RNA–Protein interactions for RNA: ENST00000539784.1

TSPAN9-IT1-201, TSPAN9 intronic transcript 1, humanhuman

TSL 4 BASIC

Gene TSPAN9-IT1, Length 562 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-IT1-201ENST00000539784 TOPAZ1Q8N9V7 1692 aa18.28■□□□□ 0.52
TSPAN9-IT1-201ENST00000539784 ACEP12821 1306 aa18.28■□□□□ 0.52
TSPAN9-IT1-201ENST00000539784 FAM83GA6ND36 823 aa18.28■□□□□ 0.52
TSPAN9-IT1-201ENST00000539784 CABP2Q9NPB3 220 aa18.28■□□□□ 0.52
TSPAN9-IT1-201ENST00000539784 ROCK2O75116 1388 aaKnown RBP18.28■□□□□ 0.52
TSPAN9-IT1-201ENST00000539784 GLI3P10071 1580 aa18.27■□□□□ 0.52
TSPAN9-IT1-201ENST00000539784 NUTM2GQ5VZR2 741 aa18.27■□□□□ 0.52
TSPAN9-IT1-201ENST00000539784 PPIP5K1Q6PFW1 1433 aa18.25■□□□□ 0.51
TSPAN9-IT1-201ENST00000539784 TRIM26Q12899 539 aaPredicted RBP18.25■□□□□ 0.51
TSPAN9-IT1-201ENST00000539784 VPS72Q15906 364 aa18.25■□□□□ 0.51
TSPAN9-IT1-201ENST00000539784 NBPF8Q3BBV2 869 aa18.25■□□□□ 0.51
TSPAN9-IT1-201ENST00000539784 NWD2Q9ULI1 1742 aa18.25■□□□□ 0.51
TSPAN9-IT1-201ENST00000539784 POLR3AO14802 1390 aaPredicted RBP18.25■□□□□ 0.51
TSPAN9-IT1-201ENST00000539784 PLEKHG3A1L390 1219 aa18.24■□□□□ 0.51
TSPAN9-IT1-201ENST00000539784 BTG4Q9NY30 223 aa18.24■□□□□ 0.51
TSPAN9-IT1-201ENST00000539784 CRYBG1Q9Y4K1 1723 aa18.23■□□□□ 0.51
TSPAN9-IT1-201ENST00000539784 PRDM11Q9NQV5 511 aa18.23■□□□□ 0.51
TSPAN9-IT1-201ENST00000539784 COL14A1Q05707 1796 aaKnown RBP18.22■□□□□ 0.51
TSPAN9-IT1-201ENST00000539784 A0A0G2JS52 829 aa18.22■□□□□ 0.51
TSPAN9-IT1-201ENST00000539784 MYT1Q01538 1121 aa18.22■□□□□ 0.51
TSPAN9-IT1-201ENST00000539784 TONSLQ96HA7 1378 aa18.21■□□□□ 0.51
TSPAN9-IT1-201ENST00000539784 ABTB2Q8N961 1025 aa18.21■□□□□ 0.51
TSPAN9-IT1-201ENST00000539784 EVC2Q86UK5 1308 aa18.21■□□□□ 0.51
TSPAN9-IT1-201ENST00000539784 NRAPQ86VF7 1730 aa18.2■□□□□ 0.5
TSPAN9-IT1-201ENST00000539784 PHRF1Q9P1Y6 1649 aaKnown RBP18.2■□□□□ 0.5
TSPAN9-IT1-201ENST00000539784 ZC3H6P61129 1189 aaKnown RBP18.2■□□□□ 0.5
TSPAN9-IT1-201ENST00000539784 CHRNA2Q15822 529 aa18.2■□□□□ 0.5
TSPAN9-IT1-201ENST00000539784 SEPT12Q8IYM1 358 aa18.2■□□□□ 0.5
TSPAN9-IT1-201ENST00000539784 CABP1Q9NZU7 370 aa18.2■□□□□ 0.5
TSPAN9-IT1-201ENST00000539784 KIAA0232Q92628 1395 aa18.19■□□□□ 0.5
TSPAN9-IT1-201ENST00000539784 BRWD3Q6RI45 1802 aa18.17■□□□□ 0.5
TSPAN9-IT1-201ENST00000539784 FAM98CQ17RN3 349 aaKnown RBP18.17■□□□□ 0.5
TSPAN9-IT1-201ENST00000539784 CARD11Q9BXL7 1154 aa18.16■□□□□ 0.5
TSPAN9-IT1-201ENST00000539784 STRN4Q9NRL3 753 aa18.16■□□□□ 0.5
TSPAN9-IT1-201ENST00000539784 NRKQ7Z2Y5 1582 aa18.14■□□□□ 0.49
TSPAN9-IT1-201ENST00000539784 NLRP13Q86W25 1043 aa18.14■□□□□ 0.49
TSPAN9-IT1-201ENST00000539784 USP6P35125 1406 aa18.14■□□□□ 0.49
TSPAN9-IT1-201ENST00000539784 ZBTB7CA1YPR0 619 aa18.13■□□□□ 0.49
TSPAN9-IT1-201ENST00000539784 KRT27Q7Z3Y8 459 aa18.13■□□□□ 0.49
TSPAN9-IT1-201ENST00000539784 ONECUT3O60422 494 aaPredicted RBP18.12■□□□□ 0.49
TSPAN9-IT1-201ENST00000539784 USP19O94966 1318 aa18.12■□□□□ 0.49
TSPAN9-IT1-201ENST00000539784 SPATA31A5Q5VU36 1347 aa18.12■□□□□ 0.49
TSPAN9-IT1-201ENST00000539784 SPATA31A7Q8IWB4 1347 aa18.12■□□□□ 0.49
TSPAN9-IT1-201ENST00000539784 NLRP6P59044 892 aa18.11■□□□□ 0.49
TSPAN9-IT1-201ENST00000539784 BRD4O60885 1362 aaPredicted RBP18.1■□□□□ 0.49
TSPAN9-IT1-201ENST00000539784 GCP02774 474 aa18.1■□□□□ 0.49
TSPAN9-IT1-201ENST00000539784 EVA1CP58658 441 aa18.1■□□□□ 0.49
TSPAN9-IT1-201ENST00000539784 CCDC125Q86Z20 511 aa18.1■□□□□ 0.49
TSPAN9-IT1-201ENST00000539784 USP35Q9P2H5 1018 aa18.1■□□□□ 0.49
TSPAN9-IT1-201ENST00000539784 BLMP54132 1417 aaPredicted RBP18.09■□□□□ 0.49
TSPAN9-IT1-201ENST00000539784 SPATA31A1Q5TZJ5 1347 aa18.08■□□□□ 0.49
TSPAN9-IT1-201ENST00000539784 SF3B2Q13435 895 aaKnown RBP18.08■□□□□ 0.48
TSPAN9-IT1-201ENST00000539784 CPDO75976 1380 aa18.07■□□□□ 0.48
TSPAN9-IT1-201ENST00000539784 EP400Q96L91 3159 aa18.07■□□□□ 0.48
TSPAN9-IT1-201ENST00000539784 FAM182BQ5T319 152 aa18.07■□□□□ 0.48
TSPAN9-IT1-201ENST00000539784 SSH2Q76I76 1423 aa18.06■□□□□ 0.48
TSPAN9-IT1-201ENST00000539784 PIK3C2AO00443 1686 aa18.06■□□□□ 0.48
TSPAN9-IT1-201ENST00000539784 CAMTA1Q9Y6Y1 1673 aa18.06■□□□□ 0.48
TSPAN9-IT1-201ENST00000539784 SBNO2Q9Y2G9 1366 aa18.05■□□□□ 0.48
TSPAN9-IT1-201ENST00000539784 TTC21BQ7Z4L5 1316 aa18.05■□□□□ 0.48
TSPAN9-IT1-201ENST00000539784 AKAP12Q02952 1782 aa18.05■□□□□ 0.48
TSPAN9-IT1-201ENST00000539784 SOX12O15370 315 aa18.05■□□□□ 0.48
TSPAN9-IT1-201ENST00000539784 LARP1Q6PKG0 1096 aaKnown RBP18.05■□□□□ 0.48
TSPAN9-IT1-201ENST00000539784 DEFB132Q7Z7B7 95 aa18.05■□□□□ 0.48
TSPAN9-IT1-201ENST00000539784 ZNF692Q9BU19 519 aaPredicted RBP18.05■□□□□ 0.48
TSPAN9-IT1-201ENST00000539784 LMO7Q8WWI1 1683 aa18.05■□□□□ 0.48
TSPAN9-IT1-201ENST00000539784 THSD7AQ9UPZ6 1657 aa18.05■□□□□ 0.48
TSPAN9-IT1-201ENST00000539784 KTN1Q86UP2 1357 aaKnown RBP18.04■□□□□ 0.48
TSPAN9-IT1-201ENST00000539784 TMC1Q8TDI8 760 aa18.04■□□□□ 0.48
TSPAN9-IT1-201ENST00000539784 SLIT3O75094 1523 aa18.03■□□□□ 0.48
TSPAN9-IT1-201ENST00000539784 CPSF1Q10570 1443 aaKnown RBP18.02■□□□□ 0.48
TSPAN9-IT1-201ENST00000539784 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.02■□□□□ 0.48
TSPAN9-IT1-201ENST00000539784 ZRANB1Q9UGI0 708 aa18.02■□□□□ 0.48
TSPAN9-IT1-201ENST00000539784 TTC21AQ8NDW8 1320 aa18.01■□□□□ 0.47
TSPAN9-IT1-201ENST00000539784 PCGF6Q9BYE7 350 aa18.01■□□□□ 0.47
TSPAN9-IT1-201ENST00000539784 COL5A2P05997 1499 aaPredicted RBP18.01■□□□□ 0.47
TSPAN9-IT1-201ENST00000539784 ST20-MTHFSA0A0A6YYL1 179 aa17.99■□□□□ 0.47
TSPAN9-IT1-201ENST00000539784 TCP11L2Q8N4U5 519 aa17.99■□□□□ 0.47
TSPAN9-IT1-201ENST00000539784 SLC12A5Q9H2X9 1139 aa17.99■□□□□ 0.47
TSPAN9-IT1-201ENST00000539784 MON2Q7Z3U7 1717 aa17.98■□□□□ 0.47
TSPAN9-IT1-201ENST00000539784 BARGINQ6ZT62 677 aa17.98■□□□□ 0.47
TSPAN9-IT1-201ENST00000539784 HDGFL2Q7Z4V5 671 aaPredicted RBP17.98■□□□□ 0.47
TSPAN9-IT1-201ENST00000539784 AATKQ6ZMQ8 1374 aa17.98■□□□□ 0.47
TSPAN9-IT1-201ENST00000539784 CD163L1Q9NR16 1453 aa17.97■□□□□ 0.47
TSPAN9-IT1-201ENST00000539784 BAG6P46379 1132 aa17.97■□□□□ 0.47
TSPAN9-IT1-201ENST00000539784 PDE3BQ13370 1112 aa17.97■□□□□ 0.47
TSPAN9-IT1-201ENST00000539784 KCNH5Q8NCM2 988 aa17.97■□□□□ 0.47
TSPAN9-IT1-201ENST00000539784 CRB1P82279 1406 aa17.97■□□□□ 0.47
TSPAN9-IT1-201ENST00000539784 TOM1L2Q6ZVM7 507 aa17.96■□□□□ 0.47
TSPAN9-IT1-201ENST00000539784 NME9Q86XW9 330 aa17.96■□□□□ 0.47
TSPAN9-IT1-201ENST00000539784 ARHGEF25Q86VW2 580 aa17.95■□□□□ 0.46
TSPAN9-IT1-201ENST00000539784 TESK2Q96S53 571 aa17.95■□□□□ 0.46
TSPAN9-IT1-201ENST00000539784 TERF2IPQ9NYB0 399 aa17.95■□□□□ 0.46
TSPAN9-IT1-201ENST00000539784 AXIN2Q9Y2T1 843 aa17.95■□□□□ 0.46
TSPAN9-IT1-201ENST00000539784 RGPD1P0DJD0 1748 aa17.95■□□□□ 0.46
TSPAN9-IT1-201ENST00000539784 COL18A1P39060 1754 aa17.94■□□□□ 0.46
TSPAN9-IT1-201ENST00000539784 A0A1W2PP64 1363 aa17.94■□□□□ 0.46
TSPAN9-IT1-201ENST00000539784 FAM196AQ6ZSG2 479 aa17.94■□□□□ 0.46
TSPAN9-IT1-201ENST00000539784 THRAP3Q9Y2W1 955 aaKnown RBP17.94■□□□□ 0.46
TSPAN9-IT1-201ENST00000539784 TRIM37O94972 964 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms