RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 ATF5Q9Y2D1 282 aaPredicted RBP14.98□□□□□ -0.01
CHFR-220ENST00000541817 ARHGEF10O15013 1369 aa14.98□□□□□ -0.01
CHFR-220ENST00000541817 SPATA31A1Q5TZJ5 1347 aa14.96□□□□□ -0.01
CHFR-220ENST00000541817 ANO8Q9HCE9 1232 aaPredicted RBP14.96□□□□□ -0.01
CHFR-220ENST00000541817 PPLO60437 1756 aa14.96□□□□□ -0.02
CHFR-220ENST00000541817 CEP350Q5VT06 3117 aa14.95□□□□□ -0.02
CHFR-220ENST00000541817 IFT172Q9UG01 1749 aa14.95□□□□□ -0.02
CHFR-220ENST00000541817 GIGYF1O75420 1035 aaPredicted RBP14.95□□□□□ -0.02
CHFR-220ENST00000541817 CHRNA2Q15822 529 aa14.95□□□□□ -0.02
CHFR-220ENST00000541817 FHDC1Q9C0D6 1143 aaPredicted RBP14.95□□□□□ -0.02
CHFR-220ENST00000541817 ADGRF5Q8IZF2 1346 aa14.94□□□□□ -0.02
CHFR-220ENST00000541817 PTGER2P43116 358 aa14.94□□□□□ -0.02
CHFR-220ENST00000541817 PDE3BQ13370 1112 aa14.94□□□□□ -0.02
CHFR-220ENST00000541817 NRXN1Q9ULB1 1477 aa14.94□□□□□ -0.02
CHFR-220ENST00000541817 CASZ1Q86V15 1759 aa14.93□□□□□ -0.02
CHFR-220ENST00000541817 SAFB2Q14151 953 aaKnown RBP eCLIP14.93□□□□□ -0.02
CHFR-220ENST00000541817 SYT17Q9BSW7 474 aa14.93□□□□□ -0.02
CHFR-220ENST00000541817 PRDM11Q9NQV5 511 aa14.93□□□□□ -0.02
CHFR-220ENST00000541817 ROCK1Q13464 1354 aa14.93□□□□□ -0.02
CHFR-220ENST00000541817 UTRNP46939 3433 aa14.93□□□□□ -0.02
CHFR-220ENST00000541817 TECPR2O15040 1411 aa14.92□□□□□ -0.02
CHFR-220ENST00000541817 RRBP1Q9P2E9 1410 aaKnown RBP14.91□□□□□ -0.02
CHFR-220ENST00000541817 RPGRIP1LQ68CZ1 1315 aa14.91□□□□□ -0.02
CHFR-220ENST00000541817 TRPM3Q9HCF6 1732 aaPredicted RBP14.9□□□□□ -0.02
CHFR-220ENST00000541817 ABCC11Q96J66 1382 aa14.89□□□□□ -0.03
CHFR-220ENST00000541817 PTF1AQ7RTS3 328 aa14.89□□□□□ -0.03
CHFR-220ENST00000541817 ALS2Q96Q42 1657 aa14.88□□□□□ -0.03
CHFR-220ENST00000541817 KNDC1Q76NI1 1749 aa14.88□□□□□ -0.03
CHFR-220ENST00000541817 KIAA0232Q92628 1395 aa14.87□□□□□ -0.03
CHFR-220ENST00000541817 PAK3O75914 559 aaPredicted RBP14.87□□□□□ -0.03
CHFR-220ENST00000541817 ZC3H6P61129 1189 aaKnown RBP14.87□□□□□ -0.03
CHFR-220ENST00000541817 RGL3Q3MIN7 710 aa14.87□□□□□ -0.03
CHFR-220ENST00000541817 BCL11BQ9C0K0 894 aaPredicted RBP14.87□□□□□ -0.03
CHFR-220ENST00000541817 CRYBG1Q9Y4K1 1723 aa14.86□□□□□ -0.03
CHFR-220ENST00000541817 EVA1CP58658 441 aa14.86□□□□□ -0.03
CHFR-220ENST00000541817 GPR162Q16538 588 aa14.85□□□□□ -0.03
CHFR-220ENST00000541817 YTHDC2Q9H6S0 1430 aaKnown RBP14.84□□□□□ -0.03
CHFR-220ENST00000541817 NUTM2GQ5VZR2 741 aa14.84□□□□□ -0.03
CHFR-220ENST00000541817 LARP1Q6PKG0 1096 aaKnown RBP14.84□□□□□ -0.03
CHFR-220ENST00000541817 BARGINQ6ZT62 677 aa14.84□□□□□ -0.03
CHFR-220ENST00000541817 PROM2Q8N271 834 aa14.84□□□□□ -0.03
CHFR-220ENST00000541817 PELP1Q8IZL8 1130 aaKnown RBP14.83□□□□□ -0.04
CHFR-220ENST00000541817 ACIN1Q9UKV3 1341 aaKnown RBP14.82□□□□□ -0.04
CHFR-220ENST00000541817 GPRASP1Q5JY77 1395 aa14.82□□□□□ -0.04
CHFR-220ENST00000541817 PLSCR1O15162 318 aa14.81□□□□□ -0.04
CHFR-220ENST00000541817 PRAM1Q96QH2 718 aa14.81□□□□□ -0.04
CHFR-220ENST00000541817 HIRIP3Q9BW71 556 aaPredicted RBP14.81□□□□□ -0.04
CHFR-220ENST00000541817 SSH2Q76I76 1423 aa14.81□□□□□ -0.04
CHFR-220ENST00000541817 DLC1Q96QB1 1528 aa14.81□□□□□ -0.04
CHFR-220ENST00000541817 SHANK3Q9BYB0 1731 aa14.8□□□□□ -0.04
CHFR-220ENST00000541817 SBF2Q86WG5 1849 aa14.8□□□□□ -0.04
CHFR-220ENST00000541817 KLHL34Q8N239 644 aa14.8□□□□□ -0.04
CHFR-220ENST00000541817 TCP11L2Q8N4U5 519 aa14.8□□□□□ -0.04
CHFR-220ENST00000541817 SGIP1Q9BQI5 828 aa14.8□□□□□ -0.04
CHFR-220ENST00000541817 ARXQ96QS3 562 aa14.79□□□□□ -0.04
CHFR-220ENST00000541817 PRR36Q9H6K5 1346 aa14.79□□□□□ -0.04
CHFR-220ENST00000541817 STK32BQ9NY57 414 aa14.79□□□□□ -0.04
CHFR-220ENST00000541817 NGDNQ8NEJ9 315 aaKnown RBP14.78□□□□□ -0.04
CHFR-220ENST00000541817 PHRF1Q9P1Y6 1649 aaKnown RBP14.77□□□□□ -0.04
CHFR-220ENST00000541817 SLC15A2Q16348 729 aa14.77□□□□□ -0.05
CHFR-220ENST00000541817 SIRT1Q96EB6 747 aa14.77□□□□□ -0.05
CHFR-220ENST00000541817 MTFR1LQ9H019 292 aa14.77□□□□□ -0.05
CHFR-220ENST00000541817 PEAK1Q9H792 1746 aa14.77□□□□□ -0.05
CHFR-220ENST00000541817 RGPD3A6NKT7 1758 aaPredicted RBP14.76□□□□□ -0.05
CHFR-220ENST00000541817 RGPD4Q7Z3J3 1758 aa14.76□□□□□ -0.05
CHFR-220ENST00000541817 POGKQ9P215 609 aa14.76□□□□□ -0.05
CHFR-220ENST00000541817 ANKARQ7Z5J8 1434 aa14.75□□□□□ -0.05
CHFR-220ENST00000541817 CAPN15O75808 1086 aa14.75□□□□□ -0.05
CHFR-220ENST00000541817 CFAP70Q5T0N1 1121 aa14.75□□□□□ -0.05
CHFR-220ENST00000541817 PARP4Q9UKK3 1724 aaKnown RBP14.75□□□□□ -0.05
CHFR-220ENST00000541817 OVOS2A0A0G2JMS6 1433 aa14.75□□□□□ -0.05
CHFR-220ENST00000541817 OVOS2A0A0J9YW53 1432 aa14.75□□□□□ -0.05
CHFR-220ENST00000541817 OVOS2Q6IE36 1432 aa14.75□□□□□ -0.05
CHFR-220ENST00000541817 MINK1Q8N4C8 1332 aaPredicted RBP14.74□□□□□ -0.05
CHFR-220ENST00000541817 TXNRD1Q16881 649 aa14.74□□□□□ -0.05
CHFR-220ENST00000541817 SLC4A1APQ9BWU0 796 aaKnown RBP14.74□□□□□ -0.05
CHFR-220ENST00000541817 PIK3C2GO75747 1445 aa14.74□□□□□ -0.05
CHFR-220ENST00000541817 PPARGC1BQ86YN6 1023 aaKnown RBP14.73□□□□□ -0.05
CHFR-220ENST00000541817 ZBTB7CA1YPR0 619 aa14.72□□□□□ -0.05
CHFR-220ENST00000541817 HSPA6P17066 643 aa14.72□□□□□ -0.05
CHFR-220ENST00000541817 DHX57Q6P158 1386 aaKnown RBP14.72□□□□□ -0.05
CHFR-220ENST00000541817 ZNF526Q8TF50 670 aaPredicted RBP14.71□□□□□ -0.05
CHFR-220ENST00000541817 C14orf93Q9H972 538 aaKnown RBP14.71□□□□□ -0.05
CHFR-220ENST00000541817 ANKRD30BQ9BXX2 1392 aa14.71□□□□□ -0.06
CHFR-220ENST00000541817 DDB1Q16531 1140 aa14.7□□□□□ -0.06
CHFR-220ENST00000541817 MARCH10Q8NA82 808 aaPredicted RBP14.7□□□□□ -0.06
CHFR-220ENST00000541817 NLGN2Q8NFZ4 835 aa14.7□□□□□ -0.06
CHFR-220ENST00000541817 THRAP3Q9Y2W1 955 aaKnown RBP14.7□□□□□ -0.06
CHFR-220ENST00000541817 SPATA31E1Q6ZUB1 1445 aa14.69□□□□□ -0.06
CHFR-220ENST00000541817 LMO7Q8WWI1 1683 aa14.69□□□□□ -0.06
CHFR-220ENST00000541817 TRAK1Q9UPV9 953 aa14.69□□□□□ -0.06
CHFR-220ENST00000541817 LRRC37A3O60309 1634 aa14.69□□□□□ -0.06
CHFR-220ENST00000541817 ATP7BP35670 1465 aa14.69□□□□□ -0.06
CHFR-220ENST00000541817 ATP10DQ9P241 1426 aa14.67□□□□□ -0.06
CHFR-220ENST00000541817 C11orf95C9JLR9 678 aaPredicted RBP14.67□□□□□ -0.06
CHFR-220ENST00000541817 YBX3P16989 372 aaKnown RBP eCLIP14.67□□□□□ -0.06
CHFR-220ENST00000541817 MAP3K5Q99683 1374 aa14.67□□□□□ -0.06
CHFR-220ENST00000541817 TULP4Q9NRJ4 1543 aa14.66□□□□□ -0.06
CHFR-220ENST00000541817 WASLO00401 505 aaPredicted RBP14.66□□□□□ -0.06
CHFR-220ENST00000541817 GOLGB1Q14789 3259 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms