RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 PDZRN3Q9UPQ7 1066 aa7.04□□□□□ -1.28
C2CD3-214ENST00000540057 SLC27A5Q9Y2P5 690 aa7.04□□□□□ -1.28
C2CD3-214ENST00000540057 RIMS1Q86UR5 1692 aaKnown RBP7.03□□□□□ -1.28
C2CD3-214ENST00000540057 TULP1O00294 542 aaPredicted RBP7.03□□□□□ -1.28
C2CD3-214ENST00000540057 SPRYD7Q5W111 196 aa7.03□□□□□ -1.28
C2CD3-214ENST00000540057 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.03□□□□□ -1.28
C2CD3-214ENST00000540057 MINK1Q8N4C8 1332 aaPredicted RBP7.02□□□□□ -1.28
C2CD3-214ENST00000540057 KIF27Q86VH2 1401 aa7.02□□□□□ -1.29
C2CD3-214ENST00000540057 MDM2Q00987 491 aaPredicted RBP7.02□□□□□ -1.29
C2CD3-214ENST00000540057 FAM160A2Q8N612 972 aaPredicted RBP7.02□□□□□ -1.29
C2CD3-214ENST00000540057 CARMIL1Q5VZK9 1371 aa7.02□□□□□ -1.29
C2CD3-214ENST00000540057 ARID4BQ4LE39 1312 aaPredicted RBP7.01□□□□□ -1.29
C2CD3-214ENST00000540057 RAPGEF3O95398 923 aa7.01□□□□□ -1.29
C2CD3-214ENST00000540057 TRAF7Q6Q0C0 670 aa7.01□□□□□ -1.29
C2CD3-214ENST00000540057 PRDM9Q9NQV7 894 aa7.01□□□□□ -1.29
C2CD3-214ENST00000540057 KIAA0556O60303 1618 aa7.01□□□□□ -1.29
C2CD3-214ENST00000540057 UGGT2Q9NYU1 1516 aa7.01□□□□□ -1.29
C2CD3-214ENST00000540057 BRICD5Q6PL45 260 aa7□□□□□ -1.29
C2CD3-214ENST00000540057 RNF19BQ6ZMZ0 732 aa7□□□□□ -1.29
C2CD3-214ENST00000540057 ZNF598Q86UK7 904 aaKnown RBP7□□□□□ -1.29
C2CD3-214ENST00000540057 SALL2Q9Y467 1007 aaPredicted RBP7□□□□□ -1.29
C2CD3-214ENST00000540057 FMNL1O95466 1100 aaPredicted RBP6.99□□□□□ -1.29
C2CD3-214ENST00000540057 ZNF697Q5TEC3 545 aa6.99□□□□□ -1.29
C2CD3-214ENST00000540057 LMOD2Q6P5Q4 547 aa6.99□□□□□ -1.29
C2CD3-214ENST00000540057 FRMPD1Q5SYB0 1578 aa6.99□□□□□ -1.29
C2CD3-214ENST00000540057 PHLDB1Q86UU1 1377 aa6.98□□□□□ -1.29
C2CD3-214ENST00000540057 GDF9O60383 454 aa6.98□□□□□ -1.29
C2CD3-214ENST00000540057 PRR20EP86478 221 aa6.98□□□□□ -1.29
C2CD3-214ENST00000540057 PRR20CP86479 221 aa6.98□□□□□ -1.29
C2CD3-214ENST00000540057 PRR20DP86480 221 aa6.98□□□□□ -1.29
C2CD3-214ENST00000540057 PRR20BP86481 221 aa6.98□□□□□ -1.29
C2CD3-214ENST00000540057 PRR20AP86496 221 aa6.98□□□□□ -1.29
C2CD3-214ENST00000540057 MSS51Q4VC12 460 aa6.98□□□□□ -1.29
C2CD3-214ENST00000540057 FCF1Q9Y324 198 aaKnown RBP6.98□□□□□ -1.29
C2CD3-214ENST00000540057 ABCA8O94911 1581 aa6.97□□□□□ -1.29
C2CD3-214ENST00000540057 HLA-CQ95604 372 aa6.97□□□□□ -1.29
C2CD3-214ENST00000540057 FAM217BQ9NTX9 383 aaPredicted RBP6.97□□□□□ -1.29
C2CD3-214ENST00000540057 STRCQ7RTU9 1775 aa6.97□□□□□ -1.29
C2CD3-214ENST00000540057 KDM4AO75164 1064 aa6.96□□□□□ -1.3
C2CD3-214ENST00000540057 REPIN1Q9BWE0 567 aaKnown RBP6.96□□□□□ -1.3
C2CD3-214ENST00000540057 GPCPD1Q9NPB8 672 aa6.96□□□□□ -1.3
C2CD3-214ENST00000540057 YEATS2Q9ULM3 1422 aa6.95□□□□□ -1.3
C2CD3-214ENST00000540057 ABCA9Q8IUA7 1624 aa6.95□□□□□ -1.3
C2CD3-214ENST00000540057 TNFRSF10AO00220 468 aa6.95□□□□□ -1.3
C2CD3-214ENST00000540057 HOXA2O43364 376 aa6.95□□□□□ -1.3
C2CD3-214ENST00000540057 PKD2L1Q9P0L9 805 aa6.95□□□□□ -1.3
C2CD3-214ENST00000540057 NEO1Q92859 1461 aa6.95□□□□□ -1.3
C2CD3-214ENST00000540057 SIGLEC1Q9BZZ2 1709 aa6.95□□□□□ -1.3
C2CD3-214ENST00000540057 ARHGEF40Q8TER5 1519 aa6.95□□□□□ -1.3
C2CD3-214ENST00000540057 SUPT5HO00267 1087 aaKnown RBP6.94□□□□□ -1.3
C2CD3-214ENST00000540057 ZMYND10O75800 440 aa6.94□□□□□ -1.3
C2CD3-214ENST00000540057 CLCN1P35523 988 aa6.94□□□□□ -1.3
C2CD3-214ENST00000540057 RPIAP49247 311 aa6.94□□□□□ -1.3
C2CD3-214ENST00000540057 USP46P62068 366 aa6.94□□□□□ -1.3
C2CD3-214ENST00000540057 GRIPAP1Q4V328 841 aa6.94□□□□□ -1.3
C2CD3-214ENST00000540057 BARGINQ6ZT62 677 aa6.94□□□□□ -1.3
C2CD3-214ENST00000540057 PREX1Q8TCU6 1659 aa6.93□□□□□ -1.3
C2CD3-214ENST00000540057 FER1L4A9Z1Z3 1794 aa6.93□□□□□ -1.3
C2CD3-214ENST00000540057 MMP16P51512 607 aa6.93□□□□□ -1.3
C2CD3-214ENST00000540057 GUCA2AQ02747 115 aa6.93□□□□□ -1.3
C2CD3-214ENST00000540057 Q3C1V9 767 aa6.93□□□□□ -1.3
C2CD3-214ENST00000540057 ZC3H15Q8WU90 426 aaKnown RBP6.93□□□□□ -1.3
C2CD3-214ENST00000540057 TTC37Q6PGP7 1564 aa6.93□□□□□ -1.3
C2CD3-214ENST00000540057 LTBP4Q8N2S1 1624 aa6.93□□□□□ -1.3
C2CD3-214ENST00000540057 RICTORQ6R327 1708 aa6.93□□□□□ -1.3
C2CD3-214ENST00000540057 POGZQ7Z3K3 1410 aa6.93□□□□□ -1.3
C2CD3-214ENST00000540057 ARID3CA6NKF2 412 aa6.92□□□□□ -1.3
C2CD3-214ENST00000540057 DXOO77932 396 aaKnown RBP6.92□□□□□ -1.3
C2CD3-214ENST00000540057 FANCAO15360 1455 aa6.92□□□□□ -1.3
C2CD3-214ENST00000540057 ATP10BO94823 1461 aa6.92□□□□□ -1.3
C2CD3-214ENST00000540057 IQSEC2Q5JU85 1478 aa6.92□□□□□ -1.3
C2CD3-214ENST00000540057 RAPGEF2Q9Y4G8 1499 aa6.92□□□□□ -1.3
C2CD3-214ENST00000540057 DGAT1O75907 488 aa6.91□□□□□ -1.3
C2CD3-214ENST00000540057 MYT1Q01538 1121 aa6.91□□□□□ -1.3
C2CD3-214ENST00000540057 MLECQ14165 292 aa6.91□□□□□ -1.3
C2CD3-214ENST00000540057 AMHR2Q16671 573 aa6.91□□□□□ -1.3
C2CD3-214ENST00000540057 USB1Q9BQ65 265 aaKnown RBP6.91□□□□□ -1.3
C2CD3-214ENST00000540057 PTPRTO14522 1441 aa6.91□□□□□ -1.3
C2CD3-214ENST00000540057 DENND4BO75064 1496 aaPredicted RBP6.91□□□□□ -1.3
C2CD3-214ENST00000540057 CEBPAP49715 358 aaPredicted RBP6.9□□□□□ -1.3
C2CD3-214ENST00000540057 FHOD3Q2V2M9 1422 aa6.9□□□□□ -1.31
C2CD3-214ENST00000540057 AKNAQ7Z591 1439 aa6.9□□□□□ -1.31
C2CD3-214ENST00000540057 FAM187AA6NFU0 413 aa6.89□□□□□ -1.31
C2CD3-214ENST00000540057 FOXC1Q12948 553 aa6.89□□□□□ -1.31
C2CD3-214ENST00000540057 PKDCCQ504Y2 493 aa6.89□□□□□ -1.31
C2CD3-214ENST00000540057 GOLGA3Q08378 1498 aa6.89□□□□□ -1.31
C2CD3-214ENST00000540057 ARHGEF12Q9NZN5 1544 aa6.89□□□□□ -1.31
C2CD3-214ENST00000540057 SETD1BQ9UPS6 1966 aaKnown RBP6.88□□□□□ -1.31
C2CD3-214ENST00000540057 CTTNBP2Q8WZ74 1663 aa6.88□□□□□ -1.31
C2CD3-214ENST00000540057 ZMYM4Q5VZL5 1548 aa6.88□□□□□ -1.31
C2CD3-214ENST00000540057 ZFYVE16Q7Z3T8 1539 aa6.88□□□□□ -1.31
C2CD3-214ENST00000540057 SYMPKQ92797 1274 aaKnown RBP6.88□□□□□ -1.31
C2CD3-214ENST00000540057 TOR4AQ9NXH8 423 aa6.88□□□□□ -1.31
C2CD3-214ENST00000540057 PCDHGC3Q9UN70 934 aa6.88□□□□□ -1.31
C2CD3-214ENST00000540057 MED1Q15648 1581 aaPredicted RBP6.87□□□□□ -1.31
C2CD3-214ENST00000540057 EFCAB5A4FU69 1503 aa6.87□□□□□ -1.31
C2CD3-214ENST00000540057 UHRF1BP1Q6BDS2 1440 aa6.87□□□□□ -1.31
C2CD3-214ENST00000540057 SSTR3P32745 418 aaPredicted RBP6.87□□□□□ -1.31
C2CD3-214ENST00000540057 KRI1Q8N9T8 703 aaKnown RBP6.87□□□□□ -1.31
C2CD3-214ENST00000540057 CD2BP2O95400 341 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms