RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 WAPLQ7Z5K2 1190 aa14.47□□□□□ -0.09
YBX3-211ENST00000541351 GPRASP1Q5JY77 1395 aa14.47□□□□□ -0.09
YBX3-211ENST00000541351 DLC1Q96QB1 1528 aa14.46□□□□□ -0.09
YBX3-211ENST00000541351 PLSCR1O15162 318 aa14.46□□□□□ -0.09
YBX3-211ENST00000541351 STK26Q9P289 416 aa14.46□□□□□ -0.09
YBX3-211ENST00000541351 ABCC11Q96J66 1382 aa14.46□□□□□ -0.1
YBX3-211ENST00000541351 ZBTB7AO95365 584 aa14.45□□□□□ -0.1
YBX3-211ENST00000541351 GPR162Q16538 588 aa14.45□□□□□ -0.1
YBX3-211ENST00000541351 BCL11BQ9C0K0 894 aaPredicted RBP14.45□□□□□ -0.1
YBX3-211ENST00000541351 CLTCL1P53675 1640 aa14.44□□□□□ -0.1
YBX3-211ENST00000541351 CEP350Q5VT06 3117 aa14.44□□□□□ -0.1
YBX3-211ENST00000541351 UTRNP46939 3433 aa14.43□□□□□ -0.1
YBX3-211ENST00000541351 PTGER2P43116 358 aa14.43□□□□□ -0.1
YBX3-211ENST00000541351 EVA1CP58658 441 aa14.43□□□□□ -0.1
YBX3-211ENST00000541351 SIRT1Q96EB6 747 aa14.43□□□□□ -0.1
YBX3-211ENST00000541351 MTFR1LQ9H019 292 aa14.43□□□□□ -0.1
YBX3-211ENST00000541351 STRN4Q9NRL3 753 aa14.43□□□□□ -0.1
YBX3-211ENST00000541351 STK32BQ9NY57 414 aa14.42□□□□□ -0.1
YBX3-211ENST00000541351 ATF5Q9Y2D1 282 aaPredicted RBP14.42□□□□□ -0.1
YBX3-211ENST00000541351 USP35Q9P2H5 1018 aa14.41□□□□□ -0.1
YBX3-211ENST00000541351 THRAP3Q9Y2W1 955 aaKnown RBP14.41□□□□□ -0.1
YBX3-211ENST00000541351 MAP3K5Q99683 1374 aa14.41□□□□□ -0.1
YBX3-211ENST00000541351 MYOM1P52179 1685 aa14.41□□□□□ -0.1
YBX3-211ENST00000541351 RGPD3A6NKT7 1758 aaPredicted RBP14.41□□□□□ -0.1
YBX3-211ENST00000541351 RGPD4Q7Z3J3 1758 aa14.41□□□□□ -0.1
YBX3-211ENST00000541351 HSPA6P17066 643 aa14.4□□□□□ -0.1
YBX3-211ENST00000541351 TCP11L2Q8N4U5 519 aa14.4□□□□□ -0.1
YBX3-211ENST00000541351 ANKARQ7Z5J8 1434 aa14.4□□□□□ -0.1
YBX3-211ENST00000541351 CASZ1Q86V15 1759 aa14.39□□□□□ -0.11
YBX3-211ENST00000541351 EIF3AQ14152 1382 aaKnown RBP14.39□□□□□ -0.11
YBX3-211ENST00000541351 ARXQ96QS3 562 aa14.39□□□□□ -0.11
YBX3-211ENST00000541351 OVOS2A0A0G2JMS6 1433 aa14.39□□□□□ -0.11
YBX3-211ENST00000541351 OVOS2A0A0J9YW53 1432 aa14.39□□□□□ -0.11
YBX3-211ENST00000541351 OVOS2Q6IE36 1432 aa14.39□□□□□ -0.11
YBX3-211ENST00000541351 KNDC1Q76NI1 1749 aa14.38□□□□□ -0.11
YBX3-211ENST00000541351 PLEKHH1Q9ULM0 1364 aa14.37□□□□□ -0.11
YBX3-211ENST00000541351 PMFBP1Q8TBY8 1022 aa14.37□□□□□ -0.11
YBX3-211ENST00000541351 ANO8Q9HCE9 1232 aaPredicted RBP14.37□□□□□ -0.11
YBX3-211ENST00000541351 KIAA0232Q92628 1395 aa14.35□□□□□ -0.11
YBX3-211ENST00000541351 ANKRD30BQ9BXX2 1392 aa14.35□□□□□ -0.11
YBX3-211ENST00000541351 GRIN3BO60391 1043 aa14.35□□□□□ -0.11
YBX3-211ENST00000541351 PAK3O75914 559 aaPredicted RBP14.35□□□□□ -0.11
YBX3-211ENST00000541351 IFT172Q9UG01 1749 aa14.35□□□□□ -0.11
YBX3-211ENST00000541351 DHX57Q6P158 1386 aaKnown RBP14.34□□□□□ -0.11
YBX3-211ENST00000541351 PPLO60437 1756 aa14.34□□□□□ -0.11
YBX3-211ENST00000541351 SSH2Q76I76 1423 aa14.34□□□□□ -0.11
YBX3-211ENST00000541351 YTHDC2Q9H6S0 1430 aaKnown RBP14.34□□□□□ -0.11
YBX3-211ENST00000541351 SLC15A2Q16348 729 aa14.34□□□□□ -0.11
YBX3-211ENST00000541351 ACIN1Q9UKV3 1341 aaKnown RBP14.34□□□□□ -0.11
YBX3-211ENST00000541351 PELP1Q8IZL8 1130 aaKnown RBP14.33□□□□□ -0.12
YBX3-211ENST00000541351 GPBP1L1Q9HC44 474 aaPredicted RBP14.33□□□□□ -0.12
YBX3-211ENST00000541351 ALS2Q96Q42 1657 aa14.33□□□□□ -0.12
YBX3-211ENST00000541351 CHRNA2Q15822 529 aa14.32□□□□□ -0.12
YBX3-211ENST00000541351 TMEM132EQ6IEE7 984 aa14.32□□□□□ -0.12
YBX3-211ENST00000541351 NGDNQ8NEJ9 315 aaKnown RBP14.32□□□□□ -0.12
YBX3-211ENST00000541351 POLD1P28340 1107 aa14.31□□□□□ -0.12
YBX3-211ENST00000541351 SGIP1Q9BQI5 828 aa14.31□□□□□ -0.12
YBX3-211ENST00000541351 PDGFDQ9GZP0 370 aaPredicted RBP14.31□□□□□ -0.12
YBX3-211ENST00000541351 TRPM3Q9HCF6 1732 aaPredicted RBP14.31□□□□□ -0.12
YBX3-211ENST00000541351 RGPD8O14715 1765 aaPredicted RBP14.31□□□□□ -0.12
YBX3-211ENST00000541351 POGKQ9P215 609 aa14.3□□□□□ -0.12
YBX3-211ENST00000541351 ADGRF5Q8IZF2 1346 aa14.3□□□□□ -0.12
YBX3-211ENST00000541351 ZC3H6P61129 1189 aaKnown RBP14.29□□□□□ -0.12
YBX3-211ENST00000541351 DDB1Q16531 1140 aa14.29□□□□□ -0.12
YBX3-211ENST00000541351 TXNRD1Q16881 649 aa14.28□□□□□ -0.12
YBX3-211ENST00000541351 LARP1Q6PKG0 1096 aaKnown RBP14.28□□□□□ -0.12
YBX3-211ENST00000541351 KLHL34Q8N239 644 aa14.28□□□□□ -0.12
YBX3-211ENST00000541351 SHANK3Q9BYB0 1731 aa14.27□□□□□ -0.12
YBX3-211ENST00000541351 PARP4Q9UKK3 1724 aaKnown RBP14.27□□□□□ -0.12
YBX3-211ENST00000541351 ATP7BP35670 1465 aa14.27□□□□□ -0.12
YBX3-211ENST00000541351 APLP1P51693 650 aa14.27□□□□□ -0.13
YBX3-211ENST00000541351 PRAM1Q96QH2 718 aa14.27□□□□□ -0.13
YBX3-211ENST00000541351 AATKQ6ZMQ8 1374 aa14.26□□□□□ -0.13
YBX3-211ENST00000541351 ITGAEP38570 1179 aa14.26□□□□□ -0.13
YBX3-211ENST00000541351 SLC16A10Q8TF71 515 aa14.26□□□□□ -0.13
YBX3-211ENST00000541351 CDCA7Q9BWT1 371 aaPredicted RBP14.26□□□□□ -0.13
YBX3-211ENST00000541351 PIK3C2GO75747 1445 aa14.25□□□□□ -0.13
YBX3-211ENST00000541351 SAFB2Q14151 953 aaKnown RBP eCLIP14.25□□□□□ -0.13
YBX3-211ENST00000541351 PROM2Q8N271 834 aa14.25□□□□□ -0.13
YBX3-211ENST00000541351 BCL9O00512 1426 aa14.24□□□□□ -0.13
YBX3-211ENST00000541351 ATP10DQ9P241 1426 aa14.24□□□□□ -0.13
YBX3-211ENST00000541351 CRYBG1Q9Y4K1 1723 aa14.24□□□□□ -0.13
YBX3-211ENST00000541351 CPDO75976 1380 aa14.23□□□□□ -0.13
YBX3-211ENST00000541351 PRELPP51888 382 aa14.23□□□□□ -0.13
YBX3-211ENST00000541351 RGL3Q3MIN7 710 aa14.23□□□□□ -0.13
YBX3-211ENST00000541351 CRB1P82279 1406 aa14.23□□□□□ -0.13
YBX3-211ENST00000541351 CAPN15O75808 1086 aa14.22□□□□□ -0.13
YBX3-211ENST00000541351 SLC4A1APQ9BWU0 796 aaKnown RBP14.22□□□□□ -0.13
YBX3-211ENST00000541351 C14orf93Q9H972 538 aaKnown RBP14.21□□□□□ -0.13
YBX3-211ENST00000541351 PEAK1Q9H792 1746 aa14.21□□□□□ -0.14
YBX3-211ENST00000541351 TULP4Q9NRJ4 1543 aa14.2□□□□□ -0.14
YBX3-211ENST00000541351 PHRF1Q9P1Y6 1649 aaKnown RBP14.2□□□□□ -0.14
YBX3-211ENST00000541351 TNS4Q8IZW8 715 aa14.2□□□□□ -0.14
YBX3-211ENST00000541351 SBF2Q86WG5 1849 aa14.19□□□□□ -0.14
YBX3-211ENST00000541351 WASLO00401 505 aaPredicted RBP14.18□□□□□ -0.14
YBX3-211ENST00000541351 PCDH10Q9P2E7 1040 aa14.18□□□□□ -0.14
YBX3-211ENST00000541351 COL5A2P05997 1499 aaPredicted RBP14.18□□□□□ -0.14
YBX3-211ENST00000541351 SLC34A2O95436 690 aa14.17□□□□□ -0.14
YBX3-211ENST00000541351 TOM1L2Q6ZVM7 507 aa14.17□□□□□ -0.14
YBX3-211ENST00000541351 NLRP13Q86W25 1043 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms