RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 ALS2Q96Q42 1657 aa34.92■■■■□ 3.18
LEMD3-203ENST00000541171 SF3B2Q13435 895 aaKnown RBP34.91■■■■□ 3.18
LEMD3-203ENST00000541171 DEFB132Q7Z7B7 95 aa34.91■■■■□ 3.18
LEMD3-203ENST00000541171 FAM98CQ17RN3 349 aaKnown RBP34.9■■■■□ 3.18
LEMD3-203ENST00000541171 ARHGEF28Q8N1W1 1705 aaKnown RBP34.89■■■■□ 3.18
LEMD3-203ENST00000541171 CDK19Q9BWU1 502 aa34.89■■■■□ 3.18
LEMD3-203ENST00000541171 ATP7BP35670 1465 aa34.85■■■■□ 3.17
LEMD3-203ENST00000541171 PRDM11Q9NQV5 511 aa34.84■■■■□ 3.17
LEMD3-203ENST00000541171 COL14A1Q05707 1796 aaKnown RBP34.84■■■■□ 3.17
LEMD3-203ENST00000541171 NRAPQ86VF7 1730 aa34.84■■■■□ 3.17
LEMD3-203ENST00000541171 NBPF1Q3BBV0 1214 aa34.82■■■■□ 3.16
LEMD3-203ENST00000541171 NUTM2GQ5VZR2 741 aa34.81■■■■□ 3.16
LEMD3-203ENST00000541171 SRCAPQ6ZRS2 3230 aa34.81■■■■□ 3.16
LEMD3-203ENST00000541171 ITSN1Q15811 1721 aa34.8■■■■□ 3.16
LEMD3-203ENST00000541171 ACEP12821 1306 aa34.78■■■■□ 3.16
LEMD3-203ENST00000541171 SPATA31A5Q5VU36 1347 aa34.78■■■■□ 3.16
LEMD3-203ENST00000541171 SPATA31A7Q8IWB4 1347 aa34.78■■■■□ 3.16
LEMD3-203ENST00000541171 CHRNA2Q15822 529 aa34.77■■■■□ 3.16
LEMD3-203ENST00000541171 CCDC61Q9Y6R9 512 aa34.77■■■■□ 3.16
LEMD3-203ENST00000541171 NBPF8Q3BBV2 869 aa34.76■■■■□ 3.16
LEMD3-203ENST00000541171 KIAA0232Q92628 1395 aa34.75■■■■□ 3.15
LEMD3-203ENST00000541171 CRYBG1Q9Y4K1 1723 aa34.75■■■■□ 3.15
LEMD3-203ENST00000541171 ZC3H6P61129 1189 aaKnown RBP34.75■■■■□ 3.15
LEMD3-203ENST00000541171 FAM182BQ5T319 152 aa34.74■■■■□ 3.15
LEMD3-203ENST00000541171 STRN4Q9NRL3 753 aa34.73■■■■□ 3.15
LEMD3-203ENST00000541171 POLR3AO14802 1390 aaPredicted RBP34.72■■■■□ 3.15
LEMD3-203ENST00000541171 KIAA1210Q9ULL0 1709 aa34.72■■■■□ 3.15
LEMD3-203ENST00000541171 PLEKHG3A1L390 1219 aa34.71■■■■□ 3.15
LEMD3-203ENST00000541171 BAG6P46379 1132 aa34.7■■■■□ 3.15
LEMD3-203ENST00000541171 SRPK2P78362 688 aaKnown RBP34.69■■■■□ 3.14
LEMD3-203ENST00000541171 ABTB2Q8N961 1025 aa34.68■■■■□ 3.14
LEMD3-203ENST00000541171 TOPAZ1Q8N9V7 1692 aa34.66■■■■□ 3.14
LEMD3-203ENST00000541171 CENPJQ9HC77 1338 aaPredicted RBP34.66■■■■□ 3.14
LEMD3-203ENST00000541171 CABP2Q9NPB3 220 aa34.66■■■■□ 3.14
LEMD3-203ENST00000541171 SPATA31A1Q5TZJ5 1347 aa34.65■■■■□ 3.14
LEMD3-203ENST00000541171 PHRF1Q9P1Y6 1649 aaKnown RBP34.65■■■■□ 3.14
LEMD3-203ENST00000541171 EVA1CP58658 441 aa34.63■■■■□ 3.13
LEMD3-203ENST00000541171 USP35Q9P2H5 1018 aa34.63■■■■□ 3.13
LEMD3-203ENST00000541171 EN1Q05925 392 aaPredicted RBP34.61■■■■□ 3.13
LEMD3-203ENST00000541171 PPIP5K1Q6PFW1 1433 aa34.61■■■■□ 3.13
LEMD3-203ENST00000541171 PSDA5PKW4 1024 aaPredicted RBP34.59■■■■□ 3.13
LEMD3-203ENST00000541171 L3MBTL2Q969R5 705 aa34.59■■■■□ 3.13
LEMD3-203ENST00000541171 THSD7AQ9UPZ6 1657 aa34.59■■■■□ 3.13
LEMD3-203ENST00000541171 NLRP13Q86W25 1043 aa34.56■■■■□ 3.12
LEMD3-203ENST00000541171 SIN3AQ96ST3 1273 aa34.54■■■■□ 3.12
LEMD3-203ENST00000541171 SSH2Q76I76 1423 aa34.54■■■■□ 3.12
LEMD3-203ENST00000541171 USP19O94966 1318 aa34.54■■■■□ 3.12
LEMD3-203ENST00000541171 LARP1Q6PKG0 1096 aaKnown RBP34.53■■■■□ 3.12
LEMD3-203ENST00000541171 CABP1Q9NZU7 370 aa34.53■■■■□ 3.12
LEMD3-203ENST00000541171 NRKQ7Z2Y5 1582 aa34.53■■■■□ 3.12
LEMD3-203ENST00000541171 GCP02774 474 aa34.52■■■■□ 3.12
LEMD3-203ENST00000541171 RGPD1P0DJD0 1748 aa34.52■■■■□ 3.12
LEMD3-203ENST00000541171 CAMTA1Q9Y6Y1 1673 aa34.5■■■■□ 3.11
LEMD3-203ENST00000541171 ZBTB7CA1YPR0 619 aa34.5■■■■□ 3.11
LEMD3-203ENST00000541171 TRIM37O94972 964 aa34.5■■■■□ 3.11
LEMD3-203ENST00000541171 NEUROD1Q13562 356 aa34.5■■■■□ 3.11
LEMD3-203ENST00000541171 FAM196AQ6ZSG2 479 aa34.5■■■■□ 3.11
LEMD3-203ENST00000541171 QRICH2Q9H0J4 1663 aa34.5■■■■□ 3.11
LEMD3-203ENST00000541171 CPDO75976 1380 aa34.49■■■■□ 3.11
LEMD3-203ENST00000541171 PDE3BQ13370 1112 aa34.48■■■■□ 3.11
LEMD3-203ENST00000541171 BARGINQ6ZT62 677 aa34.48■■■■□ 3.11
LEMD3-203ENST00000541171 NLRP6P59044 892 aa34.46■■■■□ 3.11
LEMD3-203ENST00000541171 EZH2Q15910 746 aaKnown RBP34.46■■■■□ 3.11
LEMD3-203ENST00000541171 TCP11L2Q8N4U5 519 aa34.46■■■■□ 3.11
LEMD3-203ENST00000541171 EVC2Q86UK5 1308 aa34.44■■■■□ 3.1
LEMD3-203ENST00000541171 BRD4O60885 1362 aaPredicted RBP34.43■■■■□ 3.1
LEMD3-203ENST00000541171 USP6P35125 1406 aa34.43■■■■□ 3.1
LEMD3-203ENST00000541171 LMO7Q8WWI1 1683 aa34.42■■■■□ 3.1
LEMD3-203ENST00000541171 APBA3O96018 575 aa34.42■■■■□ 3.1
LEMD3-203ENST00000541171 R3HDM1Q15032 1099 aaKnown RBP34.42■■■■□ 3.1
LEMD3-203ENST00000541171 DISP2A7MBM2 1401 aa34.41■■■■□ 3.1
LEMD3-203ENST00000541171 TNS1Q9HBL0 1735 aaKnown RBP34.41■■■■□ 3.1
LEMD3-203ENST00000541171 ROCK2O75116 1388 aaKnown RBP34.39■■■■□ 3.1
LEMD3-203ENST00000541171 CAMKK2Q96RR4 588 aa34.39■■■■□ 3.1
LEMD3-203ENST00000541171 THRAP3Q9Y2W1 955 aaKnown RBP34.38■■■■□ 3.09
LEMD3-203ENST00000541171 COL5A2P05997 1499 aaPredicted RBP34.37■■■■□ 3.09
LEMD3-203ENST00000541171 TRPM1Q7Z4N2 1603 aa34.36■■■■□ 3.09
LEMD3-203ENST00000541171 LRP5O75197 1615 aa34.35■■■■□ 3.09
LEMD3-203ENST00000541171 AATKQ6ZMQ8 1374 aa34.31■■■■□ 3.08
LEMD3-203ENST00000541171 CRB1P82279 1406 aa34.3■■■■□ 3.08
LEMD3-203ENST00000541171 SLIT3O75094 1523 aa34.3■■■■□ 3.08
LEMD3-203ENST00000541171 SOX12O15370 315 aa34.29■■■■□ 3.08
LEMD3-203ENST00000541171 ZNF692Q9BU19 519 aaPredicted RBP34.29■■■■□ 3.08
LEMD3-203ENST00000541171 TTC21BQ7Z4L5 1316 aa34.29■■■■□ 3.08
LEMD3-203ENST00000541171 TOM1L2Q6ZVM7 507 aa34.28■■■■□ 3.08
LEMD3-203ENST00000541171 PARD3Q8TEW0 1356 aa34.26■■■■□ 3.08
LEMD3-203ENST00000541171 PIK3C2AO00443 1686 aa34.26■■■■□ 3.08
LEMD3-203ENST00000541171 AXIN2Q9Y2T1 843 aa34.26■■■■□ 3.08
LEMD3-203ENST00000541171 KCNH5Q8NCM2 988 aa34.22■■■■□ 3.07
LEMD3-203ENST00000541171 PARP4Q9UKK3 1724 aaKnown RBP34.21■■■■□ 3.07
LEMD3-203ENST00000541171 DDB1Q16531 1140 aa34.21■■■■□ 3.07
LEMD3-203ENST00000541171 ARHGEF25Q86VW2 580 aa34.21■■■■□ 3.07
LEMD3-203ENST00000541171 TTC21AQ8NDW8 1320 aa34.2■■■■□ 3.07
LEMD3-203ENST00000541171 NBPF14Q5TI25 921 aa34.19■■■■□ 3.06
LEMD3-203ENST00000541171 WDR17Q8IZU2 1322 aa34.19■■■■□ 3.06
LEMD3-203ENST00000541171 KTN1Q86UP2 1357 aaKnown RBP34.19■■■■□ 3.06
LEMD3-203ENST00000541171 CPSF1Q10570 1443 aaKnown RBP34.19■■■■□ 3.06
LEMD3-203ENST00000541171 CSB-PGBD3P0DP91 1061 aa34.18■■■■□ 3.06
LEMD3-203ENST00000541171 COL18A1P39060 1754 aa34.18■■■■□ 3.06
LEMD3-203ENST00000541171 C11orf95C9JLR9 678 aaPredicted RBP34.17■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms