RNA–Protein interactions for RNA: ENST00000539935.6

CACNB4-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene CACNB4, Length 8,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-210ENST00000539935 TSPYL4Q9UJ04 414 aa15.28■□□□□ 0.04
CACNB4-210ENST00000539935 CENPHQ9H3R5 247 aa15.27■□□□□ 0.04
CACNB4-210ENST00000539935 PIP4K2AP48426 406 aaPredicted RBP15.27■□□□□ 0.04
CACNB4-210ENST00000539935 PPM1FP49593 454 aaPredicted RBP15.27■□□□□ 0.04
CACNB4-210ENST00000539935 CDC45O75419 566 aa15.27■□□□□ 0.03
CACNB4-210ENST00000539935 LUC7LQ9NQ29 371 aaKnown RBP15.27■□□□□ 0.03
CACNB4-210ENST00000539935 MINK1Q8N4C8 1332 aaPredicted RBP15.27■□□□□ 0.03
CACNB4-210ENST00000539935 USP8P40818 1118 aa15.27■□□□□ 0.03
CACNB4-210ENST00000539935 CEP63Q96MT8 703 aa15.27■□□□□ 0.03
CACNB4-210ENST00000539935 DHX8Q14562 1220 aaKnown RBP15.27■□□□□ 0.03
CACNB4-210ENST00000539935 DEF6Q9H4E7 631 aa15.26■□□□□ 0.03
CACNB4-210ENST00000539935 GOLGA6L10A0A0M3HER8 536 aa15.26■□□□□ 0.03
CACNB4-210ENST00000539935 ZNHIT6Q9NWK9 470 aaKnown RBP15.26■□□□□ 0.03
CACNB4-210ENST00000539935 UBTFL1P0CB47 393 aaPredicted RBP15.25■□□□□ 0.03
CACNB4-210ENST00000539935 SLC3A2P08195 630 aaKnown RBP15.25■□□□□ 0.03
CACNB4-210ENST00000539935 MCM2P49736 904 aa15.25■□□□□ 0.03
CACNB4-210ENST00000539935 RNF214Q8ND24 703 aa15.25■□□□□ 0.03
CACNB4-210ENST00000539935 TBC1D2BQ9UPU7 963 aa15.25■□□□□ 0.03
CACNB4-210ENST00000539935 HIP1O00291 1037 aa15.24■□□□□ 0.03
CACNB4-210ENST00000539935 TXLNBQ8N3L3 684 aa15.24■□□□□ 0.03
CACNB4-210ENST00000539935 NFKBIBQ15653 356 aa15.23■□□□□ 0.03
CACNB4-210ENST00000539935 CAVIN1Q6NZI2 390 aaKnown RBP15.23■□□□□ 0.03
CACNB4-210ENST00000539935 ZNF396Q96N95 335 aaPredicted RBP15.23■□□□□ 0.03
CACNB4-210ENST00000539935 TSPY26PQ9H489 355 aa15.23■□□□□ 0.03
CACNB4-210ENST00000539935 PKNOX2Q96KN3 472 aa15.23■□□□□ 0.03
CACNB4-210ENST00000539935 WASHC2AQ641Q2 1341 aa15.23■□□□□ 0.03
CACNB4-210ENST00000539935 BRPF1P55201 1214 aaPredicted RBP15.23■□□□□ 0.03
CACNB4-210ENST00000539935 PPM1EQ8WY54 764 aa15.23■□□□□ 0.03
CACNB4-210ENST00000539935 DDX23Q9BUQ8 820 aaKnown RBP15.23■□□□□ 0.03
CACNB4-210ENST00000539935 RAPGEF4Q8WZA2 1011 aa15.22■□□□□ 0.03
CACNB4-210ENST00000539935 JMYQ8N9B5 988 aa15.22■□□□□ 0.03
CACNB4-210ENST00000539935 FSD1Q9BTV5 496 aa15.22■□□□□ 0.03
CACNB4-210ENST00000539935 MIA2Q96PC5 1412 aa15.22■□□□□ 0.03
CACNB4-210ENST00000539935 CCDC112Q8NEF3 446 aa15.21■□□□□ 0.03
CACNB4-210ENST00000539935 FMNL2Q96PY5 1086 aa15.21■□□□□ 0.03
CACNB4-210ENST00000539935 PRDM2Q13029 1718 aa15.21■□□□□ 0.03
CACNB4-210ENST00000539935 KRT18P05783 430 aaKnown RBP15.21■□□□□ 0.03
CACNB4-210ENST00000539935 TRAK2O60296 914 aa15.21■□□□□ 0.03
CACNB4-210ENST00000539935 SPATA24Q86W54 205 aa15.21■□□□□ 0.03
CACNB4-210ENST00000539935 MTMR7Q9Y216 660 aa15.21■□□□□ 0.03
CACNB4-210ENST00000539935 RABEP1Q15276 862 aa15.21■□□□□ 0.03
CACNB4-210ENST00000539935 STIM1Q13586 685 aa15.21■□□□□ 0.02
CACNB4-210ENST00000539935 AIMP1Q12904 312 aaKnown RBP15.21■□□□□ 0.02
CACNB4-210ENST00000539935 STAMBPO95630 424 aa15.2■□□□□ 0.02
CACNB4-210ENST00000539935 FHOD3Q2V2M9 1422 aa15.2■□□□□ 0.02
CACNB4-210ENST00000539935 MAPK8IP2Q13387 824 aaPredicted RBP15.2■□□□□ 0.02
CACNB4-210ENST00000539935 NEBLO76041 1014 aa15.19■□□□□ 0.02
CACNB4-210ENST00000539935 GRIPAP1Q4V328 841 aa15.19■□□□□ 0.02
CACNB4-210ENST00000539935 CCDC181Q5TID7 509 aa15.19■□□□□ 0.02
CACNB4-210ENST00000539935 CFAP57Q96MR6 1250 aa15.18■□□□□ 0.02
CACNB4-210ENST00000539935 EIF3JO75822 258 aaKnown RBP15.18■□□□□ 0.02
CACNB4-210ENST00000539935 SERPINC1P01008 464 aa15.18■□□□□ 0.02
CACNB4-210ENST00000539935 CCDC91Q7Z6B0 441 aa15.18■□□□□ 0.02
CACNB4-210ENST00000539935 PPFIBP1Q86W92 1011 aa15.18■□□□□ 0.02
CACNB4-210ENST00000539935 DACH1Q9UI36 760 aa15.18■□□□□ 0.02
CACNB4-210ENST00000539935 ATP2B1P20020 1258 aa15.18■□□□□ 0.02
CACNB4-210ENST00000539935 STK38Q15208 465 aa15.17■□□□□ 0.02
CACNB4-210ENST00000539935 PDCL3Q9H2J4 239 aa15.17■□□□□ 0.02
CACNB4-210ENST00000539935 CCDC192P0DO97 292 aa15.17■□□□□ 0.02
CACNB4-210ENST00000539935 IQCEQ6IPM2 695 aa15.17■□□□□ 0.02
CACNB4-210ENST00000539935 TICAM2Q86XR7 235 aa15.17■□□□□ 0.02
CACNB4-210ENST00000539935 NEK4P51957 841 aa15.17■□□□□ 0.02
CACNB4-210ENST00000539935 GNAI3P08754 354 aa15.17■□□□□ 0.02
CACNB4-210ENST00000539935 HMOX1P09601 288 aa15.17■□□□□ 0.02
CACNB4-210ENST00000539935 SLC26A8Q96RN1 970 aa15.16■□□□□ 0.02
CACNB4-210ENST00000539935 ERLIN1O75477 346 aa15.16■□□□□ 0.02
CACNB4-210ENST00000539935 GAPVD1Q14C86 1478 aa15.16■□□□□ 0.02
CACNB4-210ENST00000539935 CCDC175P0C221 793 aa15.16■□□□□ 0.02
CACNB4-210ENST00000539935 SPC24Q8NBT2 197 aa15.16■□□□□ 0.02
CACNB4-210ENST00000539935 FGD5Q6ZNL6 1462 aa15.16■□□□□ 0.02
CACNB4-210ENST00000539935 PANK1Q8TE04 598 aa15.16■□□□□ 0.02
CACNB4-210ENST00000539935 ERC1Q8IUD2 1116 aa15.15■□□□□ 0.02
CACNB4-210ENST00000539935 KDM4AO75164 1064 aa15.15■□□□□ 0.02
CACNB4-210ENST00000539935 PRPF40AO75400 957 aaKnown RBP15.15■□□□□ 0.02
CACNB4-210ENST00000539935 KLHL34Q8N239 644 aa15.15■□□□□ 0.02
CACNB4-210ENST00000539935 JPH4Q96JJ6 628 aa15.15■□□□□ 0.02
CACNB4-210ENST00000539935 FIBPO43427 364 aa15.15■□□□□ 0.02
CACNB4-210ENST00000539935 CCDC30Q5VVM6 783 aa15.15■□□□□ 0.02
CACNB4-210ENST00000539935 ANKRD1Q15327 319 aa15.15■□□□□ 0.02
CACNB4-210ENST00000539935 KIF6Q6ZMV9 814 aa15.14■□□□□ 0.01
CACNB4-210ENST00000539935 NCAPD3P42695 1498 aa15.14■□□□□ 0.01
CACNB4-210ENST00000539935 FAM193AP78312 1265 aa15.14■□□□□ 0.01
CACNB4-210ENST00000539935 TRIM22Q8IYM9 498 aa15.14■□□□□ 0.01
CACNB4-210ENST00000539935 SURF6O75683 361 aaKnown RBP15.14■□□□□ 0.01
CACNB4-210ENST00000539935 CEBPZQ03701 1054 aaKnown RBP15.13■□□□□ 0.01
CACNB4-210ENST00000539935 DNAJC2Q99543 621 aaKnown RBP15.13■□□□□ 0.01
CACNB4-210ENST00000539935 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.13■□□□□ 0.01
CACNB4-210ENST00000539935 MAP2K1Q02750 393 aaPredicted RBP15.13■□□□□ 0.01
CACNB4-210ENST00000539935 PUS7Q96PZ0 661 aaKnown RBP15.13■□□□□ 0.01
CACNB4-210ENST00000539935 GNL3LQ9NVN8 582 aaKnown RBP15.13■□□□□ 0.01
CACNB4-210ENST00000539935 TNMDQ9H2S6 317 aa15.12■□□□□ 0.01
CACNB4-210ENST00000539935 DESP17661 470 aa15.12■□□□□ 0.01
CACNB4-210ENST00000539935 CFAP45Q9UL16 551 aa15.12■□□□□ 0.01
CACNB4-210ENST00000539935 ATF3P18847 181 aa15.12■□□□□ 0.01
CACNB4-210ENST00000539935 AEBP1Q8IUX7 1158 aa15.12■□□□□ 0.01
CACNB4-210ENST00000539935 RBM25P49756 843 aaKnown RBP15.12■□□□□ 0.01
CACNB4-210ENST00000539935 CBFA2T2O43439 604 aa15.12■□□□□ 0.01
CACNB4-210ENST00000539935 ME1P48163 572 aa15.11■□□□□ 0.01
CACNB4-210ENST00000539935 FEZ1Q99689 392 aa15.11■□□□□ 0.01
CACNB4-210ENST00000539935 LRRCC1Q9C099 1032 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms