RNA–Protein interactions for RNA: ENST00000542150.5

COPS7A-213, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-213ENST00000542150 SPATA31A7Q8IWB4 1347 aa17.89■□□□□ 0.45
COPS7A-213ENST00000542150 SF3B2Q13435 895 aaKnown RBP17.88■□□□□ 0.45
COPS7A-213ENST00000542150 NRAPQ86VF7 1730 aa17.88■□□□□ 0.45
COPS7A-213ENST00000542150 NGDNQ8NEJ9 315 aaKnown RBP17.86■□□□□ 0.45
COPS7A-213ENST00000542150 NUDT16Q96DE0 195 aaKnown RBP17.85■□□□□ 0.45
COPS7A-213ENST00000542150 COL14A1Q05707 1796 aaKnown RBP17.84■□□□□ 0.45
COPS7A-213ENST00000542150 ATP7BP35670 1465 aa17.84■□□□□ 0.45
COPS7A-213ENST00000542150 CRYBG1Q9Y4K1 1723 aa17.83■□□□□ 0.44
COPS7A-213ENST00000542150 PAK3O75914 559 aaPredicted RBP17.82■□□□□ 0.44
COPS7A-213ENST00000542150 BAG6P46379 1132 aa17.82■□□□□ 0.44
COPS7A-213ENST00000542150 POLR3AO14802 1390 aaPredicted RBP17.81■□□□□ 0.44
COPS7A-213ENST00000542150 KIAA0232Q92628 1395 aa17.81■□□□□ 0.44
COPS7A-213ENST00000542150 SPATA31A1Q5TZJ5 1347 aa17.81■□□□□ 0.44
COPS7A-213ENST00000542150 A0A0G2JS52 829 aa17.81■□□□□ 0.44
COPS7A-213ENST00000542150 MYT1Q01538 1121 aa17.81■□□□□ 0.44
COPS7A-213ENST00000542150 FAM182BQ5T319 152 aa17.81■□□□□ 0.44
COPS7A-213ENST00000542150 CDK19Q9BWU1 502 aa17.81■□□□□ 0.44
COPS7A-213ENST00000542150 PRDM11Q9NQV5 511 aa17.81■□□□□ 0.44
COPS7A-213ENST00000542150 THSD7AQ9UPZ6 1657 aa17.8■□□□□ 0.44
COPS7A-213ENST00000542150 DISP2A7MBM2 1401 aa17.8■□□□□ 0.44
COPS7A-213ENST00000542150 PLEKHG3A1L390 1219 aa17.79■□□□□ 0.44
COPS7A-213ENST00000542150 EN1Q05925 392 aaPredicted RBP17.79■□□□□ 0.44
COPS7A-213ENST00000542150 NBPF8Q3BBV2 869 aa17.79■□□□□ 0.44
COPS7A-213ENST00000542150 PSDA5PKW4 1024 aaPredicted RBP17.78■□□□□ 0.44
COPS7A-213ENST00000542150 CHRNA2Q15822 529 aa17.78■□□□□ 0.44
COPS7A-213ENST00000542150 CCDC61Q9Y6R9 512 aa17.78■□□□□ 0.44
COPS7A-213ENST00000542150 ARHGEF28Q8N1W1 1705 aaKnown RBP17.78■□□□□ 0.44
COPS7A-213ENST00000542150 ACEP12821 1306 aa17.77■□□□□ 0.44
COPS7A-213ENST00000542150 LRP5O75197 1615 aa17.77■□□□□ 0.44
COPS7A-213ENST00000542150 ZC3H6P61129 1189 aaKnown RBP17.76■□□□□ 0.43
COPS7A-213ENST00000542150 NBPF1Q3BBV0 1214 aa17.75■□□□□ 0.43
COPS7A-213ENST00000542150 NUTM2GQ5VZR2 741 aa17.74■□□□□ 0.43
COPS7A-213ENST00000542150 BARGINQ6ZT62 677 aa17.74■□□□□ 0.43
COPS7A-213ENST00000542150 CAMKK2Q96RR4 588 aa17.74■□□□□ 0.43
COPS7A-213ENST00000542150 USP19O94966 1318 aa17.73■□□□□ 0.43
COPS7A-213ENST00000542150 EZH2Q15910 746 aaKnown RBP17.73■□□□□ 0.43
COPS7A-213ENST00000542150 STRN4Q9NRL3 753 aa17.73■□□□□ 0.43
COPS7A-213ENST00000542150 CPDO75976 1380 aa17.73■□□□□ 0.43
COPS7A-213ENST00000542150 SSH2Q76I76 1423 aa17.72■□□□□ 0.43
COPS7A-213ENST00000542150 FAM196AQ6ZSG2 479 aa17.72■□□□□ 0.43
COPS7A-213ENST00000542150 PHRF1Q9P1Y6 1649 aaKnown RBP17.72■□□□□ 0.43
COPS7A-213ENST00000542150 TOPAZ1Q8N9V7 1692 aa17.71■□□□□ 0.43
COPS7A-213ENST00000542150 CAMTA1Q9Y6Y1 1673 aa17.71■□□□□ 0.43
COPS7A-213ENST00000542150 R3HDM1Q15032 1099 aaKnown RBP17.71■□□□□ 0.43
COPS7A-213ENST00000542150 RGPD1P0DJD0 1748 aa17.71■□□□□ 0.43
COPS7A-213ENST00000542150 ITSN1Q15811 1721 aa17.71■□□□□ 0.43
COPS7A-213ENST00000542150 TRIM37O94972 964 aa17.7■□□□□ 0.42
COPS7A-213ENST00000542150 LARP1Q6PKG0 1096 aaKnown RBP17.7■□□□□ 0.42
COPS7A-213ENST00000542150 ABTB2Q8N961 1025 aa17.7■□□□□ 0.42
COPS7A-213ENST00000542150 GCP02774 474 aa17.69■□□□□ 0.42
COPS7A-213ENST00000542150 TNS1Q9HBL0 1735 aaKnown RBP17.69■□□□□ 0.42
COPS7A-213ENST00000542150 KIAA1210Q9ULL0 1709 aa17.69■□□□□ 0.42
COPS7A-213ENST00000542150 EVA1CP58658 441 aa17.68■□□□□ 0.42
COPS7A-213ENST00000542150 NRKQ7Z2Y5 1582 aa17.68■□□□□ 0.42
COPS7A-213ENST00000542150 TCP11L2Q8N4U5 519 aa17.67■□□□□ 0.42
COPS7A-213ENST00000542150 USP35Q9P2H5 1018 aa17.67■□□□□ 0.42
COPS7A-213ENST00000542150 LMO7Q8WWI1 1683 aa17.67■□□□□ 0.42
COPS7A-213ENST00000542150 BRD4O60885 1362 aaPredicted RBP17.66■□□□□ 0.42
COPS7A-213ENST00000542150 PARD3Q8TEW0 1356 aa17.66■□□□□ 0.42
COPS7A-213ENST00000542150 APBA3O96018 575 aa17.66■□□□□ 0.42
COPS7A-213ENST00000542150 NLRP13Q86W25 1043 aa17.66■□□□□ 0.42
COPS7A-213ENST00000542150 THRAP3Q9Y2W1 955 aaKnown RBP17.66■□□□□ 0.42
COPS7A-213ENST00000542150 CENPJQ9HC77 1338 aaPredicted RBP17.66■□□□□ 0.42
COPS7A-213ENST00000542150 PPIP5K1Q6PFW1 1433 aa17.65■□□□□ 0.42
COPS7A-213ENST00000542150 PDE3BQ13370 1112 aa17.65■□□□□ 0.42
COPS7A-213ENST00000542150 CABP2Q9NPB3 220 aa17.65■□□□□ 0.42
COPS7A-213ENST00000542150 SRPK2P78362 688 aaKnown RBP17.63■□□□□ 0.41
COPS7A-213ENST00000542150 CABP1Q9NZU7 370 aa17.63■□□□□ 0.41
COPS7A-213ENST00000542150 COL5A2P05997 1499 aaPredicted RBP17.63■□□□□ 0.41
COPS7A-213ENST00000542150 USP6P35125 1406 aa17.61■□□□□ 0.41
COPS7A-213ENST00000542150 AATKQ6ZMQ8 1374 aa17.6■□□□□ 0.41
COPS7A-213ENST00000542150 CRB1P82279 1406 aa17.59■□□□□ 0.41
COPS7A-213ENST00000542150 L3MBTL2Q969R5 705 aa17.59■□□□□ 0.41
COPS7A-213ENST00000542150 SLIT3O75094 1523 aa17.58■□□□□ 0.41
COPS7A-213ENST00000542150 NLRP6P59044 892 aa17.58■□□□□ 0.4
COPS7A-213ENST00000542150 C11orf95C9JLR9 678 aaPredicted RBP17.57■□□□□ 0.4
COPS7A-213ENST00000542150 AXIN2Q9Y2T1 843 aa17.57■□□□□ 0.4
COPS7A-213ENST00000542150 RREB1Q92766 1687 aa17.56■□□□□ 0.4
COPS7A-213ENST00000542150 PARP4Q9UKK3 1724 aaKnown RBP17.55■□□□□ 0.4
COPS7A-213ENST00000542150 PLSCR1O15162 318 aa17.54■□□□□ 0.4
COPS7A-213ENST00000542150 NBPF14Q5TI25 921 aa17.54■□□□□ 0.4
COPS7A-213ENST00000542150 ARHGEF25Q86VW2 580 aa17.54■□□□□ 0.4
COPS7A-213ENST00000542150 EVC2Q86UK5 1308 aa17.53■□□□□ 0.4
COPS7A-213ENST00000542150 PEAK1Q9H792 1746 aa17.53■□□□□ 0.4
COPS7A-213ENST00000542150 NUP188Q5SRE5 1749 aa17.52■□□□□ 0.4
COPS7A-213ENST00000542150 TTC21BQ7Z4L5 1316 aa17.52■□□□□ 0.4
COPS7A-213ENST00000542150 WDR17Q8IZU2 1322 aa17.52■□□□□ 0.4
COPS7A-213ENST00000542150 PTF1AQ7RTS3 328 aa17.52■□□□□ 0.4
COPS7A-213ENST00000542150 ZNF692Q9BU19 519 aaPredicted RBP17.52■□□□□ 0.4
COPS7A-213ENST00000542150 COL18A1P39060 1754 aa17.52■□□□□ 0.4
COPS7A-213ENST00000542150 OVOS2A0A0G2JMS6 1433 aa17.52■□□□□ 0.4
COPS7A-213ENST00000542150 OVOS2A0A0J9YW53 1432 aa17.52■□□□□ 0.4
COPS7A-213ENST00000542150 BCL9O00512 1426 aa17.52■□□□□ 0.4
COPS7A-213ENST00000542150 OVOS2Q6IE36 1432 aa17.52■□□□□ 0.4
COPS7A-213ENST00000542150 QRICH2Q9H0J4 1663 aa17.52■□□□□ 0.39
COPS7A-213ENST00000542150 DDB1Q16531 1140 aa17.51■□□□□ 0.39
COPS7A-213ENST00000542150 PIK3C2AO00443 1686 aa17.51■□□□□ 0.39
COPS7A-213ENST00000542150 CPSF1Q10570 1443 aaKnown RBP17.5■□□□□ 0.39
COPS7A-213ENST00000542150 ZBTB7CA1YPR0 619 aa17.5■□□□□ 0.39
COPS7A-213ENST00000542150 TOM1L2Q6ZVM7 507 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms