RNA–Protein interactions for RNA: ENST00000541496.1

SPARCL1-209, Transcript of SPARC like 1, humanhuman

TSL 2

Gene SPARCL1, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-209ENST00000541496 UBR1Q8IWV7 1749 aa7.13□□□□□ -1.27
SPARCL1-209ENST00000541496 ADAMTS13Q76LX8 1427 aa7.12□□□□□ -1.27
SPARCL1-209ENST00000541496 GPRASP1Q5JY77 1395 aa7.12□□□□□ -1.27
SPARCL1-209ENST00000541496 EMP3P54852 163 aa7.12□□□□□ -1.27
SPARCL1-209ENST00000541496 NBPF8Q3BBV2 869 aa7.12□□□□□ -1.27
SPARCL1-209ENST00000541496 SETD1BQ9UPS6 1966 aaKnown RBP7.11□□□□□ -1.27
SPARCL1-209ENST00000541496 NPHP4O75161 1426 aaPredicted RBP7.11□□□□□ -1.27
SPARCL1-209ENST00000541496 PIK3R4Q99570 1358 aa7.11□□□□□ -1.27
SPARCL1-209ENST00000541496 NCKAP5LQ9HCH0 1330 aa7.11□□□□□ -1.27
SPARCL1-209ENST00000541496 PPP1R37O75864 691 aa7.11□□□□□ -1.27
SPARCL1-209ENST00000541496 NUTM2DQ5VT03 806 aaPredicted RBP7.11□□□□□ -1.27
SPARCL1-209ENST00000541496 SETBP1Q9Y6X0 1596 aa7.11□□□□□ -1.27
SPARCL1-209ENST00000541496 CFAP70Q5T0N1 1121 aa7.1□□□□□ -1.27
SPARCL1-209ENST00000541496 SPRYD3Q8NCJ5 442 aa7.1□□□□□ -1.27
SPARCL1-209ENST00000541496 RALGAPBQ86X10 1494 aa7.1□□□□□ -1.27
SPARCL1-209ENST00000541496 TMC2Q8TDI7 906 aa7.09□□□□□ -1.27
SPARCL1-209ENST00000541496 ROCK2O75116 1388 aaKnown RBP7.08□□□□□ -1.28
SPARCL1-209ENST00000541496 METP08581 1390 aa7.08□□□□□ -1.28
SPARCL1-209ENST00000541496 LRPPRCP42704 1394 aaKnown RBP7.08□□□□□ -1.28
SPARCL1-209ENST00000541496 ABCC11Q96J66 1382 aa7.08□□□□□ -1.28
SPARCL1-209ENST00000541496 DIP2AQ14689 1571 aa7.08□□□□□ -1.28
SPARCL1-209ENST00000541496 DOK7Q18PE1 504 aa7.08□□□□□ -1.28
SPARCL1-209ENST00000541496 NBPF1Q3BBV0 1214 aa7.08□□□□□ -1.28
SPARCL1-209ENST00000541496 SIRT1Q96EB6 747 aa7.08□□□□□ -1.28
SPARCL1-209ENST00000541496 SLC26A8Q96RN1 970 aa7.08□□□□□ -1.28
SPARCL1-209ENST00000541496 TECPR2O15040 1411 aa7.08□□□□□ -1.28
SPARCL1-209ENST00000541496 ADGRB1O14514 1584 aa7.08□□□□□ -1.28
SPARCL1-209ENST00000541496 KIF1BO60333 1816 aa7.07□□□□□ -1.28
SPARCL1-209ENST00000541496 FAM205CA6NFA0 338 aa7.07□□□□□ -1.28
SPARCL1-209ENST00000541496 KIF3CO14782 793 aa7.07□□□□□ -1.28
SPARCL1-209ENST00000541496 RIMBP2O15034 1052 aa7.07□□□□□ -1.28
SPARCL1-209ENST00000541496 KCNA6P17658 529 aa7.07□□□□□ -1.28
SPARCL1-209ENST00000541496 ZNF710Q8N1W2 664 aa7.07□□□□□ -1.28
SPARCL1-209ENST00000541496 BCANQ96GW7 911 aa7.07□□□□□ -1.28
SPARCL1-209ENST00000541496 CARD11Q9BXL7 1154 aa7.07□□□□□ -1.28
SPARCL1-209ENST00000541496 ALKQ9UM73 1620 aa7.07□□□□□ -1.28
SPARCL1-209ENST00000541496 TMEM132EQ6IEE7 984 aa7.06□□□□□ -1.28
SPARCL1-209ENST00000541496 TMEM92Q6UXU6 159 aa7.06□□□□□ -1.28
SPARCL1-209ENST00000541496 YTHDC2Q9H6S0 1430 aaKnown RBP7.06□□□□□ -1.28
SPARCL1-209ENST00000541496 IFT172Q9UG01 1749 aa7.06□□□□□ -1.28
SPARCL1-209ENST00000541496 ASXL1Q8IXJ9 1541 aa7.06□□□□□ -1.28
SPARCL1-209ENST00000541496 PPLO60437 1756 aa7.05□□□□□ -1.28
SPARCL1-209ENST00000541496 NRXN3Q9Y4C0 1643 aa7.05□□□□□ -1.28
SPARCL1-209ENST00000541496 PTCH1Q13635 1447 aa7.05□□□□□ -1.28
SPARCL1-209ENST00000541496 FAM135BQ49AJ0 1406 aa7.05□□□□□ -1.28
SPARCL1-209ENST00000541496 PTPRUQ92729 1446 aa7.05□□□□□ -1.28
SPARCL1-209ENST00000541496 AMOTL2Q9Y2J4 779 aa7.05□□□□□ -1.28
SPARCL1-209ENST00000541496 C2orf72A6NCS6 295 aa7.04□□□□□ -1.28
SPARCL1-209ENST00000541496 HOXB3P14651 431 aaPredicted RBP7.04□□□□□ -1.28
SPARCL1-209ENST00000541496 HS3ST6Q96QI5 342 aa7.04□□□□□ -1.28
SPARCL1-209ENST00000541496 ZSWIM6Q9HCJ5 1215 aa7.04□□□□□ -1.28
SPARCL1-209ENST00000541496 GPHNQ9NQX3 736 aaPredicted RBP7.04□□□□□ -1.28
SPARCL1-209ENST00000541496 DLC1Q96QB1 1528 aa7.04□□□□□ -1.28
SPARCL1-209ENST00000541496 LAMC1P11047 1609 aa7.04□□□□□ -1.28
SPARCL1-209ENST00000541496 EIF3AQ14152 1382 aaKnown RBP7.04□□□□□ -1.28
SPARCL1-209ENST00000541496 USP47Q96K76 1375 aa7.04□□□□□ -1.28
SPARCL1-209ENST00000541496 SBNO2Q9Y2G9 1366 aa7.04□□□□□ -1.28
SPARCL1-209ENST00000541496 NKTRP30414 1462 aaKnown RBP7.04□□□□□ -1.28
SPARCL1-209ENST00000541496 NCOA3Q9Y6Q9 1424 aa7.03□□□□□ -1.28
SPARCL1-209ENST00000541496 SLC24A1O60721 1099 aa7.03□□□□□ -1.28
SPARCL1-209ENST00000541496 PDE4AP27815 886 aa7.03□□□□□ -1.28
SPARCL1-209ENST00000541496 EIF4G2P78344 907 aaKnown RBP eCLIP7.03□□□□□ -1.28
SPARCL1-209ENST00000541496 PAXIP1Q6ZW49 1069 aaPredicted RBP7.03□□□□□ -1.28
SPARCL1-209ENST00000541496 ROBO2Q9HCK4 1378 aa7.03□□□□□ -1.28
SPARCL1-209ENST00000541496 CFAP65Q6ZU64 1925 aaKnown RBP7.03□□□□□ -1.28
SPARCL1-209ENST00000541496 IQGAP1P46940 1657 aa7.03□□□□□ -1.28
SPARCL1-209ENST00000541496 TRPM1Q7Z4N2 1603 aa7.02□□□□□ -1.29
SPARCL1-209ENST00000541496 KIAA1210Q9ULL0 1709 aa7.02□□□□□ -1.29
SPARCL1-209ENST00000541496 FOXK1P85037 733 aa7.02□□□□□ -1.29
SPARCL1-209ENST00000541496 CFAP44Q96MT7 982 aa7.02□□□□□ -1.29
SPARCL1-209ENST00000541496 CRISPLD2Q9H0B8 497 aa7.02□□□□□ -1.29
SPARCL1-209ENST00000541496 STK26Q9P289 416 aa7.02□□□□□ -1.29
SPARCL1-209ENST00000541496 TRAK1Q9UPV9 953 aa7.02□□□□□ -1.29
SPARCL1-209ENST00000541496 NWD1Q149M9 1564 aa7.02□□□□□ -1.29
SPARCL1-209ENST00000541496 ZNF335Q9H4Z2 1342 aaPredicted RBP7.01□□□□□ -1.29
SPARCL1-209ENST00000541496 CENPJQ9HC77 1338 aaPredicted RBP7.01□□□□□ -1.29
SPARCL1-209ENST00000541496 STRCQ7RTU9 1775 aa7.01□□□□□ -1.29
SPARCL1-209ENST00000541496 ST20-MTHFSA0A0A6YYL1 179 aa7.01□□□□□ -1.29
SPARCL1-209ENST00000541496 POTEB3A0JP26 581 aa7.01□□□□□ -1.29
SPARCL1-209ENST00000541496 POTEBQ6S5H4 581 aa7.01□□□□□ -1.29
SPARCL1-209ENST00000541496 PRAM1Q96QH2 718 aa7.01□□□□□ -1.29
SPARCL1-209ENST00000541496 TESK2Q96S53 571 aa7.01□□□□□ -1.29
SPARCL1-209ENST00000541496 CPS1P31327 1500 aa7.01□□□□□ -1.29
SPARCL1-209ENST00000541496 PLEKHH1Q9ULM0 1364 aa7□□□□□ -1.29
SPARCL1-209ENST00000541496 MYO5BQ9ULV0 1848 aa7□□□□□ -1.29
SPARCL1-209ENST00000541496 SLC34A2O95436 690 aa7□□□□□ -1.29
SPARCL1-209ENST00000541496 HSPA5P11021 654 aaKnown RBP7□□□□□ -1.29
SPARCL1-209ENST00000541496 WAPLQ7Z5K2 1190 aa7□□□□□ -1.29
SPARCL1-209ENST00000541496 SPNS2Q8IVW8 549 aa7□□□□□ -1.29
SPARCL1-209ENST00000541496 PUS7Q96PZ0 661 aaKnown RBP7□□□□□ -1.29
SPARCL1-209ENST00000541496 POGKQ9P215 609 aa7□□□□□ -1.29
SPARCL1-209ENST00000541496 SETD1AO15047 1707 aaKnown RBP7□□□□□ -1.29
SPARCL1-209ENST00000541496 POLR1AO95602 1720 aaPredicted RBP7□□□□□ -1.29
SPARCL1-209ENST00000541496 ERBB3P21860 1342 aa7□□□□□ -1.29
SPARCL1-209ENST00000541496 XRN1Q8IZH2 1706 aaKnown RBP6.99□□□□□ -1.29
SPARCL1-209ENST00000541496 TMEM94Q12767 1356 aa6.99□□□□□ -1.29
SPARCL1-209ENST00000541496 HOXB1P14653 301 aaPredicted RBP6.99□□□□□ -1.29
SPARCL1-209ENST00000541496 MMRN1Q13201 1228 aa6.99□□□□□ -1.29
SPARCL1-209ENST00000541496 PROSER2Q86WR7 435 aaPredicted RBP6.99□□□□□ -1.29
SPARCL1-209ENST00000541496 C19orf44Q9H6X5 657 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms