RNA–Protein interactions for RNA: ENST00000541124.5

PSME3-203, Transcript of proteasome activator subunit 3, humanhuman

TSL 1 (best) BASIC

Gene PSME3, Length 3,366 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-203ENST00000541124 TRIM35Q9UPQ4 493 aa17.46■□□□□ 0.39
PSME3-203ENST00000541124 SMARCA5O60264 1052 aaPredicted RBP17.46■□□□□ 0.39
PSME3-203ENST00000541124 MAST1Q9Y2H9 1570 aa17.46■□□□□ 0.39
PSME3-203ENST00000541124 PRPF40AO75400 957 aaKnown RBP17.46■□□□□ 0.39
PSME3-203ENST00000541124 SLC4A10Q6U841 1118 aa17.46■□□□□ 0.39
PSME3-203ENST00000541124 RBM27Q9P2N5 1060 aaKnown RBP17.46■□□□□ 0.39
PSME3-203ENST00000541124 KIF16BQ96L93 1317 aa17.46■□□□□ 0.39
PSME3-203ENST00000541124 NLRP1Q9C000 1473 aa17.45■□□□□ 0.38
PSME3-203ENST00000541124 DNTTIP2Q5QJE6 756 aaKnown RBP17.45■□□□□ 0.38
PSME3-203ENST00000541124 ZBTB40Q9NUA8 1239 aa17.45■□□□□ 0.38
PSME3-203ENST00000541124 ABCC2Q92887 1545 aa17.45■□□□□ 0.38
PSME3-203ENST00000541124 FAM83GA6ND36 823 aa17.44■□□□□ 0.38
PSME3-203ENST00000541124 PKP1Q13835 747 aa17.44■□□□□ 0.38
PSME3-203ENST00000541124 SMC5Q8IY18 1101 aa17.44■□□□□ 0.38
PSME3-203ENST00000541124 NUCB1Q02818 461 aa17.43■□□□□ 0.38
PSME3-203ENST00000541124 HDAC1Q13547 482 aaPredicted RBP17.43■□□□□ 0.38
PSME3-203ENST00000541124 PRAM1Q96QH2 718 aa17.43■□□□□ 0.38
PSME3-203ENST00000541124 AAMPQ13685 434 aa17.43■□□□□ 0.38
PSME3-203ENST00000541124 CABP1Q9NZU7 370 aa17.43■□□□□ 0.38
PSME3-203ENST00000541124 SYNMO15061 1565 aa17.43■□□□□ 0.38
PSME3-203ENST00000541124 PTPRTO14522 1441 aa17.43■□□□□ 0.38
PSME3-203ENST00000541124 NPC1L1Q9UHC9 1359 aa17.43■□□□□ 0.38
PSME3-203ENST00000541124 PLEKHG5O94827 1062 aa17.43■□□□□ 0.38
PSME3-203ENST00000541124 XPCQ01831 940 aaPredicted RBP17.42■□□□□ 0.38
PSME3-203ENST00000541124 UNC13BO14795 1591 aa17.42■□□□□ 0.38
PSME3-203ENST00000541124 TSHZ3Q63HK5 1081 aa17.42■□□□□ 0.38
PSME3-203ENST00000541124 TERF2IPQ9NYB0 399 aa17.42■□□□□ 0.38
PSME3-203ENST00000541124 HDGFL2Q7Z4V5 671 aaPredicted RBP17.41■□□□□ 0.38
PSME3-203ENST00000541124 OTUD7AQ8TE49 926 aaPredicted RBP17.41■□□□□ 0.38
PSME3-203ENST00000541124 PLPPR3Q6T4P5 718 aa17.41■□□□□ 0.38
PSME3-203ENST00000541124 STAC3Q96MF2 364 aa17.41■□□□□ 0.38
PSME3-203ENST00000541124 PLCH2O75038 1416 aa17.41■□□□□ 0.38
PSME3-203ENST00000541124 DTNBO60941 627 aa17.4■□□□□ 0.38
PSME3-203ENST00000541124 KRT24Q2M2I5 525 aa17.4■□□□□ 0.38
PSME3-203ENST00000541124 NECTIN2Q92692 538 aa17.4■□□□□ 0.38
PSME3-203ENST00000541124 PHACTR3Q96KR7 559 aa17.4■□□□□ 0.38
PSME3-203ENST00000541124 IQGAP3Q86VI3 1631 aa17.4■□□□□ 0.38
PSME3-203ENST00000541124 BAG4O95429 457 aaKnown RBP17.4■□□□□ 0.38
PSME3-203ENST00000541124 SKOR2Q2VWA4 1001 aaPredicted RBP17.39■□□□□ 0.37
PSME3-203ENST00000541124 ZGPATQ8N5A5 531 aaKnown RBP17.39■□□□□ 0.37
PSME3-203ENST00000541124 CDC45O75419 566 aa17.39■□□□□ 0.37
PSME3-203ENST00000541124 RAB3GAP1Q15042 981 aa17.39■□□□□ 0.37
PSME3-203ENST00000541124 KDM5AP29375 1690 aaKnown RBP17.39■□□□□ 0.37
PSME3-203ENST00000541124 TWISTNBQ3B726 338 aaPredicted RBP17.39■□□□□ 0.37
PSME3-203ENST00000541124 FYB1O15117 783 aa17.38■□□□□ 0.37
PSME3-203ENST00000541124 RRS1Q15050 365 aaKnown RBP17.38■□□□□ 0.37
PSME3-203ENST00000541124 EMILIN1Q9Y6C2 1016 aa17.38■□□□□ 0.37
PSME3-203ENST00000541124 MADDQ8WXG6 1647 aa17.38■□□□□ 0.37
PSME3-203ENST00000541124 ZNF692Q9BU19 519 aaPredicted RBP17.37■□□□□ 0.37
PSME3-203ENST00000541124 C14orf93Q9H972 538 aaKnown RBP17.37■□□□□ 0.37
PSME3-203ENST00000541124 NPM1P06748 294 aaKnown RBP eCLIP17.37■□□□□ 0.37
PSME3-203ENST00000541124 CCDC27Q2M243 656 aa17.37■□□□□ 0.37
PSME3-203ENST00000541124 MLECQ14165 292 aa17.36■□□□□ 0.37
PSME3-203ENST00000541124 BMP2KLQ5H9B9 411 aa17.36■□□□□ 0.37
PSME3-203ENST00000541124 ZRANB1Q9UGI0 708 aa17.36■□□□□ 0.37
PSME3-203ENST00000541124 SYCE3A1L190 88 aa17.36■□□□□ 0.37
PSME3-203ENST00000541124 VGFO15240 615 aaPredicted RBP17.36■□□□□ 0.37
PSME3-203ENST00000541124 MIS18AQ9NYP9 233 aa17.36■□□□□ 0.37
PSME3-203ENST00000541124 GDPD2Q9HCC8 539 aa17.36■□□□□ 0.37
PSME3-203ENST00000541124 RRP9O43818 475 aaKnown RBP17.35■□□□□ 0.37
PSME3-203ENST00000541124 RAPGEF3O95398 923 aa17.35■□□□□ 0.37
PSME3-203ENST00000541124 CLTCL1P53675 1640 aa17.35■□□□□ 0.37
PSME3-203ENST00000541124 TRIM6-TRIM34B2RNG4 842 aa17.35■□□□□ 0.37
PSME3-203ENST00000541124 RBM25P49756 843 aaKnown RBP17.35■□□□□ 0.37
PSME3-203ENST00000541124 CASC1Q6TDU7 716 aa17.35■□□□□ 0.37
PSME3-203ENST00000541124 RILPL2Q969X0 211 aa17.35■□□□□ 0.37
PSME3-203ENST00000541124 WAPLQ7Z5K2 1190 aa17.34■□□□□ 0.37
PSME3-203ENST00000541124 A0A1W2PP64 1363 aa17.34■□□□□ 0.37
PSME3-203ENST00000541124 C8orf58Q8NAV2 365 aa17.34■□□□□ 0.37
PSME3-203ENST00000541124 BCL11BQ9C0K0 894 aaPredicted RBP17.34■□□□□ 0.37
PSME3-203ENST00000541124 CCDC173Q0VFZ6 552 aa17.33■□□□□ 0.37
PSME3-203ENST00000541124 PHF23Q9BUL5 403 aaPredicted RBP17.33■□□□□ 0.37
PSME3-203ENST00000541124 PRIM1P49642 420 aaKnown RBP17.33■□□□□ 0.36
PSME3-203ENST00000541124 NEK4P51957 841 aa17.33■□□□□ 0.36
PSME3-203ENST00000541124 ZSCAN30Q86W11 494 aa17.33■□□□□ 0.36
PSME3-203ENST00000541124 ZBTB7BO15156 539 aaPredicted RBP17.32■□□□□ 0.36
PSME3-203ENST00000541124 GCC1Q96CN9 775 aa17.32■□□□□ 0.36
PSME3-203ENST00000541124 MBIPQ9NS73 344 aa17.32■□□□□ 0.36
PSME3-203ENST00000541124 PLXNC1O60486 1568 aa17.32■□□□□ 0.36
PSME3-203ENST00000541124 LARP6Q9BRS8 491 aaKnown RBP17.32■□□□□ 0.36
PSME3-203ENST00000541124 CDK19Q9BWU1 502 aa17.32■□□□□ 0.36
PSME3-203ENST00000541124 ST18O60284 1047 aa17.32■□□□□ 0.36
PSME3-203ENST00000541124 CIZ1Q9ULV3 898 aaPredicted RBP17.32■□□□□ 0.36
PSME3-203ENST00000541124 AK9Q5TCS8 1911 aa17.32■□□□□ 0.36
PSME3-203ENST00000541124 SNX21Q969T3 373 aa17.31■□□□□ 0.36
PSME3-203ENST00000541124 PLEKHF1Q96S99 279 aa17.31■□□□□ 0.36
PSME3-203ENST00000541124 KIF2CQ99661 725 aa17.31■□□□□ 0.36
PSME3-203ENST00000541124 CLASP1Q7Z460 1538 aa17.31■□□□□ 0.36
PSME3-203ENST00000541124 LAMC1P11047 1609 aa17.31■□□□□ 0.36
PSME3-203ENST00000541124 GSPT1P15170 499 aaKnown RBP17.31■□□□□ 0.36
PSME3-203ENST00000541124 CHD1O14646 1710 aa17.31■□□□□ 0.36
PSME3-203ENST00000541124 ZSCAN23Q3MJ62 389 aa17.31■□□□□ 0.36
PSME3-203ENST00000541124 SIRT2Q8IXJ6 389 aa17.31■□□□□ 0.36
PSME3-203ENST00000541124 CD109Q6YHK3 1445 aa17.3■□□□□ 0.36
PSME3-203ENST00000541124 CT47B1P0C2W7 299 aaPredicted RBP17.3■□□□□ 0.36
PSME3-203ENST00000541124 RBSNQ9H1K0 784 aa17.3■□□□□ 0.36
PSME3-203ENST00000541124 ZNF518AQ6AHZ1 1483 aa17.3■□□□□ 0.36
PSME3-203ENST00000541124 VAMP4O75379 141 aa17.3■□□□□ 0.36
PSME3-203ENST00000541124 PRDM10Q9NQV6 1147 aa17.3■□□□□ 0.36
PSME3-203ENST00000541124 IDI1Q13907 227 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms