RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 ABCA3Q99758 1704 aa18.25■□□□□ 0.51
COPS7A-211ENST00000540408 PRR36Q9H6K5 1346 aa18.24■□□□□ 0.51
COPS7A-211ENST00000540408 TULP4Q9NRJ4 1543 aa18.24■□□□□ 0.51
COPS7A-211ENST00000540408 COL14A1Q05707 1796 aaKnown RBP18.22■□□□□ 0.51
COPS7A-211ENST00000540408 NUDT16Q96DE0 195 aaKnown RBP18.22■□□□□ 0.51
COPS7A-211ENST00000540408 TRPM3Q9HCF6 1732 aaPredicted RBP18.22■□□□□ 0.51
COPS7A-211ENST00000540408 SPATA31A5Q5VU36 1347 aa18.22■□□□□ 0.51
COPS7A-211ENST00000540408 SPATA31A7Q8IWB4 1347 aa18.22■□□□□ 0.51
COPS7A-211ENST00000540408 ALS2Q96Q42 1657 aa18.2■□□□□ 0.5
COPS7A-211ENST00000540408 HRCP23327 699 aa18.2■□□□□ 0.5
COPS7A-211ENST00000540408 EN1Q05925 392 aaPredicted RBP18.19■□□□□ 0.5
COPS7A-211ENST00000540408 NRAPQ86VF7 1730 aa18.18■□□□□ 0.5
COPS7A-211ENST00000540408 CDK19Q9BWU1 502 aa18.18■□□□□ 0.5
COPS7A-211ENST00000540408 PSDA5PKW4 1024 aaPredicted RBP18.17■□□□□ 0.5
COPS7A-211ENST00000540408 EVA1CP58658 441 aa18.17■□□□□ 0.5
COPS7A-211ENST00000540408 FAM182BQ5T319 152 aa18.17■□□□□ 0.5
COPS7A-211ENST00000540408 STRN4Q9NRL3 753 aa18.17■□□□□ 0.5
COPS7A-211ENST00000540408 CCDC61Q9Y6R9 512 aa18.16■□□□□ 0.5
COPS7A-211ENST00000540408 KIAA0232Q92628 1395 aa18.16■□□□□ 0.5
COPS7A-211ENST00000540408 ZC3H6P61129 1189 aaKnown RBP18.15■□□□□ 0.5
COPS7A-211ENST00000540408 CHRNA2Q15822 529 aa18.15■□□□□ 0.5
COPS7A-211ENST00000540408 FAM196AQ6ZSG2 479 aa18.15■□□□□ 0.5
COPS7A-211ENST00000540408 SPATA31A1Q5TZJ5 1347 aa18.15■□□□□ 0.5
COPS7A-211ENST00000540408 NBPF8Q3BBV2 869 aa18.14■□□□□ 0.49
COPS7A-211ENST00000540408 NUTM2GQ5VZR2 741 aa18.14■□□□□ 0.49
COPS7A-211ENST00000540408 ITSN1Q15811 1721 aa18.14■□□□□ 0.49
COPS7A-211ENST00000540408 ATP7BP35670 1465 aa18.14■□□□□ 0.49
COPS7A-211ENST00000540408 ABTB2Q8N961 1025 aa18.13■□□□□ 0.49
COPS7A-211ENST00000540408 ACEP12821 1306 aa18.13■□□□□ 0.49
COPS7A-211ENST00000540408 PDE3BQ13370 1112 aa18.12■□□□□ 0.49
COPS7A-211ENST00000540408 USP35Q9P2H5 1018 aa18.12■□□□□ 0.49
COPS7A-211ENST00000540408 RGPD1P0DJD0 1748 aa18.12■□□□□ 0.49
COPS7A-211ENST00000540408 PLEKHG3A1L390 1219 aa18.11■□□□□ 0.49
COPS7A-211ENST00000540408 R3HDM1Q15032 1099 aaKnown RBP18.11■□□□□ 0.49
COPS7A-211ENST00000540408 LRP5O75197 1615 aa18.11■□□□□ 0.49
COPS7A-211ENST00000540408 ARHGEF28Q8N1W1 1705 aaKnown RBP18.1■□□□□ 0.49
COPS7A-211ENST00000540408 POLR3AO14802 1390 aaPredicted RBP18.1■□□□□ 0.49
COPS7A-211ENST00000540408 TRIM37O94972 964 aa18.1■□□□□ 0.49
COPS7A-211ENST00000540408 EZH2Q15910 746 aaKnown RBP18.1■□□□□ 0.49
COPS7A-211ENST00000540408 CRYBG1Q9Y4K1 1723 aa18.09■□□□□ 0.49
COPS7A-211ENST00000540408 APBA3O96018 575 aa18.09■□□□□ 0.49
COPS7A-211ENST00000540408 SRPK2P78362 688 aaKnown RBP18.09■□□□□ 0.49
COPS7A-211ENST00000540408 BARGINQ6ZT62 677 aa18.09■□□□□ 0.49
COPS7A-211ENST00000540408 NLRP13Q86W25 1043 aa18.09■□□□□ 0.49
COPS7A-211ENST00000540408 THSD7AQ9UPZ6 1657 aa18.09■□□□□ 0.49
COPS7A-211ENST00000540408 DISP2A7MBM2 1401 aa18.08■□□□□ 0.49
COPS7A-211ENST00000540408 TCP11L2Q8N4U5 519 aa18.06■□□□□ 0.48
COPS7A-211ENST00000540408 CAMKK2Q96RR4 588 aa18.06■□□□□ 0.48
COPS7A-211ENST00000540408 PARD3Q8TEW0 1356 aa18.05■□□□□ 0.48
COPS7A-211ENST00000540408 PHRF1Q9P1Y6 1649 aaKnown RBP18.05■□□□□ 0.48
COPS7A-211ENST00000540408 THRAP3Q9Y2W1 955 aaKnown RBP18.05■□□□□ 0.48
COPS7A-211ENST00000540408 SSH2Q76I76 1423 aa18.05■□□□□ 0.48
COPS7A-211ENST00000540408 C11orf95C9JLR9 678 aaPredicted RBP18.04■□□□□ 0.48
COPS7A-211ENST00000540408 GCP02774 474 aa18.04■□□□□ 0.48
COPS7A-211ENST00000540408 NBPF1Q3BBV0 1214 aa18.04■□□□□ 0.48
COPS7A-211ENST00000540408 NBPF14Q5TI25 921 aa18.04■□□□□ 0.48
COPS7A-211ENST00000540408 LARP1Q6PKG0 1096 aaKnown RBP18.04■□□□□ 0.48
COPS7A-211ENST00000540408 CPDO75976 1380 aa18.04■□□□□ 0.48
COPS7A-211ENST00000540408 CENPJQ9HC77 1338 aaPredicted RBP18.03■□□□□ 0.48
COPS7A-211ENST00000540408 BRD4O60885 1362 aaPredicted RBP18.03■□□□□ 0.48
COPS7A-211ENST00000540408 PPIP5K1Q6PFW1 1433 aa18.02■□□□□ 0.48
COPS7A-211ENST00000540408 CABP2Q9NPB3 220 aa18.02■□□□□ 0.48
COPS7A-211ENST00000540408 KIAA1210Q9ULL0 1709 aa18.02■□□□□ 0.48
COPS7A-211ENST00000540408 USP19O94966 1318 aa18.01■□□□□ 0.47
COPS7A-211ENST00000540408 TNS1Q9HBL0 1735 aaKnown RBP18.01■□□□□ 0.47
COPS7A-211ENST00000540408 TOPAZ1Q8N9V7 1692 aa18■□□□□ 0.47
COPS7A-211ENST00000540408 CAMTA1Q9Y6Y1 1673 aa18■□□□□ 0.47
COPS7A-211ENST00000540408 ZBTB7CA1YPR0 619 aa18■□□□□ 0.47
COPS7A-211ENST00000540408 NLRP6P59044 892 aa17.99■□□□□ 0.47
COPS7A-211ENST00000540408 NRKQ7Z2Y5 1582 aa17.99■□□□□ 0.47
COPS7A-211ENST00000540408 CABP1Q9NZU7 370 aa17.98■□□□□ 0.47
COPS7A-211ENST00000540408 TOM1L2Q6ZVM7 507 aa17.95■□□□□ 0.46
COPS7A-211ENST00000540408 CRB1P82279 1406 aa17.95■□□□□ 0.46
COPS7A-211ENST00000540408 EVC2Q86UK5 1308 aa17.95■□□□□ 0.46
COPS7A-211ENST00000540408 COL5A2P05997 1499 aaPredicted RBP17.95■□□□□ 0.46
COPS7A-211ENST00000540408 LMO7Q8WWI1 1683 aa17.94■□□□□ 0.46
COPS7A-211ENST00000540408 DDB1Q16531 1140 aa17.94■□□□□ 0.46
COPS7A-211ENST00000540408 AATKQ6ZMQ8 1374 aa17.93■□□□□ 0.46
COPS7A-211ENST00000540408 USP6P35125 1406 aa17.93■□□□□ 0.46
COPS7A-211ENST00000540408 ZNF692Q9BU19 519 aaPredicted RBP17.93■□□□□ 0.46
COPS7A-211ENST00000540408 DCAF8L1A6NGE4 600 aa17.92■□□□□ 0.46
COPS7A-211ENST00000540408 PPP1R1BQ9UD71 204 aaPredicted RBP17.92■□□□□ 0.46
COPS7A-211ENST00000540408 OVOS2A0A0G2JMS6 1433 aa17.91■□□□□ 0.46
COPS7A-211ENST00000540408 OVOS2A0A0J9YW53 1432 aa17.91■□□□□ 0.46
COPS7A-211ENST00000540408 OVOS2Q6IE36 1432 aa17.91■□□□□ 0.46
COPS7A-211ENST00000540408 KCNH5Q8NCM2 988 aa17.91■□□□□ 0.46
COPS7A-211ENST00000540408 CDCA7Q9BWT1 371 aaPredicted RBP17.91■□□□□ 0.46
COPS7A-211ENST00000540408 SPON1Q9HCB6 807 aa17.91■□□□□ 0.46
COPS7A-211ENST00000540408 PLSCR1O15162 318 aa17.9■□□□□ 0.46
COPS7A-211ENST00000540408 L3MBTL2Q969R5 705 aa17.9■□□□□ 0.46
COPS7A-211ENST00000540408 PARP4Q9UKK3 1724 aaKnown RBP17.89■□□□□ 0.46
COPS7A-211ENST00000540408 QRICH2Q9H0J4 1663 aa17.89■□□□□ 0.45
COPS7A-211ENST00000540408 RREB1Q92766 1687 aa17.88■□□□□ 0.45
COPS7A-211ENST00000540408 KCNQ2O43526 872 aa17.88■□□□□ 0.45
COPS7A-211ENST00000540408 CSB-PGBD3P0DP91 1061 aa17.88■□□□□ 0.45
COPS7A-211ENST00000540408 BCL11BQ9C0K0 894 aaPredicted RBP17.88■□□□□ 0.45
COPS7A-211ENST00000540408 WDR17Q8IZU2 1322 aa17.87■□□□□ 0.45
COPS7A-211ENST00000540408 TTC21BQ7Z4L5 1316 aa17.86■□□□□ 0.45
COPS7A-211ENST00000540408 SLIT3O75094 1523 aa17.86■□□□□ 0.45
COPS7A-211ENST00000540408 NUP188Q5SRE5 1749 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms