RNA–Protein interactions for RNA: ENST00000542669.1

PACRG-206, Transcript of parkin coregulated, humanhuman

TSL 4

Gene PACRG, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-206ENST00000542669 SSH2Q76I76 1423 aa9.07□□□□□ -0.96
PACRG-206ENST00000542669 PROSER2Q86WR7 435 aaPredicted RBP9.07□□□□□ -0.96
PACRG-206ENST00000542669 RBM33Q96EV2 1170 aaKnown RBP9.07□□□□□ -0.96
PACRG-206ENST00000542669 GGNBP2Q9H3C7 697 aa9.07□□□□□ -0.96
PACRG-206ENST00000542669 NCOA3Q9Y6Q9 1424 aa9.06□□□□□ -0.96
PACRG-206ENST00000542669 HNRNPUQ00839 825 aaKnown RBP eCLIP9.06□□□□□ -0.96
PACRG-206ENST00000542669 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.06□□□□□ -0.96
PACRG-206ENST00000542669 BLMP54132 1417 aaPredicted RBP9.05□□□□□ -0.96
PACRG-206ENST00000542669 TMEM94Q12767 1356 aa9.05□□□□□ -0.96
PACRG-206ENST00000542669 TNNT2P45379 298 aaPredicted RBP9.05□□□□□ -0.96
PACRG-206ENST00000542669 DCCP43146 1447 aa9.05□□□□□ -0.96
PACRG-206ENST00000542669 TTC21BQ7Z4L5 1316 aa9.05□□□□□ -0.96
PACRG-206ENST00000542669 SHPRHQ149N8 1683 aa9.04□□□□□ -0.96
PACRG-206ENST00000542669 XIRP1Q702N8 1843 aaKnown RBP9.04□□□□□ -0.96
PACRG-206ENST00000542669 C14orf37Q86TY3 774 aa9.04□□□□□ -0.96
PACRG-206ENST00000542669 NME9Q86XW9 330 aa9.04□□□□□ -0.96
PACRG-206ENST00000542669 PMFBP1Q8TBY8 1022 aa9.04□□□□□ -0.96
PACRG-206ENST00000542669 C19orf44Q9H6X5 657 aa9.04□□□□□ -0.96
PACRG-206ENST00000542669 ZBED9Q6R2W3 1325 aa9.04□□□□□ -0.96
PACRG-206ENST00000542669 MTHFSP49914 203 aa9.03□□□□□ -0.96
PACRG-206ENST00000542669 NGDNQ8NEJ9 315 aaKnown RBP9.03□□□□□ -0.96
PACRG-206ENST00000542669 OVOS2A0A0J9YW53 1432 aa9.03□□□□□ -0.96
PACRG-206ENST00000542669 OVOS2Q6IE36 1432 aa9.03□□□□□ -0.96
PACRG-206ENST00000542669 TTC21AQ8NDW8 1320 aa9.03□□□□□ -0.96
PACRG-206ENST00000542669 COL3A1P02461 1466 aaPredicted RBP9.02□□□□□ -0.96
PACRG-206ENST00000542669 AATKQ6ZMQ8 1374 aa9.02□□□□□ -0.97
PACRG-206ENST00000542669 LRRC7Q96NW7 1537 aa9.02□□□□□ -0.97
PACRG-206ENST00000542669 PIK3C2AO00443 1686 aa9.02□□□□□ -0.97
PACRG-206ENST00000542669 USP54Q70EL1 1684 aa9.02□□□□□ -0.97
PACRG-206ENST00000542669 ZRANB1Q9UGI0 708 aa9.02□□□□□ -0.97
PACRG-206ENST00000542669 ADAMTS8Q9UP79 889 aa9.02□□□□□ -0.97
PACRG-206ENST00000542669 PHF8Q9UPP1 1060 aa9.02□□□□□ -0.97
PACRG-206ENST00000542669 SMG6Q86US8 1419 aaKnown RBP9.02□□□□□ -0.97
PACRG-206ENST00000542669 PNPLA6Q8IY17 1366 aa9.01□□□□□ -0.97
PACRG-206ENST00000542669 KIF1AQ12756 1690 aa9.01□□□□□ -0.97
PACRG-206ENST00000542669 MAP2P11137 1827 aaKnown RBP9.01□□□□□ -0.97
PACRG-206ENST00000542669 MST1RQ04912 1400 aa9.01□□□□□ -0.97
PACRG-206ENST00000542669 WDR43Q15061 677 aaKnown RBP eCLIP9.01□□□□□ -0.97
PACRG-206ENST00000542669 COG3Q96JB2 828 aa9.01□□□□□ -0.97
PACRG-206ENST00000542669 RNF216Q9NWF9 866 aaPredicted RBP9.01□□□□□ -0.97
PACRG-206ENST00000542669 C1orf167Q5SNV9 1468 aa9.01□□□□□ -0.97
PACRG-206ENST00000542669 ZNF335Q9H4Z2 1342 aaPredicted RBP9.01□□□□□ -0.97
PACRG-206ENST00000542669 USP31Q70CQ4 1352 aa9□□□□□ -0.97
PACRG-206ENST00000542669 MARF1Q9Y4F3 1742 aaKnown RBP9□□□□□ -0.97
PACRG-206ENST00000542669 ESCO1Q5FWF5 840 aa9□□□□□ -0.97
PACRG-206ENST00000542669 CFAP53Q96M91 514 aa9□□□□□ -0.97
PACRG-206ENST00000542669 POLKQ9UBT6 870 aa9□□□□□ -0.97
PACRG-206ENST00000542669 CDK12Q9NYV4 1490 aaPredicted RBP9□□□□□ -0.97
PACRG-206ENST00000542669 MSH6P52701 1360 aa8.99□□□□□ -0.97
PACRG-206ENST00000542669 ATF3P18847 181 aa8.99□□□□□ -0.97
PACRG-206ENST00000542669 ORAI2Q96SN7 254 aa8.99□□□□□ -0.97
PACRG-206ENST00000542669 TRPM3Q9HCF6 1732 aaPredicted RBP8.98□□□□□ -0.97
PACRG-206ENST00000542669 FBLN1P23142 703 aa8.98□□□□□ -0.97
PACRG-206ENST00000542669 PPP4R3CPQ6ZMV5 832 aa8.98□□□□□ -0.97
PACRG-206ENST00000542669 CADPS2Q86UW7 1296 aa8.98□□□□□ -0.97
PACRG-206ENST00000542669 EMILIN1Q9Y6C2 1016 aa8.97□□□□□ -0.97
PACRG-206ENST00000542669 PEAK1Q9H792 1746 aa8.97□□□□□ -0.97
PACRG-206ENST00000542669 FOXO3O43524 673 aa8.96□□□□□ -0.98
PACRG-206ENST00000542669 PSME1Q06323 249 aa8.96□□□□□ -0.98
PACRG-206ENST00000542669 RRS1Q15050 365 aaKnown RBP8.96□□□□□ -0.98
PACRG-206ENST00000542669 SENP3-EIF4A1A0A087X0R7 540 aa8.95□□□□□ -0.98
PACRG-206ENST00000542669 DIAPH1O60610 1272 aaKnown RBP8.95□□□□□ -0.98
PACRG-206ENST00000542669 NLRP6P59044 892 aa8.95□□□□□ -0.98
PACRG-206ENST00000542669 ABTB2Q8N961 1025 aa8.95□□□□□ -0.98
PACRG-206ENST00000542669 NUDCQ9Y266 331 aa8.95□□□□□ -0.98
PACRG-206ENST00000542669 IQSEC2Q5JU85 1478 aa8.95□□□□□ -0.98
PACRG-206ENST00000542669 ALS2Q96Q42 1657 aa8.94□□□□□ -0.98
PACRG-206ENST00000542669 PPM1GO15355 546 aaPredicted RBP8.94□□□□□ -0.98
PACRG-206ENST00000542669 PAK3O75914 559 aaPredicted RBP8.94□□□□□ -0.98
PACRG-206ENST00000542669 U2AF1L5P0DN76 240 aaPredicted RBP8.94□□□□□ -0.98
PACRG-206ENST00000542669 U2AF1Q01081 240 aaKnown RBP eCLIP8.94□□□□□ -0.98
PACRG-206ENST00000542669 CCDC146Q8IYE0 955 aa8.94□□□□□ -0.98
PACRG-206ENST00000542669 NFAT5O94916 1531 aa8.94□□□□□ -0.98
PACRG-206ENST00000542669 APAF1O14727 1248 aa8.93□□□□□ -0.98
PACRG-206ENST00000542669 IL13P35225 146 aa8.93□□□□□ -0.98
PACRG-206ENST00000542669 XPCQ01831 940 aaPredicted RBP8.93□□□□□ -0.98
PACRG-206ENST00000542669 PDE3BQ13370 1112 aa8.93□□□□□ -0.98
PACRG-206ENST00000542669 NUTM2GQ5VZR2 741 aa8.93□□□□□ -0.98
PACRG-206ENST00000542669 KRT28Q7Z3Y7 464 aa8.93□□□□□ -0.98
PACRG-206ENST00000542669 CNKSR2Q8WXI2 1034 aa8.93□□□□□ -0.98
PACRG-206ENST00000542669 RUNDC1Q96C34 613 aa8.93□□□□□ -0.98
PACRG-206ENST00000542669 MAP3K19Q56UN5 1328 aa8.93□□□□□ -0.98
PACRG-206ENST00000542669 ZNF521Q96K83 1311 aa8.93□□□□□ -0.98
PACRG-206ENST00000542669 SBNO1A3KN83 1393 aa8.93□□□□□ -0.98
PACRG-206ENST00000542669 KIF24Q5T7B8 1368 aa8.93□□□□□ -0.98
PACRG-206ENST00000542669 PXDNQ92626 1479 aa8.93□□□□□ -0.98
PACRG-206ENST00000542669 SLIT3O75094 1523 aa8.93□□□□□ -0.98
PACRG-206ENST00000542669 LTBP4Q8N2S1 1624 aa8.93□□□□□ -0.98
PACRG-206ENST00000542669 RGPD1P0DJD0 1748 aa8.92□□□□□ -0.98
PACRG-206ENST00000542669 FLT4P35916 1363 aa8.92□□□□□ -0.98
PACRG-206ENST00000542669 USP19O94966 1318 aa8.92□□□□□ -0.98
PACRG-206ENST00000542669 NPHP3Q7Z494 1330 aa8.92□□□□□ -0.98
PACRG-206ENST00000542669 U2SURPO15042 1029 aaKnown RBP8.92□□□□□ -0.98
PACRG-206ENST00000542669 BRINP3Q76B58 766 aa8.92□□□□□ -0.98
PACRG-206ENST00000542669 NGEFQ8N5V2 710 aa8.92□□□□□ -0.98
PACRG-206ENST00000542669 SALL2Q9Y467 1007 aaPredicted RBP8.92□□□□□ -0.98
PACRG-206ENST00000542669 LTN1O94822 1766 aa8.91□□□□□ -0.98
PACRG-206ENST00000542669 PHRF1Q9P1Y6 1649 aaKnown RBP8.91□□□□□ -0.98
PACRG-206ENST00000542669 SOX12O15370 315 aa8.91□□□□□ -0.98
PACRG-206ENST00000542669 FCHSD2O94868 740 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms