RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 ORAI2Q96SN7 254 aa21.88■■□□□ 1.09
TRAF3-204ENST00000539721 MRS2Q9HD23 443 aa21.88■■□□□ 1.09
TRAF3-204ENST00000539721 CCDC184Q52MB2 194 aa21.87■■□□□ 1.09
TRAF3-204ENST00000539721 NLRP13Q86W25 1043 aa21.87■■□□□ 1.09
TRAF3-204ENST00000539721 TTC21BQ7Z4L5 1316 aa21.86■■□□□ 1.09
TRAF3-204ENST00000539721 BRD4O60885 1362 aaPredicted RBP21.86■■□□□ 1.09
TRAF3-204ENST00000539721 PPP2R1AP30153 589 aa21.86■■□□□ 1.09
TRAF3-204ENST00000539721 SSH2Q76I76 1423 aa21.85■■□□□ 1.09
TRAF3-204ENST00000539721 NME9Q86XW9 330 aa21.84■■□□□ 1.09
TRAF3-204ENST00000539721 TTC21AQ8NDW8 1320 aa21.83■■□□□ 1.08
TRAF3-204ENST00000539721 TNNT2P45379 298 aaPredicted RBP21.82■■□□□ 1.08
TRAF3-204ENST00000539721 PSME1Q06323 249 aa21.81■■□□□ 1.08
TRAF3-204ENST00000539721 PIK3C2AO00443 1686 aa21.79■■□□□ 1.08
TRAF3-204ENST00000539721 COG3Q96JB2 828 aa21.79■■□□□ 1.08
TRAF3-204ENST00000539721 ZRANB1Q9UGI0 708 aa21.79■■□□□ 1.08
TRAF3-204ENST00000539721 FOXO3O43524 673 aa21.79■■□□□ 1.08
TRAF3-204ENST00000539721 PAK3O75914 559 aaPredicted RBP21.77■■□□□ 1.08
TRAF3-204ENST00000539721 SLAIN2Q9P270 581 aa21.77■■□□□ 1.08
TRAF3-204ENST00000539721 YTHDC1Q96MU7 727 aaKnown RBP21.76■■□□□ 1.07
TRAF3-204ENST00000539721 OVOS2A0A0J9YW53 1432 aa21.76■■□□□ 1.07
TRAF3-204ENST00000539721 OVOS2Q6IE36 1432 aa21.76■■□□□ 1.07
TRAF3-204ENST00000539721 TRPM3Q9HCF6 1732 aaPredicted RBP21.76■■□□□ 1.07
TRAF3-204ENST00000539721 SCAF1Q9H7N4 1312 aaKnown RBP21.75■■□□□ 1.07
TRAF3-204ENST00000539721 USP54Q70EL1 1684 aa21.75■■□□□ 1.07
TRAF3-204ENST00000539721 XPCQ01831 940 aaPredicted RBP21.74■■□□□ 1.07
TRAF3-204ENST00000539721 KRT28Q7Z3Y7 464 aa21.74■■□□□ 1.07
TRAF3-204ENST00000539721 FAM9BQ8IZU0 186 aa21.74■■□□□ 1.07
TRAF3-204ENST00000539721 BRINP3Q76B58 766 aa21.74■■□□□ 1.07
TRAF3-204ENST00000539721 USP31Q70CQ4 1352 aa21.73■■□□□ 1.07
TRAF3-204ENST00000539721 MAP2P11137 1827 aaKnown RBP21.73■■□□□ 1.07
TRAF3-204ENST00000539721 ABTB2Q8N961 1025 aa21.73■■□□□ 1.07
TRAF3-204ENST00000539721 NPHP3Q7Z494 1330 aa21.72■■□□□ 1.07
TRAF3-204ENST00000539721 MARF1Q9Y4F3 1742 aaKnown RBP21.72■■□□□ 1.07
TRAF3-204ENST00000539721 MTHFSP49914 203 aa21.71■■□□□ 1.07
TRAF3-204ENST00000539721 PNISRQ8TF01 805 aaKnown RBP21.71■■□□□ 1.07
TRAF3-204ENST00000539721 NLRP6P59044 892 aa21.71■■□□□ 1.07
TRAF3-204ENST00000539721 DDX17Q92841 729 aaKnown RBP21.7■■□□□ 1.06
TRAF3-204ENST00000539721 AATKQ6ZMQ8 1374 aa21.69■■□□□ 1.06
TRAF3-204ENST00000539721 NUTM2GQ5VZR2 741 aa21.69■■□□□ 1.06
TRAF3-204ENST00000539721 ALS2Q96Q42 1657 aa21.68■■□□□ 1.06
TRAF3-204ENST00000539721 CFAP53Q96M91 514 aa21.68■■□□□ 1.06
TRAF3-204ENST00000539721 PXDNQ92626 1479 aa21.68■■□□□ 1.06
TRAF3-204ENST00000539721 FBLN1P23142 703 aa21.67■■□□□ 1.06
TRAF3-204ENST00000539721 NHSL1Q5SYE7 1610 aa21.66■■□□□ 1.06
TRAF3-204ENST00000539721 SBNO1A3KN83 1393 aa21.66■■□□□ 1.06
TRAF3-204ENST00000539721 LMOD2Q6P5Q4 547 aa21.66■■□□□ 1.06
TRAF3-204ENST00000539721 POLKQ9UBT6 870 aa21.66■■□□□ 1.06
TRAF3-204ENST00000539721 ROBO1Q9Y6N7 1651 aa21.65■■□□□ 1.06
TRAF3-204ENST00000539721 SMG6Q86US8 1419 aaKnown RBP21.65■■□□□ 1.06
TRAF3-204ENST00000539721 SOX12O15370 315 aa21.64■■□□□ 1.06
TRAF3-204ENST00000539721 SHPRHQ149N8 1683 aa21.64■■□□□ 1.05
TRAF3-204ENST00000539721 WDR43Q15061 677 aaKnown RBP eCLIP21.64■■□□□ 1.05
TRAF3-204ENST00000539721 EMILIN1Q9Y6C2 1016 aa21.64■■□□□ 1.05
TRAF3-204ENST00000539721 TNS3Q68CZ2 1445 aa21.63■■□□□ 1.05
TRAF3-204ENST00000539721 PPM1GO15355 546 aaPredicted RBP21.63■■□□□ 1.05
TRAF3-204ENST00000539721 RRS1Q15050 365 aaKnown RBP21.63■■□□□ 1.05
TRAF3-204ENST00000539721 COL3A1P02461 1466 aaPredicted RBP21.61■■□□□ 1.05
TRAF3-204ENST00000539721 CDK12Q9NYV4 1490 aaPredicted RBP21.61■■□□□ 1.05
TRAF3-204ENST00000539721 IQSEC2Q5JU85 1478 aa21.6■■□□□ 1.05
TRAF3-204ENST00000539721 SOS2Q07890 1332 aaPredicted RBP21.6■■□□□ 1.05
TRAF3-204ENST00000539721 SLIT3O75094 1523 aa21.6■■□□□ 1.05
TRAF3-204ENST00000539721 PNPLA6Q8IY17 1366 aa21.59■■□□□ 1.05
TRAF3-204ENST00000539721 SPATA31A3Q5VYP0 1347 aa21.59■■□□□ 1.05
TRAF3-204ENST00000539721 PEAK1Q9H792 1746 aa21.59■■□□□ 1.05
TRAF3-204ENST00000539721 TOM1O60784 492 aa21.59■■□□□ 1.05
TRAF3-204ENST00000539721 INSRP06213 1382 aa21.58■■□□□ 1.05
TRAF3-204ENST00000539721 KCNH5Q8NCM2 988 aa21.58■■□□□ 1.04
TRAF3-204ENST00000539721 NFAT5O94916 1531 aa21.58■■□□□ 1.04
TRAF3-204ENST00000539721 LTN1O94822 1766 aa21.58■■□□□ 1.04
TRAF3-204ENST00000539721 ARHGEF10O15013 1369 aa21.57■■□□□ 1.04
TRAF3-204ENST00000539721 USP19O94966 1318 aa21.57■■□□□ 1.04
TRAF3-204ENST00000539721 ADAMTS8Q9UP79 889 aa21.57■■□□□ 1.04
TRAF3-204ENST00000539721 MAP3K19Q56UN5 1328 aa21.57■■□□□ 1.04
TRAF3-204ENST00000539721 PLEKHG5O94827 1062 aa21.56■■□□□ 1.04
TRAF3-204ENST00000539721 HNRNPUQ00839 825 aaKnown RBP eCLIP21.56■■□□□ 1.04
TRAF3-204ENST00000539721 AHDC1Q5TGY3 1603 aaPredicted RBP21.56■■□□□ 1.04
TRAF3-204ENST00000539721 MED1Q15648 1581 aaPredicted RBP21.56■■□□□ 1.04
TRAF3-204ENST00000539721 PHRF1Q9P1Y6 1649 aaKnown RBP21.56■■□□□ 1.04
TRAF3-204ENST00000539721 DIAPH1O60610 1272 aaKnown RBP21.56■■□□□ 1.04
TRAF3-204ENST00000539721 NUDCQ9Y266 331 aa21.55■■□□□ 1.04
TRAF3-204ENST00000539721 CRYBG1Q9Y4K1 1723 aa21.54■■□□□ 1.04
TRAF3-204ENST00000539721 BLMP54132 1417 aaPredicted RBP21.54■■□□□ 1.04
TRAF3-204ENST00000539721 CERKQ8TCT0 537 aa21.53■■□□□ 1.04
TRAF3-204ENST00000539721 UBAP1LF5GYI3 381 aa21.53■■□□□ 1.04
TRAF3-204ENST00000539721 GCP02774 474 aa21.53■■□□□ 1.04
TRAF3-204ENST00000539721 AMPHP49418 695 aa21.53■■□□□ 1.04
TRAF3-204ENST00000539721 FLT4P35916 1363 aa21.53■■□□□ 1.04
TRAF3-204ENST00000539721 KIF24Q5T7B8 1368 aa21.51■■□□□ 1.03
TRAF3-204ENST00000539721 U2SURPO15042 1029 aaKnown RBP21.51■■□□□ 1.03
TRAF3-204ENST00000539721 PIP4K2BP78356 416 aa21.51■■□□□ 1.03
TRAF3-204ENST00000539721 PHLPP1O60346 1717 aa21.51■■□□□ 1.03
TRAF3-204ENST00000539721 RTL1A6NKG5 1358 aa21.5■■□□□ 1.03
TRAF3-204ENST00000539721 U2AF1L5P0DN76 240 aaPredicted RBP21.5■■□□□ 1.03
TRAF3-204ENST00000539721 U2AF1Q01081 240 aaKnown RBP eCLIP21.5■■□□□ 1.03
TRAF3-204ENST00000539721 ZBTB7CA1YPR0 619 aa21.49■■□□□ 1.03
TRAF3-204ENST00000539721 HSP90AB2PQ58FF8 381 aa21.48■■□□□ 1.03
TRAF3-204ENST00000539721 HOXC9P31274 260 aa21.48■■□□□ 1.03
TRAF3-204ENST00000539721 IL13P35225 146 aa21.48■■□□□ 1.03
TRAF3-204ENST00000539721 CABLES1Q8TDN4 633 aa21.48■■□□□ 1.03
TRAF3-204ENST00000539721 ABCA3Q99758 1704 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms