RNA–Protein interactions for RNA: ENST00000539782.1

LDHB-208, Transcript of lactate dehydrogenase B, humanhuman

TSL 3

Gene LDHB, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-208ENST00000539782 NRAPQ86VF7 1730 aa10.55□□□□□ -0.72
LDHB-208ENST00000539782 TRPM3Q9HCF6 1732 aaPredicted RBP10.55□□□□□ -0.72
LDHB-208ENST00000539782 LRP5O75197 1615 aa10.55□□□□□ -0.72
LDHB-208ENST00000539782 RAB3GAP2Q9H2M9 1393 aa10.54□□□□□ -0.72
LDHB-208ENST00000539782 WASLO00401 505 aaPredicted RBP10.54□□□□□ -0.72
LDHB-208ENST00000539782 RGPD1P0DJD0 1748 aa10.53□□□□□ -0.72
LDHB-208ENST00000539782 DCAF11Q8TEB1 546 aa10.53□□□□□ -0.72
LDHB-208ENST00000539782 ALS2Q96Q42 1657 aa10.53□□□□□ -0.72
LDHB-208ENST00000539782 PRR36Q9H6K5 1346 aa10.53□□□□□ -0.72
LDHB-208ENST00000539782 EN1Q05925 392 aaPredicted RBP10.52□□□□□ -0.73
LDHB-208ENST00000539782 SPATA31A5Q5VU36 1347 aa10.52□□□□□ -0.73
LDHB-208ENST00000539782 SPATA31A7Q8IWB4 1347 aa10.52□□□□□ -0.73
LDHB-208ENST00000539782 ITSN1Q15811 1721 aa10.51□□□□□ -0.73
LDHB-208ENST00000539782 HRCP23327 699 aa10.51□□□□□ -0.73
LDHB-208ENST00000539782 FAM182BQ5T319 152 aa10.51□□□□□ -0.73
LDHB-208ENST00000539782 STAC3Q96MF2 364 aa10.51□□□□□ -0.73
LDHB-208ENST00000539782 STRN4Q9NRL3 753 aa10.51□□□□□ -0.73
LDHB-208ENST00000539782 ATP7BP35670 1465 aa10.5□□□□□ -0.73
LDHB-208ENST00000539782 KIAA0232Q92628 1395 aa10.5□□□□□ -0.73
LDHB-208ENST00000539782 R3HDM1Q15032 1099 aaKnown RBP10.49□□□□□ -0.73
LDHB-208ENST00000539782 CHRNA2Q15822 529 aa10.49□□□□□ -0.73
LDHB-208ENST00000539782 NUDT16Q96DE0 195 aaKnown RBP10.49□□□□□ -0.73
LDHB-208ENST00000539782 THSD7AQ9UPZ6 1657 aa10.49□□□□□ -0.73
LDHB-208ENST00000539782 CRYBG1Q9Y4K1 1723 aa10.48□□□□□ -0.73
LDHB-208ENST00000539782 EVA1CP58658 441 aa10.48□□□□□ -0.73
LDHB-208ENST00000539782 ZC3H6P61129 1189 aaKnown RBP10.48□□□□□ -0.73
LDHB-208ENST00000539782 NUTM2GQ5VZR2 741 aa10.48□□□□□ -0.73
LDHB-208ENST00000539782 FAM196AQ6ZSG2 479 aa10.48□□□□□ -0.73
LDHB-208ENST00000539782 USP35Q9P2H5 1018 aa10.48□□□□□ -0.73
LDHB-208ENST00000539782 SPATA31A1Q5TZJ5 1347 aa10.48□□□□□ -0.73
LDHB-208ENST00000539782 PHRF1Q9P1Y6 1649 aaKnown RBP10.47□□□□□ -0.73
LDHB-208ENST00000539782 ARHGEF28Q8N1W1 1705 aaKnown RBP10.47□□□□□ -0.73
LDHB-208ENST00000539782 PDE3BQ13370 1112 aa10.47□□□□□ -0.73
LDHB-208ENST00000539782 EZH2Q15910 746 aaKnown RBP10.47□□□□□ -0.73
LDHB-208ENST00000539782 DISP2A7MBM2 1401 aa10.47□□□□□ -0.73
LDHB-208ENST00000539782 TNS1Q9HBL0 1735 aaKnown RBP10.47□□□□□ -0.73
LDHB-208ENST00000539782 TRIM37O94972 964 aa10.46□□□□□ -0.73
LDHB-208ENST00000539782 APBA3O96018 575 aa10.46□□□□□ -0.73
LDHB-208ENST00000539782 CDK19Q9BWU1 502 aa10.46□□□□□ -0.73
LDHB-208ENST00000539782 PARD3Q8TEW0 1356 aa10.46□□□□□ -0.74
LDHB-208ENST00000539782 SSH2Q76I76 1423 aa10.45□□□□□ -0.74
LDHB-208ENST00000539782 ACEP12821 1306 aa10.45□□□□□ -0.74
LDHB-208ENST00000539782 ABTB2Q8N961 1025 aa10.45□□□□□ -0.74
LDHB-208ENST00000539782 ZBTB7CA1YPR0 619 aa10.44□□□□□ -0.74
LDHB-208ENST00000539782 NBPF8Q3BBV2 869 aa10.44□□□□□ -0.74
LDHB-208ENST00000539782 NBPF14Q5TI25 921 aa10.44□□□□□ -0.74
LDHB-208ENST00000539782 CCDC61Q9Y6R9 512 aa10.44□□□□□ -0.74
LDHB-208ENST00000539782 TOPAZ1Q8N9V7 1692 aa10.44□□□□□ -0.74
LDHB-208ENST00000539782 NRKQ7Z2Y5 1582 aa10.43□□□□□ -0.74
LDHB-208ENST00000539782 POLR3AO14802 1390 aaPredicted RBP10.43□□□□□ -0.74
LDHB-208ENST00000539782 SRPK2P78362 688 aaKnown RBP10.43□□□□□ -0.74
LDHB-208ENST00000539782 BARGINQ6ZT62 677 aa10.43□□□□□ -0.74
LDHB-208ENST00000539782 TCP11L2Q8N4U5 519 aa10.43□□□□□ -0.74
LDHB-208ENST00000539782 CAMKK2Q96RR4 588 aa10.43□□□□□ -0.74
LDHB-208ENST00000539782 PLEKHG3A1L390 1219 aa10.42□□□□□ -0.74
LDHB-208ENST00000539782 LARP1Q6PKG0 1096 aaKnown RBP10.42□□□□□ -0.74
LDHB-208ENST00000539782 NLRP13Q86W25 1043 aa10.42□□□□□ -0.74
LDHB-208ENST00000539782 PPIP5K1Q6PFW1 1433 aa10.41□□□□□ -0.74
LDHB-208ENST00000539782 PPP1R1BQ9UD71 204 aaPredicted RBP10.41□□□□□ -0.74
LDHB-208ENST00000539782 KIAA1210Q9ULL0 1709 aa10.41□□□□□ -0.74
LDHB-208ENST00000539782 CPDO75976 1380 aa10.4□□□□□ -0.74
LDHB-208ENST00000539782 USP19O94966 1318 aa10.4□□□□□ -0.74
LDHB-208ENST00000539782 CENPJQ9HC77 1338 aaPredicted RBP10.4□□□□□ -0.74
LDHB-208ENST00000539782 DCAF8L1A6NGE4 600 aa10.4□□□□□ -0.74
LDHB-208ENST00000539782 C11orf95C9JLR9 678 aaPredicted RBP10.4□□□□□ -0.74
LDHB-208ENST00000539782 THRAP3Q9Y2W1 955 aaKnown RBP10.4□□□□□ -0.74
LDHB-208ENST00000539782 CAMTA1Q9Y6Y1 1673 aa10.4□□□□□ -0.74
LDHB-208ENST00000539782 RREB1Q92766 1687 aa10.39□□□□□ -0.75
LDHB-208ENST00000539782 GCP02774 474 aa10.39□□□□□ -0.75
LDHB-208ENST00000539782 BRD4O60885 1362 aaPredicted RBP10.39□□□□□ -0.75
LDHB-208ENST00000539782 LMO7Q8WWI1 1683 aa10.38□□□□□ -0.75
LDHB-208ENST00000539782 COL5A2P05997 1499 aaPredicted RBP10.38□□□□□ -0.75
LDHB-208ENST00000539782 NLRP6P59044 892 aa10.38□□□□□ -0.75
LDHB-208ENST00000539782 CABP2Q9NPB3 220 aa10.38□□□□□ -0.75
LDHB-208ENST00000539782 OVOS2A0A0G2JMS6 1433 aa10.38□□□□□ -0.75
LDHB-208ENST00000539782 OVOS2A0A0J9YW53 1432 aa10.38□□□□□ -0.75
LDHB-208ENST00000539782 CRB1P82279 1406 aa10.38□□□□□ -0.75
LDHB-208ENST00000539782 OVOS2Q6IE36 1432 aa10.38□□□□□ -0.75
LDHB-208ENST00000539782 NUP188Q5SRE5 1749 aa10.38□□□□□ -0.75
LDHB-208ENST00000539782 NBPF1Q3BBV0 1214 aa10.37□□□□□ -0.75
LDHB-208ENST00000539782 TOM1L2Q6ZVM7 507 aa10.37□□□□□ -0.75
LDHB-208ENST00000539782 SPON1Q9HCB6 807 aa10.37□□□□□ -0.75
LDHB-208ENST00000539782 PARP4Q9UKK3 1724 aaKnown RBP10.36□□□□□ -0.75
LDHB-208ENST00000539782 DDB1Q16531 1140 aa10.36□□□□□ -0.75
LDHB-208ENST00000539782 QRICH2Q9H0J4 1663 aa10.35□□□□□ -0.75
LDHB-208ENST00000539782 USP6P35125 1406 aa10.35□□□□□ -0.75
LDHB-208ENST00000539782 KCNQ2O43526 872 aa10.35□□□□□ -0.75
LDHB-208ENST00000539782 YY1P25490 414 aa10.35□□□□□ -0.75
LDHB-208ENST00000539782 CABP1Q9NZU7 370 aa10.35□□□□□ -0.75
LDHB-208ENST00000539782 AATKQ6ZMQ8 1374 aa10.35□□□□□ -0.75
LDHB-208ENST00000539782 CSB-PGBD3P0DP91 1061 aa10.34□□□□□ -0.75
LDHB-208ENST00000539782 EVC2Q86UK5 1308 aa10.33□□□□□ -0.76
LDHB-208ENST00000539782 SLIT3O75094 1523 aa10.33□□□□□ -0.76
LDHB-208ENST00000539782 LRRC37A3O60309 1634 aa10.33□□□□□ -0.76
LDHB-208ENST00000539782 SOX12O15370 315 aa10.33□□□□□ -0.76
LDHB-208ENST00000539782 CDCA7Q9BWT1 371 aaPredicted RBP10.33□□□□□ -0.76
LDHB-208ENST00000539782 BCL11BQ9C0K0 894 aaPredicted RBP10.33□□□□□ -0.76
LDHB-208ENST00000539782 NINLQ9Y2I6 1382 aa10.33□□□□□ -0.76
LDHB-208ENST00000539782 WDR17Q8IZU2 1322 aa10.33□□□□□ -0.76
LDHB-208ENST00000539782 KCNH5Q8NCM2 988 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms