0.47
PRAME-214ENST00000543184 RWDD1Q9H446 243 aaPredicted RBP18.01■□□□□ 0.47
PRAME-214ENST00000543184 PLEKHG5O94827 1062 aa18■□□□□ 0.47
PRAME-214ENST00000543184 MCM4P33991 863 aa17.99■□□□□ 0.47
PRAME-214ENST00000543184 C22orf23Q9BZE7 217 aa17.99■□□□□ 0.47
PRAME-214ENST00000543184 FOXD4L1Q9NU39 408 aa17.99■□□□□ 0.47
PRAME-214ENST00000543184 ZNF142P52746 1687 aaPredicted RBP17.99■□□□□ 0.47
PRAME-214ENST00000543184 POLR3AO14802 1390 aaPredicted RBP17.98■□□□□ 0.47
PRAME-214ENST00000543184 ITPRIPQ8IWB1 547 aa17.98■□□□□ 0.47
PRAME-214ENST00000543184 U2SURPO15042 1029 aaKnown RBP17.98■□□□□ 0.47
PRAME-214ENST00000543184 EXOSC9Q06265 439 aaKnown RBP17.98■□□□□ 0.47
PRAME-214ENST00000543184 MVPQ14764 893 aaKnown RBP17.98■□□□□ 0.47
PRAME-214ENST00000543184 GOLGA6L3A6NEY3 463 aa17.97■□□□□ 0.47
PRAME-214ENST00000543184 PROSER2Q86WR7 435 aaPredicted RBP17.97■□□□□ 0.47
PRAME-214ENST00000543184 SMC4Q9NTJ3 1288 aa17.97■□□□□ 0.47
PRAME-214ENST00000543184 CDK19Q9BWU1 502 aa17.97■□□□□ 0.47
PRAME-214ENST00000543184 RSPH6AQ9H0K4 717 aa17.97■□□□□ 0.47
PRAME-214ENST00000543184 SETBP1Q9Y6X0 1596 aa17.96■□□□□ 0.47
PRAME-214ENST00000543184 DZIP1LQ8IYY4 767 aaKnown RBP17.96■□□□□ 0.47
PRAME-214ENST00000543184 TRAK2O60296 914 aa17.95■□□□□ 0.46
PRAME-214ENST00000543184 TRIM27P14373 513 aa17.95■□□□□ 0.46
PRAME-214ENST00000543184 L1TD1Q5T7N2 865 aaKnown RBP17.95■□□□□ 0.46
PRAME-214ENST00000543184 ZKSCAN2Q63HK3 967 aa17.95■□□□□ 0.46
PRAME-214ENST00000543184 NAP1L5Q96NT1 182 aaPredicted RBP17.94■□□□□ 0.46
PRAME-214ENST00000543184 ABCC11Q96J66 1382 aa17.94■□□□□ 0.46
PRAME-214ENST00000543184 MED14O60244 1454 aa17.94■□□□□ 0.46
PRAME-214ENST00000543184 SHPRHQ149N8 1683 aa17.93■□□□□ 0.46
PRAME-214ENST00000543184 SSH1Q8WYL5 1049 aa17.93■□□□□ 0.46
PRAME-214ENST00000543184 WDR63Q8IWG1 891 aa17.92■□□□□ 0.46
PRAME-214ENST00000543184 LNPKQ9C0E8 428 aa17.92■□□□□ 0.46
PRAME-214ENST00000543184 PHF23Q9BUL5 403 aaPredicted RBP17.92■□□□□ 0.46
PRAME-214ENST00000543184 NOB1Q9ULX3 412 aaKnown RBP17.92■□□□□ 0.46
PRAME-214ENST00000543184 SETD1AO15047 1707 aaKnown RBP17.92■□□□□ 0.46
PRAME-214ENST00000543184 NINLQ9Y2I6 1382 aa17.92■□□□□ 0.46
PRAME-214ENST00000543184 CABP1Q9NZU7 370 aa17.91■□□□□ 0.46
PRAME-214ENST00000543184 GGNBP2Q9H3C7 697 aa17.91■□□□□ 0.46
PRAME-214ENST00000543184 EVC2Q86UK5 1308 aa17.91■□□□□ 0.46
PRAME-214ENST00000543184 TMEM57Q8N5G2 664 aa17.91■□□□□ 0.46
PRAME-214ENST00000543184 FBLN1P23142 703 aa17.9■□□□□ 0.46
PRAME-214ENST00000543184 MYH16Q9H6N6 1097 aa17.9■□□□□ 0.46
PRAME-214ENST00000543184 CFAP53Q96M91 514 aa17.9■□□□□ 0.46
PRAME-214ENST00000543184 KIAA1210Q9ULL0 1709 aa17.89■□□□□ 0.46
PRAME-214ENST00000543184 CHMP5Q9NZZ3 219 aa17.89■□□□□ 0.45
PRAME-214ENST00000543184 ARHGEF28Q8N1W1 1705 aaKnown RBP17.89■□□□□ 0.45
PRAME-214ENST00000543184 FSD2A1L4K1 749 aa17.89■□□□□ 0.45
PRAME-214ENST00000543184 WASLO00401 505 aaPredicted RBP17.89■□□□□ 0.45
PRAME-214ENST00000543184 NGEFQ8N5V2 710 aa17.89■□□□□ 0.45
PRAME-214ENST00000543184 C1orf115Q9H7X2 142 aa17.89■□□□□ 0.45
PRAME-214ENST00000543184 IQSEC2Q5JU85 1478 aa17.88■□□□□ 0.45
PRAME-214ENST00000543184 XPCQ01831 940 aaPredicted RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms